Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026441

Identifier: 238026441

GI number: 238026441

Start: 843128

End: 843517

Strand: Direct

Name: 238026441

Synonym: bglu_1g07830

Alternate gene names: NA

Gene position: 843128-843517 (Clockwise)

Preceding gene: 238026440

Following gene: 238026442

Centisome position: 21.58

GC content: 60.77

Gene sequence:

>390_bases
ATGAAGAAGAGCCGGTTTACGGAAGAGCAGATGGTCACGATCCTGCGCGAGGCGGACAAGGCGCCGGTCGCCGAAGTGGC
GAAGAAGCATGGGATCAGCGAGCAGACGATCTACAACTGGCGTCAGCATTTCGGCGGGATGGACGCCGCTGATGTGAAGC
GCCTGAAGCAGTTGGAGCAGGAAAACGCACGATTGAAGAAGATGCTGGCCGAGCGTGATCTCGAACTCGACGTGATGAAG
GAGATCAACGCAAAAAATGGTGAGCGCGCCCGCTCGCCGTCAGCAGGTTGCCTACGCGAAAGCGCGTGGTCTGTCGGAGC
GGCGAGCGTGCGCGCTGATGTCGGTCGCGAGGTCGGCCCTGAATTACAAGTCGAGGCTGGCCGGGCGTGA

Upstream 100 bases:

>100_bases
ACTCCTGCAGAATGGTTTTGTGGAAACGCTCGTGACCTGCCCGGTGATTTTCGGACCAGTTGAAACTTGAGAGAATGGCT
TCCAATGGAGAAAGGAAGTC

Downstream 100 bases:

>100_bases
TGCGCCGGTGCTGGCGGCGATGTGTGTTCTATCGGCACAATATCCGCGCTACGGTTACCGTCGCATCCAGATTTTTCTGG
ATCGGCAAGGCCATCCGATG

Product: transposase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKKSRFTEEQMVTILREADKAPVAEVAKKHGISEQTIYNWRQHFGGMDAADVKRLKQLEQENARLKKMLAERDLELDVMK
EINAKNGERARSPSAGCLRESAWSVGAASVRADVGREVGPELQVEAGRA

Sequences:

>Translated_129_residues
MKKSRFTEEQMVTILREADKAPVAEVAKKHGISEQTIYNWRQHFGGMDAADVKRLKQLEQENARLKKMLAERDLELDVMK
EINAKNGERARSPSAGCLRESAWSVGAASVRADVGREVGPELQVEAGRA
>Mature_129_residues
MKKSRFTEEQMVTILREADKAPVAEVAKKHGISEQTIYNWRQHFGGMDAADVKRLKQLEQENARLKKMLAERDLELDVMK
EINAKNGERARSPSAGCLRESAWSVGAASVRADVGREVGPELQVEAGRA

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 14407; Mature: 14407

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSRFTEEQMVTILREADKAPVAEVAKKHGISEQTIYNWRQHFGGMDAADVKRLKQLEQ
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
ENARLKKMLAERDLELDVMKEINAKNGERARSPSAGCLRESAWSVGAASVRADVGREVGP
HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ELQVEAGRA
CCCCCCCCC
>Mature Secondary Structure
MKKSRFTEEQMVTILREADKAPVAEVAKKHGISEQTIYNWRQHFGGMDAADVKRLKQLEQ
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
ENARLKKMLAERDLELDVMKEINAKNGERARSPSAGCLRESAWSVGAASVRADVGREVGP
HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ELQVEAGRA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2544911 [H]