Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026372

Identifier: 238026372

GI number: 238026372

Start: 761948

End: 763345

Strand: Reverse

Name: 238026372

Synonym: bglu_1g07060

Alternate gene names: NA

Gene position: 763345-761948 (Counterclockwise)

Preceding gene: 238026374

Following gene: 238026371

Centisome position: 19.54

GC content: 72.25

Gene sequence:

>1398_bases
ATGACTGCCCGCCCGCCTCGCTCCCGCCGTCCGCACCGGTTCCTGGCCCGCTTCGTCGCGGTGTCGTGGCGCGACCTGGC
GATGTCGTTCGGCCCGGCGCTGCTGCTCGGCGCCGCGGCGATCTGGCTCGCGATCCGGCTGATCCAGCCGGCACCGCCCA
CCCATCTGGTGCTCTCGGCCGGCCCGCCCGGCAGCACCAACTGGATGGCCGCGCGCCGGTATCAGCGAATCCTCGCGAAG
AACGGCGTGACGCTCGAGGTGCTGCCCTCGGAAGGCTCGGCGCAGAACCTGCAGCGCCTGCTCGATCCGCACGGGCGCGT
CGACGTGGCGTTCGTGCAGAGCGGCGTCGATCAGAAGGACCGGCCCGACAGCCTGGTCTCGCTCGGCAGCGTCGGCTACC
TGCCGCTCGCGATCCTCTACCGCGGCCCGCCCGTCGCGCGGCTCTCGCAGTTCGACGGCAAGCGGCTCGCGCTCGGCCCG
GACGGCAGCGGCGCCCACGAGCTCGGCCTCGCGCTGCTGAAGCTCAACGGCATCGTGCCGGGCGGCGCGACGCGGCTGTT
GCCGCTCGCGGGCGAGGACGCCGCGCGCGCGCTGATCGACGGCCGCATCGACGCGGCGTTCCTGTCGGGCGATTCGACCC
AGATCCCGGTGATGGCCAAGCTGTTTCGCGCGCCGGGGGTGCGTTTCTATTCGTTCCCGCAGGCCGAGGCCTACACGCGG
CGCTTCCCGTACCTGACCGACATCACGCTGCCGATGGGCGTGTACGACCCCGGCACCAACCTGCCGCCGGAGGATATCCA
CACGCTGTCGCCCACCGTCGAGCTGATCGCGCGCGCCTCGCTGCATCCGGCGCTGTCGGACCTGCTGATCGAGGCCGCGC
GCGAGGTGCACGGGCGCGCGACGATCCTGCAGCGCGCCGGCGAATTCCCGTCGCCCGTCACGCACGGCAGCTTCCCGCTG
TCCGACGACGCGGCGCGCTACTACAAGTCCGGCAAGACCTTCCTCTACCGGCAGCTGCCGTTCTGGGTGGCGAGCCTCGT
CGACCGGCTGCTGGTGATCGTGGTGCCGCTGGTGGTGGTATTGATCCCGGGGCTGCGCTTCGTGCCGATGCTGTACGGCT
GGCGGGTCCGCTCACGGATCTACCGCTGGTACGGCGCGCTCATCACGCTGGAGCGCAGCGCGCTCGGCGAGCCGAGCGGG
CGCGAACGGCTCGCGCTGCTCGAACGGCTCGACGACGTGGAGGATTCGGTCAACCGCATGAAGATGCCGCTCGCCTACGC
CGGACAGTTCTACGTGCTGCGCGAGCACATCGGCTTCGTGCGCGAACGCCTGCTCGCGCAGGACGCGGCACCGCGCGATG
CCGCGCCGGCCGGCGGCGCCGCCGCCGCGCCGGGTTGA

Upstream 100 bases:

>100_bases
ATCGCGCGTTCCGCCCGCCGCAGGGCCGCCGAACTAGGGTACCATCCTCGCCGTCGCCACGGCCCGCGCGCCGCCCTCCC
GCCCTTCGTATCGCACCGCG

Downstream 100 bases:

>100_bases
GCCGGGCGGGCGAGGCTGAATCGGCTCGCCGCCGGCGCGCCGGAGGGCGCCCGCGCCGCGCCGTGATGCCCGAGCGGCCA
GGGCGCCGCGATTGCTGCAA

Product: 2-hydroxychromene-2-carboxylate isomerase

Products: NA

Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TRAP-Type Transport System Periplasmic Component Protein; TRAP-Type Transport System Periplasmic Protein; Trap Transporter Solute Receptor Taxi Family Protein; TAXI Family TRAP Transporter Solute Receptor; Signal Peptide; TRAP-Type Transport System Periplasmic Component-Like; Trap Transporter Solute Receptor Taxi Family

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MTARPPRSRRPHRFLARFVAVSWRDLAMSFGPALLLGAAAIWLAIRLIQPAPPTHLVLSAGPPGSTNWMAARRYQRILAK
NGVTLEVLPSEGSAQNLQRLLDPHGRVDVAFVQSGVDQKDRPDSLVSLGSVGYLPLAILYRGPPVARLSQFDGKRLALGP
DGSGAHELGLALLKLNGIVPGGATRLLPLAGEDAARALIDGRIDAAFLSGDSTQIPVMAKLFRAPGVRFYSFPQAEAYTR
RFPYLTDITLPMGVYDPGTNLPPEDIHTLSPTVELIARASLHPALSDLLIEAAREVHGRATILQRAGEFPSPVTHGSFPL
SDDAARYYKSGKTFLYRQLPFWVASLVDRLLVIVVPLVVVLIPGLRFVPMLYGWRVRSRIYRWYGALITLERSALGEPSG
RERLALLERLDDVEDSVNRMKMPLAYAGQFYVLREHIGFVRERLLAQDAAPRDAAPAGGAAAAPG

Sequences:

>Translated_465_residues
MTARPPRSRRPHRFLARFVAVSWRDLAMSFGPALLLGAAAIWLAIRLIQPAPPTHLVLSAGPPGSTNWMAARRYQRILAK
NGVTLEVLPSEGSAQNLQRLLDPHGRVDVAFVQSGVDQKDRPDSLVSLGSVGYLPLAILYRGPPVARLSQFDGKRLALGP
DGSGAHELGLALLKLNGIVPGGATRLLPLAGEDAARALIDGRIDAAFLSGDSTQIPVMAKLFRAPGVRFYSFPQAEAYTR
RFPYLTDITLPMGVYDPGTNLPPEDIHTLSPTVELIARASLHPALSDLLIEAAREVHGRATILQRAGEFPSPVTHGSFPL
SDDAARYYKSGKTFLYRQLPFWVASLVDRLLVIVVPLVVVLIPGLRFVPMLYGWRVRSRIYRWYGALITLERSALGEPSG
RERLALLERLDDVEDSVNRMKMPLAYAGQFYVLREHIGFVRERLLAQDAAPRDAAPAGGAAAAPG
>Mature_464_residues
TARPPRSRRPHRFLARFVAVSWRDLAMSFGPALLLGAAAIWLAIRLIQPAPPTHLVLSAGPPGSTNWMAARRYQRILAKN
GVTLEVLPSEGSAQNLQRLLDPHGRVDVAFVQSGVDQKDRPDSLVSLGSVGYLPLAILYRGPPVARLSQFDGKRLALGPD
GSGAHELGLALLKLNGIVPGGATRLLPLAGEDAARALIDGRIDAAFLSGDSTQIPVMAKLFRAPGVRFYSFPQAEAYTRR
FPYLTDITLPMGVYDPGTNLPPEDIHTLSPTVELIARASLHPALSDLLIEAAREVHGRATILQRAGEFPSPVTHGSFPLS
DDAARYYKSGKTFLYRQLPFWVASLVDRLLVIVVPLVVVLIPGLRFVPMLYGWRVRSRIYRWYGALITLERSALGEPSGR
ERLALLERLDDVEDSVNRMKMPLAYAGQFYVLREHIGFVRERLLAQDAAPRDAAPAGGAAAAPG

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50724; Mature: 50593

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARPPRSRRPHRFLARFVAVSWRDLAMSFGPALLLGAAAIWLAIRLIQPAPPTHLVLSA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
GPPGSTNWMAARRYQRILAKNGVTLEVLPSEGSAQNLQRLLDPHGRVDVAFVQSGVDQKD
CCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEHHCCCCCCC
RPDSLVSLGSVGYLPLAILYRGPPVARLSQFDGKRLALGPDGSGAHELGLALLKLNGIVP
CCHHHHHHCCCCHHHHHEEECCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCC
GGATRLLPLAGEDAARALIDGRIDAAFLSGDSTQIPVMAKLFRAPGVRFYSFPQAEAYTR
CCCCEEEEECCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEECCCHHHHHH
RFPYLTDITLPMGVYDPGTNLPPEDIHTLSPTVELIARASLHPALSDLLIEAAREVHGRA
CCCCEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TILQRAGEFPSPVTHGSFPLSDDAARYYKSGKTFLYRQLPFWVASLVDRLLVIVVPLVVV
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
LIPGLRFVPMLYGWRVRSRIYRWYGALITLERSALGEPSGRERLALLERLDDVEDSVNRM
HHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KMPLAYAGQFYVLREHIGFVRERLLAQDAAPRDAAPAGGAAAAPG
HCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TARPPRSRRPHRFLARFVAVSWRDLAMSFGPALLLGAAAIWLAIRLIQPAPPTHLVLSA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
GPPGSTNWMAARRYQRILAKNGVTLEVLPSEGSAQNLQRLLDPHGRVDVAFVQSGVDQKD
CCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEHHCCCCCCC
RPDSLVSLGSVGYLPLAILYRGPPVARLSQFDGKRLALGPDGSGAHELGLALLKLNGIVP
CCHHHHHHCCCCHHHHHEEECCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCC
GGATRLLPLAGEDAARALIDGRIDAAFLSGDSTQIPVMAKLFRAPGVRFYSFPQAEAYTR
CCCCEEEEECCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEECCCHHHHHH
RFPYLTDITLPMGVYDPGTNLPPEDIHTLSPTVELIARASLHPALSDLLIEAAREVHGRA
CCCCEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TILQRAGEFPSPVTHGSFPLSDDAARYYKSGKTFLYRQLPFWVASLVDRLLVIVVPLVVV
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
LIPGLRFVPMLYGWRVRSRIYRWYGALITLERSALGEPSGRERLALLERLDDVEDSVNRM
HHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KMPLAYAGQFYVLREHIGFVRERLLAQDAAPRDAAPAGGAAAAPG
HCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA