| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is tatA [H]
Identifier: 238026453
GI number: 238026453
Start: 854770
End: 854982
Strand: Reverse
Name: tatA [H]
Synonym: bglu_1g07950
Alternate gene names: 238026453
Gene position: 854982-854770 (Counterclockwise)
Preceding gene: 238026456
Following gene: 238026452
Centisome position: 21.89
GC content: 69.48
Gene sequence:
>213_bases ATGGGTAGCCTCAGCATCACGCACTGGCTGATCGTTCTGGCAATCGTCTCGCTCGTGTTCGGAACCACGAAGCTGCGCAG CCTCGGCTCGGATCTCGGCGGCGCCATCAAGGGCTTCAAGGCGGGCATGCAGGACGGCGAGGCGCCGGAGAGCGCCGACG CCAAGGCGGGGACGACGCGGGACGCGCGGACGGGCCGGCCGGTCTCGCAGTGA
Upstream 100 bases:
>100_bases CCGGCGCGATCGCGCTTAGGATCGGCGCACGCGCTGGTTCATCGGGCCGGCGCCCGACGCGCCCACCGGGTGCACTCACC AACCACGCAAGGAGCAGATC
Downstream 100 bases:
>100_bases AACGGGGCTCGCGGTATCGGACAGGTGCAGGTACCGGGCGGGCAACGGACAGGCAGCGGGTGGTGCGGGCACGGCTGCGG CGCCGCAGCCCGTCCAGCCC
Product: Twin-arginine translocation protein, TatA/E family subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MGSLSITHWLIVLAIVSLVFGTTKLRSLGSDLGGAIKGFKAGMQDGEAPESADAKAGTTRDARTGRPVSQ
Sequences:
>Translated_70_residues MGSLSITHWLIVLAIVSLVFGTTKLRSLGSDLGGAIKGFKAGMQDGEAPESADAKAGTTRDARTGRPVSQ >Mature_69_residues GSLSITHWLIVLAIVSLVFGTTKLRSLGSDLGGAIKGFKAGMQDGEAPESADAKAGTTRDARTGRPVSQ
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003369 - InterPro: IPR006312 [H]
Pfam domain/function: PF02416 MttA_Hcf106 [H]
EC number: NA
Molecular weight: Translated: 7201; Mature: 7070
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLSITHWLIVLAIVSLVFGTTKLRSLGSDLGGAIKGFKAGMQDGEAPESADAKAGTTR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC DARTGRPVSQ CCCCCCCCCC >Mature Secondary Structure GSLSITHWLIVLAIVSLVFGTTKLRSLGSDLGGAIKGFKAGMQDGEAPESADAKAGTTR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC DARTGRPVSQ CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA