| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mntH [H]
Identifier: 238026455
GI number: 238026455
Start: 856689
End: 857993
Strand: Direct
Name: mntH [H]
Synonym: bglu_1g07970
Alternate gene names: 238026455
Gene position: 856689-857993 (Clockwise)
Preceding gene: 238026454
Following gene: 238026459
Centisome position: 21.93
GC content: 69.43
Gene sequence:
>1305_bases ATGCTGATGGCAATCAAACGAACCGCCGGCTATGCCCTGTCCGGCACGGCGACCACCGACACCGTGAGCGCGATGCGCGA GGTGCTCGACCACCGGCGCCGCGGCGCTCGCGCGCTGCTGTCGTTCGCCGGGCCGGCCGTGATCGCCTCGGTCGGCTACA TGGACCCGGGCAACTTCGCCACCAACATCCAGGCCGGCTCGACCTACGGCTATGAGCTGCTGTGGGTGGTGCTGCTGTCT TCGCTGGTGGCGATGCTGTTCCAGGCGATGTCGGCCAAGCTCGGCATCGTCACCGGGCGCAGCCTCGCCGAACTCTGCCG CGAGGCCTTCCCGAAGCCGCTCGTGATCGGCATGTGGGTCGGCTCCGAGATCGCGGCGATGGCCACCGACCTGGCCGAGT TCATGGGCGCCGCGATGGGCATCGCGCTGCTGTTCCATCTCGCGATCGGCTGGGGGCTCGCGATCACGGGCGTGGTCACG ATCGGCATCCTGTCGCTCGACGCGCGCGGCTTCCGCCCGCTCGAGATCGTGATCGCGGCGCTGATCACGGTGATCGGCCT GAGCTACCTGGGCGAACTCGTGATCGCGCCGCCCGACTGGCACGCCGCGATCTTCCACACCCTCGTGCCGCATCTGCACG GTAGCGAGGCGCTGATGCTGGCCGTGGGCATCGTCGGCGCCACCATCATGCCGCACACCATCTATCTGCACTCGGGCCTC ACGCAGAACCGCGCGCCGGCCCGCAACGACCAGCAGCGCCGGCGCCTGGTGCGCTTCTCGAACCGCGAGGTGGCGATCGC GCTCGGCTTCGCCGGCTTCGTGAACCTCGCGATGGTGGCGATGTCGGCCTCGGTGTTTCGCGAGCATGCGCCCGGCATCT CCGACATCACGGCCGCCTATCACACGCTGACGCCCGTGCTCGGCACCGGCGCGGCCGCGCTGTTCCTGGTCTCGCTGCTG GCCTCGGGCATTTCCAGCTCGGTGGTGGGAACCCTGGCCGGCCAGTCGATCATGCAGGGCTTCGTCGGCATGCGCATGCC GGTGATGGCGCGCCGCCTCGTCACGATGGTGCCGGCGGTGGTGGTCTGCCTGACCTGCAATCCGATGCGCGCCATGATCG ACAGCCAGATCGTGCTGAGCCTGGTCCTGCCGGTGCCGCTCGTCGCGCTGGTGGTGCTGTCGGCGCGCCGCTCAGTGATG GGTCGATTCGTGGCGGGCCGCGGGTTGCTGGTTGCCGCCGGCCTCGCCACCGGCGTGATCGTGGTCCTGAACGCGATGCT GATCTGGCAGGCCGTCGTCGCGTAG
Upstream 100 bases:
>100_bases GCGAACCCGCCGCACGGCGCGCCACCGCATTCGAGGCTGCCGCGCGGCGGATTCGGAATCCCTTGTCGAGACCCGGCCAT GCCGGGAAGAGGCCCTCATC
Downstream 100 bases:
>100_bases CAGCGCGCGCGTGCGCAGCGCCACCTCGAGCCCGGCGCTGCCGGCGACCATCGGCCGAGCAGACGGAGCAGCGAGCGGCT GGCGCTGACGATCCATGCCC
Product: NRAMP family Mn2 and Fe2 transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MLMAIKRTAGYALSGTATTDTVSAMREVLDHRRRGARALLSFAGPAVIASVGYMDPGNFATNIQAGSTYGYELLWVVLLS SLVAMLFQAMSAKLGIVTGRSLAELCREAFPKPLVIGMWVGSEIAAMATDLAEFMGAAMGIALLFHLAIGWGLAITGVVT IGILSLDARGFRPLEIVIAALITVIGLSYLGELVIAPPDWHAAIFHTLVPHLHGSEALMLAVGIVGATIMPHTIYLHSGL TQNRAPARNDQQRRRLVRFSNREVAIALGFAGFVNLAMVAMSASVFREHAPGISDITAAYHTLTPVLGTGAAALFLVSLL ASGISSSVVGTLAGQSIMQGFVGMRMPVMARRLVTMVPAVVVCLTCNPMRAMIDSQIVLSLVLPVPLVALVVLSARRSVM GRFVAGRGLLVAAGLATGVIVVLNAMLIWQAVVA
Sequences:
>Translated_434_residues MLMAIKRTAGYALSGTATTDTVSAMREVLDHRRRGARALLSFAGPAVIASVGYMDPGNFATNIQAGSTYGYELLWVVLLS SLVAMLFQAMSAKLGIVTGRSLAELCREAFPKPLVIGMWVGSEIAAMATDLAEFMGAAMGIALLFHLAIGWGLAITGVVT IGILSLDARGFRPLEIVIAALITVIGLSYLGELVIAPPDWHAAIFHTLVPHLHGSEALMLAVGIVGATIMPHTIYLHSGL TQNRAPARNDQQRRRLVRFSNREVAIALGFAGFVNLAMVAMSASVFREHAPGISDITAAYHTLTPVLGTGAAALFLVSLL ASGISSSVVGTLAGQSIMQGFVGMRMPVMARRLVTMVPAVVVCLTCNPMRAMIDSQIVLSLVLPVPLVALVVLSARRSVM GRFVAGRGLLVAAGLATGVIVVLNAMLIWQAVVA >Mature_434_residues MLMAIKRTAGYALSGTATTDTVSAMREVLDHRRRGARALLSFAGPAVIASVGYMDPGNFATNIQAGSTYGYELLWVVLLS SLVAMLFQAMSAKLGIVTGRSLAELCREAFPKPLVIGMWVGSEIAAMATDLAEFMGAAMGIALLFHLAIGWGLAITGVVT IGILSLDARGFRPLEIVIAALITVIGLSYLGELVIAPPDWHAAIFHTLVPHLHGSEALMLAVGIVGATIMPHTIYLHSGL TQNRAPARNDQQRRRLVRFSNREVAIALGFAGFVNLAMVAMSASVFREHAPGISDITAAYHTLTPVLGTGAAALFLVSLL ASGISSSVVGTLAGQSIMQGFVGMRMPVMARRLVTMVPAVVVCLTCNPMRAMIDSQIVLSLVLPVPLVALVVLSARRSVM GRFVAGRGLLVAAGLATGVIVVLNAMLIWQAVVA
Specific function: H(+)-stimulated, highly selective, manganese uptake system [H]
COG id: COG1914
COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NRAMP family [H]
Homologues:
Organism=Homo sapiens, GI109255241, Length=363, Percent_Identity=35.2617079889807, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI295293167, Length=432, Percent_Identity=34.4907407407407, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI295293171, Length=432, Percent_Identity=34.4907407407407, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI295293169, Length=432, Percent_Identity=34.4907407407407, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI295293178, Length=432, Percent_Identity=34.4907407407407, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI295293175, Length=432, Percent_Identity=34.4907407407407, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI295293173, Length=432, Percent_Identity=34.4907407407407, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI10835169, Length=432, Percent_Identity=34.4907407407407, Blast_Score=179, Evalue=6e-45, Organism=Escherichia coli, GI1788736, Length=398, Percent_Identity=45.7286432160804, Blast_Score=315, Evalue=3e-87, Organism=Caenorhabditis elegans, GI17569473, Length=396, Percent_Identity=31.3131313131313, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI193210616, Length=430, Percent_Identity=30.6976744186047, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71999499, Length=441, Percent_Identity=28.1179138321995, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI71993856, Length=225, Percent_Identity=35.5555555555556, Blast_Score=138, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6323062, Length=407, Percent_Identity=30.958230958231, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6324450, Length=448, Percent_Identity=28.5714285714286, Blast_Score=172, Evalue=7e-44, Organism=Saccharomyces cerevisiae, GI6321841, Length=409, Percent_Identity=32.0293398533007, Blast_Score=171, Evalue=2e-43, Organism=Drosophila melanogaster, GI24648607, Length=433, Percent_Identity=31.8706697459584, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI281362176, Length=433, Percent_Identity=31.8706697459584, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI24648609, Length=433, Percent_Identity=31.8706697459584, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI45553443, Length=411, Percent_Identity=32.360097323601, Blast_Score=191, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023056 - InterPro: IPR001046 [H]
Pfam domain/function: PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 45618; Mature: 45618
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMAIKRTAGYALSGTATTDTVSAMREVLDHRRRGARALLSFAGPAVIASVGYMDPGNFA CCEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC TNIQAGSTYGYELLWVVLLSSLVAMLFQAMSAKLGIVTGRSLAELCREAFPKPLVIGMWV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEECCHHHHHHHHHHCCCCEEEEEEC GSEIAAMATDLAEFMGAAMGIALLFHLAIGWGLAITGVVTIGILSLDARGFRPLEIVIAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHH LITVIGLSYLGELVIAPPDWHAAIFHTLVPHLHGSEALMLAVGIVGATIMPHTIYLHSGL HHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEECCC TQNRAPARNDQQRRRLVRFSNREVAIALGFAGFVNLAMVAMSASVFREHAPGISDITAAY CCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HTLTPVLGTGAAALFLVSLLASGISSSVVGTLAGQSIMQGFVGMRMPVMARRLVTMVPAV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VVCLTCNPMRAMIDSQIVLSLVLPVPLVALVVLSARRSVMGRFVAGRGLLVAAGLATGVI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VVLNAMLIWQAVVA HHHHHHHHHHHHHC >Mature Secondary Structure MLMAIKRTAGYALSGTATTDTVSAMREVLDHRRRGARALLSFAGPAVIASVGYMDPGNFA CCEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC TNIQAGSTYGYELLWVVLLSSLVAMLFQAMSAKLGIVTGRSLAELCREAFPKPLVIGMWV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEECCHHHHHHHHHHCCCCEEEEEEC GSEIAAMATDLAEFMGAAMGIALLFHLAIGWGLAITGVVTIGILSLDARGFRPLEIVIAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHH LITVIGLSYLGELVIAPPDWHAAIFHTLVPHLHGSEALMLAVGIVGATIMPHTIYLHSGL HHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEECCC TQNRAPARNDQQRRRLVRFSNREVAIALGFAGFVNLAMVAMSASVFREHAPGISDITAAY CCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HTLTPVLGTGAAALFLVSLLASGISSSVVGTLAGQSIMQGFVGMRMPVMARRLVTMVPAV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VVCLTCNPMRAMIDSQIVLSLVLPVPLVALVVLSARRSVMGRFVAGRGLLVAAGLATGVI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VVLNAMLIWQAVVA HHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA