| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026371
Identifier: 238026371
GI number: 238026371
Start: 761136
End: 761774
Strand: Reverse
Name: 238026371
Synonym: bglu_1g07050
Alternate gene names: NA
Gene position: 761774-761136 (Counterclockwise)
Preceding gene: 238026372
Following gene: 238026370
Centisome position: 19.5
GC content: 68.54
Gene sequence:
>639_bases ATGACCGTGGGCCACGATGCCAGCCAACCCCGCTGGTATTACGATTTCCTGTCACCGTTCACGTATCTGCTGCTGGAGCA GCAGGACAAGTGGCCGAGCATGCCGTTCGCGCCGGTCCCGGTGTCGCTGCCGGTCCTGCAGGCGCACTGGGGGCAGCGTC CGATGTACGACGTGCCGGCCAAGCGCGTGTTCACCTATCGCCATGCGCTGTTCCGCGCCGAGCAGCTCGGCATCGCGTTG CGCATGCCGCCCGCGCATCCGTTCGATTCGACGCGCCTGCTGCGCCTCGCGATCGTGGTGGACGCCGATCTCGCCGTGGT GCGCGAGATGTTCCGCTTCATCTGGCGCGAGGGGCGCGATCCGCTCGCCGAGGAAGGCTTCGCCGCGCTCTGCGAGCGGG TGGGCGTGGCCGCCGACGACCCGCGCATCGACGCGCCGCAGACCCACGCGCAACTGCAGCGCAACACGCAGGACGCGATC GAGCTCGGCGTGTTCGGCGTGCCGACCTTCTGGATGAACCGCCAGCTGTTCTGGGGCGAGGACGCGCTGCCGATGGTGCT CTATTGCGCGCGCACGCCGAACTGGCTCGAATCGAAGGAAGTGAAGCGGATCAGCACGCTGCCGCCGGGCCACCGCTGA
Upstream 100 bases:
>100_bases GCGGCCAGGGCGCCGCGATTGCTGCAATCGCCGTCGCCATTGCGTACCATGGCGACACGCGGGCCGCGCGGCCCCCCGCC TTTCCTCAGGAGACTTGCCG
Downstream 100 bases:
>100_bases TCGCGGCAAGCCGCGCCGATACCGCGGATAACCGGCCGGCCCGCGCCCCGGCCGCGCGCCCCGATATCCTTGGCGCGACG CCCTCGACGCCCCGCCGATG
Product: thioredoxin domain-containing protein
Products: NA
Alternate protein names: Dsba Oxidoreductase; Isomerase; 2-Hydroxychromene-2-Carboxylate Isomerase; Thioredoxin Domain Protein; DSBA-Like Thioredoxin Domain Protein; Thioredoxin Oxidoreductase
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTVGHDASQPRWYYDFLSPFTYLLLEQQDKWPSMPFAPVPVSLPVLQAHWGQRPMYDVPAKRVFTYRHALFRAEQLGIAL RMPPAHPFDSTRLLRLAIVVDADLAVVREMFRFIWREGRDPLAEEGFAALCERVGVAADDPRIDAPQTHAQLQRNTQDAI ELGVFGVPTFWMNRQLFWGEDALPMVLYCARTPNWLESKEVKRISTLPPGHR
Sequences:
>Translated_212_residues MTVGHDASQPRWYYDFLSPFTYLLLEQQDKWPSMPFAPVPVSLPVLQAHWGQRPMYDVPAKRVFTYRHALFRAEQLGIAL RMPPAHPFDSTRLLRLAIVVDADLAVVREMFRFIWREGRDPLAEEGFAALCERVGVAADDPRIDAPQTHAQLQRNTQDAI ELGVFGVPTFWMNRQLFWGEDALPMVLYCARTPNWLESKEVKRISTLPPGHR >Mature_211_residues TVGHDASQPRWYYDFLSPFTYLLLEQQDKWPSMPFAPVPVSLPVLQAHWGQRPMYDVPAKRVFTYRHALFRAEQLGIALR MPPAHPFDSTRLLRLAIVVDADLAVVREMFRFIWREGRDPLAEEGFAALCERVGVAADDPRIDAPQTHAQLQRNTQDAIE LGVFGVPTFWMNRQLFWGEDALPMVLYCARTPNWLESKEVKRISTLPPGHR
Specific function: Unknown
COG id: COG3917
COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24442; Mature: 24311
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVGHDASQPRWYYDFLSPFTYLLLEQQDKWPSMPFAPVPVSLPVLQAHWGQRPMYDVPA CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCH KRVFTYRHALFRAEQLGIALRMPPAHPFDSTRLLRLAIVVDADLAVVREMFRFIWREGRD HHHHHHHHHHHHHHHHCEEEECCCCCCCCCHHEEEEEEEECCHHHHHHHHHHHHHHCCCC PLAEEGFAALCERVGVAADDPRIDAPQTHAQLQRNTQDAIELGVFGVPTFWMNRQLFWGE CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHHCCCCCCHHHHCCEEEECC DALPMVLYCARTPNWLESKEVKRISTLPPGHR CCCCEEEEECCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TVGHDASQPRWYYDFLSPFTYLLLEQQDKWPSMPFAPVPVSLPVLQAHWGQRPMYDVPA CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCH KRVFTYRHALFRAEQLGIALRMPPAHPFDSTRLLRLAIVVDADLAVVREMFRFIWREGRD HHHHHHHHHHHHHHHHCEEEECCCCCCCCCHHEEEEEEEECCHHHHHHHHHHHHHHCCCC PLAEEGFAALCERVGVAADDPRIDAPQTHAQLQRNTQDAIELGVFGVPTFWMNRQLFWGE CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHHCCCCCCHHHHCCEEEECC DALPMVLYCARTPNWLESKEVKRISTLPPGHR CCCCEEEEECCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA