| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ureE [H]
Identifier: 238026419
GI number: 238026419
Start: 818371
End: 819084
Strand: Reverse
Name: ureE [H]
Synonym: bglu_1g07540
Alternate gene names: 238026419
Gene position: 819084-818371 (Counterclockwise)
Preceding gene: 238026420
Following gene: 238026418
Centisome position: 20.97
GC content: 75.21
Gene sequence:
>714_bases ATGCGCACGCTCGACAAACGCATCGCCCCCCCCGTCAGGCTCGCCGCGTCGCTGGTGGCGCGCGCGCCCACCCTCACGCT CGCCTACGACGCACGCTGCAGGAGCCGCTTCGCGGCCACCCTCGACTCGGGCGAGGAGCTCGGCGTGGTGCTGCCGCGCG GCACCGTGCTCGCCGACGGCGACGTGCTGGTGGCCGACGACGGCGGCCTGGTGCGGATCGTCGCCGCCGCCGAGGCGGTG CTGCTGGTGCGCGCGCCCGACGCGCTGACCCTCACGCGCGCCGCCTACCACCTCGGCAACCGCCACACGCCGGTCGAGAT CGGCACGCACACGCTCAAGCTCGAATACGATCCGGTGCTGGCCGACATGCTGACCCGGCTCGGCGCGCGCGTCGAACGCG TCGAGGCGCCGTTCCAGCCCGAGGCGGGCGCCTATGGCGGCGGCCACCGGCACGGCCACGACGCCACCTTCGCCGAGGAC TACGCGCTCGCGCAGCAGGTGTATGGCGAGCATCACGGGCACGCGCATTCGCACGGCGGCCACGGCCACCCGCACGCCCA CGACCACCCGCATTCACACGATGGTCACGCCTGCGGCCACGATCACCCGCGCGACCACGCGCACGATCCCGCAGCCGGGC AGGACCCGGCCGGCGCCGGCGGCCATCGCCACGGCCCCGCCTGCACGCACCGGCACGGCCATGGACACGGCTGA
Upstream 100 bases:
>100_bases CCCGAGACCTACGACGTGGTGGCCAACGGCCAGCTGCTGACCTGCGAGCCCGCCACCGTGCTGCCGATGGCGCAGCGTTA TTTCCTGTTCTGACCACTCC
Downstream 100 bases:
>100_bases GCTCGTCGCGCTGCTGCATCTGGCCTCGCCGGCGCTGCCGATCGGCGCGTTCAGCTATTCGCAGGGCTTCGAGGCCGCGC TCGACGCGAACCTGATCCAC
Product: urease accessory protein UreE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MRTLDKRIAPPVRLAASLVARAPTLTLAYDARCRSRFAATLDSGEELGVVLPRGTVLADGDVLVADDGGLVRIVAAAEAV LLVRAPDALTLTRAAYHLGNRHTPVEIGTHTLKLEYDPVLADMLTRLGARVERVEAPFQPEAGAYGGGHRHGHDATFAED YALAQQVYGEHHGHAHSHGGHGHPHAHDHPHSHDGHACGHDHPRDHAHDPAAGQDPAGAGGHRHGPACTHRHGHGHG
Sequences:
>Translated_237_residues MRTLDKRIAPPVRLAASLVARAPTLTLAYDARCRSRFAATLDSGEELGVVLPRGTVLADGDVLVADDGGLVRIVAAAEAV LLVRAPDALTLTRAAYHLGNRHTPVEIGTHTLKLEYDPVLADMLTRLGARVERVEAPFQPEAGAYGGGHRHGHDATFAED YALAQQVYGEHHGHAHSHGGHGHPHAHDHPHSHDGHACGHDHPRDHAHDPAAGQDPAGAGGHRHGPACTHRHGHGHG >Mature_237_residues MRTLDKRIAPPVRLAASLVARAPTLTLAYDARCRSRFAATLDSGEELGVVLPRGTVLADGDVLVADDGGLVRIVAAAEAV LLVRAPDALTLTRAAYHLGNRHTPVEIGTHTLKLEYDPVLADMLTRLGARVERVEAPFQPEAGAYGGGHRHGHDATFAED YALAQQVYGEHHGHAHSHGGHGHPHAHDHPHSHDGHACGHDHPRDHAHDPAAGQDPAGAGGHRHGPACTHRHGHGHG
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly [H]
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 [H]
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N [H]
EC number: NA
Molecular weight: Translated: 25107; Mature: 25107
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLDKRIAPPVRLAASLVARAPTLTLAYDARCRSRFAATLDSGEELGVVLPRGTVLADG CCCCHHHCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCCCCEEEEECCCEEEECC DVLVADDGGLVRIVAAAEAVLLVRAPDALTLTRAAYHLGNRHTPVEIGTHTLKLEYDPVL CEEEECCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCCCEEECCEEEEEECCHHH ADMLTRLGARVERVEAPFQPEAGAYGGGHRHGHDATFAEDYALAQQVYGEHHGHAHSHGG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC HGHPHAHDHPHSHDGHACGHDHPRDHAHDPAAGQDPAGAGGHRHGPACTHRHGHGHG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTLDKRIAPPVRLAASLVARAPTLTLAYDARCRSRFAATLDSGEELGVVLPRGTVLADG CCCCHHHCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCCCCEEEEECCCEEEECC DVLVADDGGLVRIVAAAEAVLLVRAPDALTLTRAAYHLGNRHTPVEIGTHTLKLEYDPVL CEEEECCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCCCEEECCEEEEEECCHHH ADMLTRLGARVERVEAPFQPEAGAYGGGHRHGHDATFAEDYALAQQVYGEHHGHAHSHGG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC HGHPHAHDHPHSHDGHACGHDHPRDHAHDPAAGQDPAGAGGHRHGPACTHRHGHGHG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA