| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is braD [H]
Identifier: 238026428
GI number: 238026428
Start: 826010
End: 827623
Strand: Reverse
Name: braD [H]
Synonym: bglu_1g07630
Alternate gene names: 238026428
Gene position: 827623-826010 (Counterclockwise)
Preceding gene: 238026429
Following gene: 238026427
Centisome position: 21.19
GC content: 71.87
Gene sequence:
>1614_bases ATGACTCTGCGCCCCCTCCTGCGGCTGCTGCTGGTTTGCGCGGCATGCGCGCTCGGCAGCCCCGCCGCCTTCGCGCTCCA GGCCGCCGACGCGGCCGCGCTGGCCGGCGACGACTTCGACGCGAAGCTCGCCGCCATCGACCACCTCGCCGCGGCCGACG ACGCCGCGTCGGTCGCGCTGCTGCACGCGCTCGCCGACGGCGCCGCGCTCGCCACCGACAGCCGCAGGCTGCTGCTGCAG GCCGACGACGGCAGCACCCGCGACGCGCTCTCGGGCGCCGTGGTGCCGCCCGGCGACGCCCAGCCCGTCACGCTCAACAA CCTGCTGCGCAGCAAGGTCGCCGGCGCGCTGTCCGGCCTCGCGCTCGCCTCGCCCGATCTCGCCACCCGCACGGCCGCCA TCGACGCGCTGCTGAAGAATCCGGACGCCTCGGAAAAGCCGCTGATCGACCGTGCCCGCGCGAAGGAAACCGACCCCACG CTCAAGCACCGGCTCGACGCGCTGTGGGCGATCGCCGCGCTGCACGACGCCGATCCCGCCAAGCGCCTCGAGGCGGTGCA ACTGGTAGCCGCGCGCCACGATCTCGACATGATCGAGCAACTGCGCCCGCTGGTGGCCAAGCGGCCCGACGGCAGCGACG CCGAACCCGACGCGCGCGTGCGCGAGGCCGCCCAGCAGGGGCTCGACGCGCTGCACGCGCTGCAGGAGCGCGGCGAGCTC GCCAGCACGCTGTTCGCGGGGCTCTCGCTCGGCAGCGTGCTGCTGCTCGCCGCGCTGGGCCTCGCCATCACCTACGGCCT GATCGGCGTGATCAACATGGCGCACGGCGAATTCCTGATGATCGGCGCCTATGCCACCTACGTGGTGCAGACGCTGTTCC AGCGCTACGCGCCGGGCGCCTTCGACTGGTACCCGCTGGTGGCCATGCCGGCCTCGTTCGCGGCCGCCGCGCTCGTCGGC ATCGTGCTGGAGCGCAGCGTGCTGCGCCATCTCTACGGCCGTCCGCTCGAAACGCTGCTGGCCACCTTCGGCGTGAGCCT GATTTTGATCCAGGCCACGCGCATGATCTTCGGGGCGCAGAACGTGCAGGTGGCCAATCCCGCCTGGATGAGCGGCGGCG TGACGGTGATGCAGAACCTGATCCTGCCGTACAACCGCATCGTAATCCTCGCGTTCTCGCTGGCGGTGGTGGCGGTGGCC TGGGGCGTGCTGACCCGGACCCGGCTCGGCCTGTTCGTGCGCGCGGTCACGCAGAACCGCCGGATGGCCGCCTGCGTCGG CGTGAAGACGGCGCGCGTCGATGCCTATGCGTTCGCGTTCGGCGCCGGCATCGCCGGGCTCGGCGGCTGCGCGCTCTCGC AGATCGGCAACGTCGGCCCCGACCTCGGCCAGAACTACATCATCGATTCGTTCATGGCGGTGGTGCTCGGCGGCGTCGGC CAGATCGCCGGCACGGTGGTGGGCGGCTTCGGCCTCGGGCTCGTCAGCAAGGCCATCGAGCCGTTCTGGGGCGCCGTGCT CGCCAAGATCGCCGTGCTCGTGATGATCGTGCTGTTCATCCAGAAGCGCCCGCAGGGCATGTTCGCCCTGAAGGGCCGCA GCGCGGAGGCTTGA
Upstream 100 bases:
>100_bases CGCCGCCGCGCCGCCGCGCTCGCGTAACTCGCCACGCCGGGACCTGGGGCGCGCAGTCGGCGCCCTGTCCCGCGATGTCC TCGCTCGACGGATCCTGCTC
Downstream 100 bases:
>100_bases CGCGATGACTTCGATCACCTCCTCCCCGCTGGCACCGGCCACGGTGCCCACGCCCGCGCCCGCCGGCGCGCCCGGCTTCG CGCTCGGCCTGCCGCCGCGC
Product: Branched-chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MTLRPLLRLLLVCAACALGSPAAFALQAADAAALAGDDFDAKLAAIDHLAAADDAASVALLHALADGAALATDSRRLLLQ ADDGSTRDALSGAVVPPGDAQPVTLNNLLRSKVAGALSGLALASPDLATRTAAIDALLKNPDASEKPLIDRARAKETDPT LKHRLDALWAIAALHDADPAKRLEAVQLVAARHDLDMIEQLRPLVAKRPDGSDAEPDARVREAAQQGLDALHALQERGEL ASTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQTLFQRYAPGAFDWYPLVAMPASFAAAALVG IVLERSVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVANPAWMSGGVTVMQNLILPYNRIVILAFSLAVVAVA WGVLTRTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAFGAGIAGLGGCALSQIGNVGPDLGQNYIIDSFMAVVLGGVG QIAGTVVGGFGLGLVSKAIEPFWGAVLAKIAVLVMIVLFIQKRPQGMFALKGRSAEA
Sequences:
>Translated_537_residues MTLRPLLRLLLVCAACALGSPAAFALQAADAAALAGDDFDAKLAAIDHLAAADDAASVALLHALADGAALATDSRRLLLQ ADDGSTRDALSGAVVPPGDAQPVTLNNLLRSKVAGALSGLALASPDLATRTAAIDALLKNPDASEKPLIDRARAKETDPT LKHRLDALWAIAALHDADPAKRLEAVQLVAARHDLDMIEQLRPLVAKRPDGSDAEPDARVREAAQQGLDALHALQERGEL ASTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQTLFQRYAPGAFDWYPLVAMPASFAAAALVG IVLERSVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVANPAWMSGGVTVMQNLILPYNRIVILAFSLAVVAVA WGVLTRTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAFGAGIAGLGGCALSQIGNVGPDLGQNYIIDSFMAVVLGGVG QIAGTVVGGFGLGLVSKAIEPFWGAVLAKIAVLVMIVLFIQKRPQGMFALKGRSAEA >Mature_536_residues TLRPLLRLLLVCAACALGSPAAFALQAADAAALAGDDFDAKLAAIDHLAAADDAASVALLHALADGAALATDSRRLLLQA DDGSTRDALSGAVVPPGDAQPVTLNNLLRSKVAGALSGLALASPDLATRTAAIDALLKNPDASEKPLIDRARAKETDPTL KHRLDALWAIAALHDADPAKRLEAVQLVAARHDLDMIEQLRPLVAKRPDGSDAEPDARVREAAQQGLDALHALQERGELA STLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQTLFQRYAPGAFDWYPLVAMPASFAAAALVGI VLERSVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQNVQVANPAWMSGGVTVMQNLILPYNRIVILAFSLAVVAVAW GVLTRTRLGLFVRAVTQNRRMAACVGVKTARVDAYAFAFGAGIAGLGGCALSQIGNVGPDLGQNYIIDSFMAVVLGGVGQ IAGTVVGGFGLGLVSKAIEPFWGAVLAKIAVLVMIVLFIQKRPQGMFALKGRSAEA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=314, Percent_Identity=28.343949044586, Blast_Score=87, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 56003; Mature: 55872
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRPLLRLLLVCAACALGSPAAFALQAADAAALAGDDFDAKLAAIDHLAAADDAASVAL CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHH LHALADGAALATDSRRLLLQADDGSTRDALSGAVVPPGDAQPVTLNNLLRSKVAGALSGL HHHHHCCCCEECCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALASPDLATRTAAIDALLKNPDASEKPLIDRARAKETDPTLKHRLDALWAIAALHDADPA HHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHH KRLEAVQLVAARHDLDMIEQLRPLVAKRPDGSDAEPDARVREAAQQGLDALHALQERGEL HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ASTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQTLFQRYAPGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCC FDWYPLVAMPASFAAAALVGIVLERSVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQ CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC NVQVANPAWMSGGVTVMQNLILPYNRIVILAFSLAVVAVAWGVLTRTRLGLFVRAVTQNR CCEECCCCHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RMAACVGVKTARVDAYAFAFGAGIAGLGGCALSQIGNVGPDLGQNYIIDSFMAVVLGGVG CCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHH QIAGTVVGGFGLGLVSKAIEPFWGAVLAKIAVLVMIVLFIQKRPQGMFALKGRSAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC >Mature Secondary Structure TLRPLLRLLLVCAACALGSPAAFALQAADAAALAGDDFDAKLAAIDHLAAADDAASVAL CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHH LHALADGAALATDSRRLLLQADDGSTRDALSGAVVPPGDAQPVTLNNLLRSKVAGALSGL HHHHHCCCCEECCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALASPDLATRTAAIDALLKNPDASEKPLIDRARAKETDPTLKHRLDALWAIAALHDADPA HHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHH KRLEAVQLVAARHDLDMIEQLRPLVAKRPDGSDAEPDARVREAAQQGLDALHALQERGEL HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ASTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQTLFQRYAPGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCC FDWYPLVAMPASFAAAALVGIVLERSVLRHLYGRPLETLLATFGVSLILIQATRMIFGAQ CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC NVQVANPAWMSGGVTVMQNLILPYNRIVILAFSLAVVAVAWGVLTRTRLGLFVRAVTQNR CCEECCCCHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RMAACVGVKTARVDAYAFAFGAGIAGLGGCALSQIGNVGPDLGQNYIIDSFMAVVLGGVG CCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHH QIAGTVVGGFGLGLVSKAIEPFWGAVLAKIAVLVMIVLFIQKRPQGMFALKGRSAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]