| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026440
Identifier: 238026440
GI number: 238026440
Start: 840699
End: 841457
Strand: Direct
Name: 238026440
Synonym: bglu_1g07800
Alternate gene names: NA
Gene position: 840699-841457 (Clockwise)
Preceding gene: 238026439
Following gene: 238026441
Centisome position: 21.52
GC content: 51.52
Gene sequence:
>759_bases ATGAAAATAGAAAGCACTTCATCCGCGTCGACGCGTTTGTTAAAAGGTCGGATTCGTAACCTGCGAAAGACGCGCCGGAA TCAGGACTTCTTTTTTTCAGCTGCTGACCGCGCCAGAATGGGCGCGACAGCGATTGCCGCTGGGCTTGGCGGTCTGGGCG GCGTCGCCACCGGCCTCAGTGGTATGGCCATGGATACGACGGAAGAGGCGGACTTGCTCGAGTTTGATCTAGATGGAGAA GCCATACGGGCTTGGGTATGGCGGTCCGTCTTTAGTGAGGACGATGAGGTTCAGGTCGTAGCAGAGTGGACCGAAACGCA TTGGCAGGGGTATGGTCTATACCGGCCAAGTGACGCCATCGTCGCGTTGCATCCCCATTGTTCGCGTGGGCGCTACGCCC ACTACCGGGCGGCATTCAGTATATATTTGAAATGTATGATCCCGCTGATTATTGCCGCTTTTGGAATGCTATTCATAGCA GGTTATTCGATGGATGGTAGTAAATCGTTGATGGTATTGTGGAGTGCTCTTCCGACTATTATGGTTGGCGTGCTGGCGGC TTCGGCAATATACGGTTTTATTGCTTACCGTGTTACCCGAAAGATGATGGGTTTCGTGAAATTAGCAGAAGGCATTTTTG AAGGCTTCGGGTGGTGCAACGTCAAGTTCATCGACCTCCCGGCAATTACAAAGAAGAATAAGAAGCCGGGAGATCCAGCC GTGCTTGGTGTACTTTATTTTCGATATCACGATGAATAG
Upstream 100 bases:
>100_bases GTAGTTCGCTGAACTCCCCACCATGGGAAGCAGGAGAACAGCATGAAAAACTCGAGAAGGCGCTGGGATCGTTGAGCCTT CAGGCTGGAGAGGGTTCTGA
Downstream 100 bases:
>100_bases GTGGAATAGAGAATGAGCCTGTCTGGCATTGATCCTTCTCCGACGCGTCTGCTGAAAGGTTGCATCCACAACCTGCGCAA AGCTCGACGGAAACAGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKIESTSSASTRLLKGRIRNLRKTRRNQDFFFSAADRARMGATAIAAGLGGLGGVATGLSGMAMDTTEEADLLEFDLDGE AIRAWVWRSVFSEDDEVQVVAEWTETHWQGYGLYRPSDAIVALHPHCSRGRYAHYRAAFSIYLKCMIPLIIAAFGMLFIA GYSMDGSKSLMVLWSALPTIMVGVLAASAIYGFIAYRVTRKMMGFVKLAEGIFEGFGWCNVKFIDLPAITKKNKKPGDPA VLGVLYFRYHDE
Sequences:
>Translated_252_residues MKIESTSSASTRLLKGRIRNLRKTRRNQDFFFSAADRARMGATAIAAGLGGLGGVATGLSGMAMDTTEEADLLEFDLDGE AIRAWVWRSVFSEDDEVQVVAEWTETHWQGYGLYRPSDAIVALHPHCSRGRYAHYRAAFSIYLKCMIPLIIAAFGMLFIA GYSMDGSKSLMVLWSALPTIMVGVLAASAIYGFIAYRVTRKMMGFVKLAEGIFEGFGWCNVKFIDLPAITKKNKKPGDPA VLGVLYFRYHDE >Mature_252_residues MKIESTSSASTRLLKGRIRNLRKTRRNQDFFFSAADRARMGATAIAAGLGGLGGVATGLSGMAMDTTEEADLLEFDLDGE AIRAWVWRSVFSEDDEVQVVAEWTETHWQGYGLYRPSDAIVALHPHCSRGRYAHYRAAFSIYLKCMIPLIIAAFGMLFIA GYSMDGSKSLMVLWSALPTIMVGVLAASAIYGFIAYRVTRKMMGFVKLAEGIFEGFGWCNVKFIDLPAITKKNKKPGDPA VLGVLYFRYHDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27921; Mature: 27921
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIESTSSASTRLLKGRIRNLRKTRRNQDFFFSAADRARMGATAIAAGLGGLGGVATGLS CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHCCC GMAMDTTEEADLLEFDLDGEAIRAWVWRSVFSEDDEVQVVAEWTETHWQGYGLYRPSDAI CCEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCEECCCCCE VALHPHCSRGRYAHYRAAFSIYLKCMIPLIIAAFGMLFIAGYSMDGSKSLMVLWSALPTI EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH MVGVLAASAIYGFIAYRVTRKMMGFVKLAEGIFEGFGWCNVKFIDLPAITKKNKKPGDPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHH VLGVLYFRYHDE HHHEEEEEEECC >Mature Secondary Structure MKIESTSSASTRLLKGRIRNLRKTRRNQDFFFSAADRARMGATAIAAGLGGLGGVATGLS CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHCCC GMAMDTTEEADLLEFDLDGEAIRAWVWRSVFSEDDEVQVVAEWTETHWQGYGLYRPSDAI CCEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCEECCCCCE VALHPHCSRGRYAHYRAAFSIYLKCMIPLIIAAFGMLFIAGYSMDGSKSLMVLWSALPTI EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH MVGVLAASAIYGFIAYRVTRKMMGFVKLAEGIFEGFGWCNVKFIDLPAITKKNKKPGDPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHH VLGVLYFRYHDE HHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA