| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ureC [H]
Identifier: 238026420
GI number: 238026420
Start: 819092
End: 820798
Strand: Reverse
Name: ureC [H]
Synonym: bglu_1g07550
Alternate gene names: 238026420
Gene position: 820798-819092 (Counterclockwise)
Preceding gene: 238026421
Following gene: 238026419
Centisome position: 21.01
GC content: 68.78
Gene sequence:
>1707_bases ATGACACTACGCTTGAGCCGCCGCGCCTACGCGGAAATGTTCGGCCCGACCACGGGCGACCGCATCCGTCTCGCCGACAC CGAACTGCTGATCGAGGTCGAGCGCGACTGCACGATCTACGGCGAGGAAGTGAAATTCGGCGGCGGCAAGGTGATCCGCG ACGGCATGGGCCAGTCGCAGCGCGTGGCCGCCGAGGTGGCCGACACCGTCATCACCAACGCGGTGATCCTCGACCACTGG GGCATCGTGAAGGCCGACATCGCCATCAAGGACGGCCGCATCGCCGCGATCGGCAAGGCCGGCAATCCCGACATACAGCC CGGCGTGACGATCGCGATCGGCGCGGCCACCGAGGTGATCGCCGGCGAAGGCATGATCGTCACGGCCGGCGGCATCGACA CGCACATCCATTTCATCAGCCCGCAGCAGATCGACGAGGCGCTCGCCTCGGGCGTGACCACCATGATCGGCGGCGGCACC GGCCCCGCCGCCGGCACCAATGCCACCACCTGCACGCCGGGGCCGTGGCACCTCGAACGGATGCTGCAGGCCGCCGACGG CTGGCCGATCAACATCGGCTTTCTCGGCAAGGGCAACGTGAGCCTGCCGAAGCCGGCCGAGGAGCAGATCGCCGCCGGCG CGATCGGCCTCAAGCTGCACGAGGACTGGGGCTCGACGCCGGCCGCGATCGACAACTGCCTCACCGTGGCGGACGCCACC GACACGCAGGTGGCGATCCATACCGACACGCTCAACGAGGGCGGCTTCGTCGAGTCGACGGTGGCCGCGTTCAAGGGCCG CACGATCCACACCTATCACACCGAGGGCGCGGGCGGCGGCCACGCGCCCGACATCCTGAAGGTCTGCTCGGAACTGAACG TGCTGCCCTCGTCGACCAACCCGACGCGGCCGTATACGATCAACACGCTCGACGAGCACCTCGACATGCTGATGGTCTGC CATCACCTCGATGCGTCGATCGCCGAGGACCTCGCGTTCGCCGAATCGCGGATCCGCCGCGAGACGATCGCGGCCGAGGA CATCCTGCACGATCTCGGCGCCCTGTCGATGATGTCGTCCGACTCGCAGGCGATGGGCCGCGTGGGCGAGGTGATCATCC GCGCGTGGCAGACCGCGCACAAGATGAAGGTGCAGCGCGGCGCGCTGCCCGAGGACGGCGCGCGCAACGACAACTTCCGC GCCAAGCGCTACGTCGCGAAGTACACCATCAACCCGGCGCTCACGCACGGCATCGCGCACGAGGTCGGCTCGATCGAGCC CGGCAAGTGGGCCGACCTGGTGCTGTGGCAGCCGGCGTTCTTCGGCGTGAAGCCGGCCATGATCCTGAAGGGCGGGATGA TCGCGGTGGCCCAGATGGGCGATCCGAACGCGTCGATCCCGACGCCGCAGCCGGTCCATTTCCGCGACATGTTCGCCACG CGCGGCGGCGCGCTGGGCCGCACCTCGCTGACCTTCGTCTCGCAGCTCGCGGCCGATGCCGGCGTGGCGGCGCGCTACGG GCTTGCCAAGCGCGTCGTGGCGGTCCGCCACTGCCGCAGCGTGACCAAGGCCGACATGATCCACAACGCGTGGCGGCCGA GCATCAGCGTCGATCCCGAGACCTACGACGTGGTGGCCAACGGCCAGCTGCTGACCTGCGAGCCCGCCACCGTGCTGCCG ATGGCGCAGCGTTATTTCCTGTTCTGA
Upstream 100 bases:
>100_bases TCTACGGCTTCCAGGGCAAGGTGATGGGCGCGCTCTGAGCGCCCGCCGCCTCCATTCGTTGCGCACAGGGCGCCCGCCGG CGCCCCGGGGATTCCACACC
Downstream 100 bases:
>100_bases CCACTCCATGCGCACGCTCGACAAACGCATCGCCCCCCCCGTCAGGCTCGCCGCGTCGCTGGTGGCGCGCGCGCCCACCC TCACGCTCGCCTACGACGCA
Product: urease subunit alpha
Products: NA
Alternate protein names: Urea amidohydrolase subunit alpha [H]
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MTLRLSRRAYAEMFGPTTGDRIRLADTELLIEVERDCTIYGEEVKFGGGKVIRDGMGQSQRVAAEVADTVITNAVILDHW GIVKADIAIKDGRIAAIGKAGNPDIQPGVTIAIGAATEVIAGEGMIVTAGGIDTHIHFISPQQIDEALASGVTTMIGGGT GPAAGTNATTCTPGPWHLERMLQAADGWPINIGFLGKGNVSLPKPAEEQIAAGAIGLKLHEDWGSTPAAIDNCLTVADAT DTQVAIHTDTLNEGGFVESTVAAFKGRTIHTYHTEGAGGGHAPDILKVCSELNVLPSSTNPTRPYTINTLDEHLDMLMVC HHLDASIAEDLAFAESRIRRETIAAEDILHDLGALSMMSSDSQAMGRVGEVIIRAWQTAHKMKVQRGALPEDGARNDNFR AKRYVAKYTINPALTHGIAHEVGSIEPGKWADLVLWQPAFFGVKPAMILKGGMIAVAQMGDPNASIPTPQPVHFRDMFAT RGGALGRTSLTFVSQLAADAGVAARYGLAKRVVAVRHCRSVTKADMIHNAWRPSISVDPETYDVVANGQLLTCEPATVLP MAQRYFLF
Sequences:
>Translated_568_residues MTLRLSRRAYAEMFGPTTGDRIRLADTELLIEVERDCTIYGEEVKFGGGKVIRDGMGQSQRVAAEVADTVITNAVILDHW GIVKADIAIKDGRIAAIGKAGNPDIQPGVTIAIGAATEVIAGEGMIVTAGGIDTHIHFISPQQIDEALASGVTTMIGGGT GPAAGTNATTCTPGPWHLERMLQAADGWPINIGFLGKGNVSLPKPAEEQIAAGAIGLKLHEDWGSTPAAIDNCLTVADAT DTQVAIHTDTLNEGGFVESTVAAFKGRTIHTYHTEGAGGGHAPDILKVCSELNVLPSSTNPTRPYTINTLDEHLDMLMVC HHLDASIAEDLAFAESRIRRETIAAEDILHDLGALSMMSSDSQAMGRVGEVIIRAWQTAHKMKVQRGALPEDGARNDNFR AKRYVAKYTINPALTHGIAHEVGSIEPGKWADLVLWQPAFFGVKPAMILKGGMIAVAQMGDPNASIPTPQPVHFRDMFAT RGGALGRTSLTFVSQLAADAGVAARYGLAKRVVAVRHCRSVTKADMIHNAWRPSISVDPETYDVVANGQLLTCEPATVLP MAQRYFLF >Mature_567_residues TLRLSRRAYAEMFGPTTGDRIRLADTELLIEVERDCTIYGEEVKFGGGKVIRDGMGQSQRVAAEVADTVITNAVILDHWG IVKADIAIKDGRIAAIGKAGNPDIQPGVTIAIGAATEVIAGEGMIVTAGGIDTHIHFISPQQIDEALASGVTTMIGGGTG PAAGTNATTCTPGPWHLERMLQAADGWPINIGFLGKGNVSLPKPAEEQIAAGAIGLKLHEDWGSTPAAIDNCLTVADATD TQVAIHTDTLNEGGFVESTVAAFKGRTIHTYHTEGAGGGHAPDILKVCSELNVLPSSTNPTRPYTINTLDEHLDMLMVCH HLDASIAEDLAFAESRIRRETIAAEDILHDLGALSMMSSDSQAMGRVGEVIIRAWQTAHKMKVQRGALPEDGARNDNFRA KRYVAKYTINPALTHGIAHEVGSIEPGKWADLVLWQPAFFGVKPAMILKGGMIAVAQMGDPNASIPTPQPVHFRDMFATR GGALGRTSLTFVSQLAADAGVAARYGLAKRVVAVRHCRSVTKADMIHNAWRPSISVDPETYDVVANGQLLTCEPATVLPM AQRYFLF
Specific function: Unknown
COG id: COG0804
COG function: function code E; Urea amidohydrolase (urease) alpha subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 urease domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 - InterPro: IPR011612 - InterPro: IPR005848 - InterPro: IPR017951 - InterPro: IPR017950 [H]
Pfam domain/function: PF01979 Amidohydro_1; PF00449 Urease_alpha [H]
EC number: =3.5.1.5 [H]
Molecular weight: Translated: 60526; Mature: 60395
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS01120 UREASE_1 ; PS00145 UREASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRLSRRAYAEMFGPTTGDRIRLADTELLIEVERDCTIYGEEVKFGGGKVIRDGMGQSQ CEEEECHHHHHHHHCCCCCCEEEEECCEEEEEEECCCEEEECEEEECCCEEEECCCCCHH RVAAEVADTVITNAVILDHWGIVKADIAIKDGRIAAIGKAGNPDIQPGVTIAIGAATEVI HHHHHHHHHHHHHEEEEECCCEEEEEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCEE AGEGMIVTAGGIDTHIHFISPQQIDEALASGVTTMIGGGTGPAAGTNATTCTPGPWHLER ECCCEEEEECCCEEEEEEECHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHH MLQAADGWPINIGFLGKGNVSLPKPAEEQIAAGAIGLKLHEDWGSTPAAIDNCLTVADAT HHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCEEEEEEECCCCCCHHHHHHHEEEECCC DTQVAIHTDTLNEGGFVESTVAAFKGRTIHTYHTEGAGGGHAPDILKVCSELNVLPSSTN CCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCC PTRPYTINTLDEHLDMLMVCHHLDASIAEDLAFAESRIRRETIAAEDILHDLGALSMMSS CCCCEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DSQAMGRVGEVIIRAWQTAHKMKVQRGALPEDGARNDNFRAKRYVAKYTINPALTHGIAH CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEEECCHHHHHHHHH EVGSIEPGKWADLVLWQPAFFGVKPAMILKGGMIAVAQMGDPNASIPTPQPVHFRDMFAT HHCCCCCCCCEEEEEECCHHHCCCHHHEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHH RGGALGRTSLTFVSQLAADAGVAARYGLAKRVVAVRHCRSVTKADMIHNAWRPSISVDPE CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TYDVVANGQLLTCEPATVLPMAQRYFLF CEEEEECCEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure TLRLSRRAYAEMFGPTTGDRIRLADTELLIEVERDCTIYGEEVKFGGGKVIRDGMGQSQ EEEECHHHHHHHHCCCCCCEEEEECCEEEEEEECCCEEEECEEEECCCEEEECCCCCHH RVAAEVADTVITNAVILDHWGIVKADIAIKDGRIAAIGKAGNPDIQPGVTIAIGAATEVI HHHHHHHHHHHHHEEEEECCCEEEEEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCEE AGEGMIVTAGGIDTHIHFISPQQIDEALASGVTTMIGGGTGPAAGTNATTCTPGPWHLER ECCCEEEEECCCEEEEEEECHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHH MLQAADGWPINIGFLGKGNVSLPKPAEEQIAAGAIGLKLHEDWGSTPAAIDNCLTVADAT HHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCEEEEEEECCCCCCHHHHHHHEEEECCC DTQVAIHTDTLNEGGFVESTVAAFKGRTIHTYHTEGAGGGHAPDILKVCSELNVLPSSTN CCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCC PTRPYTINTLDEHLDMLMVCHHLDASIAEDLAFAESRIRRETIAAEDILHDLGALSMMSS CCCCEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DSQAMGRVGEVIIRAWQTAHKMKVQRGALPEDGARNDNFRAKRYVAKYTINPALTHGIAH CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEEECCHHHHHHHHH EVGSIEPGKWADLVLWQPAFFGVKPAMILKGGMIAVAQMGDPNASIPTPQPVHFRDMFAT HHCCCCCCCCEEEEEECCHHHCCCHHHEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHH RGGALGRTSLTFVSQLAADAGVAARYGLAKRVVAVRHCRSVTKADMIHNAWRPSISVDPE CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TYDVVANGQLLTCEPATVLPMAQRYFLF CEEEEECCEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA