| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pcaK [H]
Identifier: 238026358
GI number: 238026358
Start: 744172
End: 745527
Strand: Direct
Name: pcaK [H]
Synonym: bglu_1g06920
Alternate gene names: 238026358
Gene position: 744172-745527 (Clockwise)
Preceding gene: 238026356
Following gene: 238026363
Centisome position: 19.05
GC content: 72.79
Gene sequence:
>1356_bases ATGAGCGCGCCGCAGGCGGGGCCGCGCACGCTCGAGATCGAGCGCGTGATCGACGAGACGCACCGGCCGGGCTTCCAGGC CGCGCTGTTCGCGTTGTGCGGCGCATGCCTCGTGATCGACGGCTTCGACGCGCAGGCGATGGGCTACGTCGCGCCGAGCG TGATCGCCGAGTGGGGCGTCGCGAAGGCCGCGCTCGGACCGGTGTTCAGCGCGAGCCTGTTCGGCATGCTGATCGGCGCG CTGGGGCTGTCGGTGCTGGCCGACCGGATCGGCCGCCGCCCGGTGCTAATCGGCGCGACGCTGTTCTTCGCGCTGGCGAT GCTCGCCACGCCGCTGGCCGCCTCGATCACGTCATTGATCGCGCTGCGCTTCGTGACCGGGCTTGGCCTTGGCTGCATCA TGCCGAACGCGATGGCGCTGGTCGGCGAGTTCAGCCCGGCCGTGCATCGCGTCAAGCGCATGATGTTCGTGTCGTGCGGC TTCACGCTGGGCGCCGCGCTCGGCGGGTTCGTCAGCGCCGCGCTGATCCCGGCCCTCGGCTGGCGCGCGGTGTTCGTGGC GGGCGGGGCGGTGCCGCTCGCGCTGGCGCTGGCGATGCTTGCCTGGCTGCCGGAATCGCTGCAGTTCCTGGTGCTGAAGG CACGCATGGCGCGCGCCCGCGCCTGGCTCGCGGCGTTCGCGCCGGCGCTTGAGATCGACGCGCGGACGCGGCTCGTGGTG CGCGAGCCGGCCGCTGGCGCCGCGCCCGTCGCCGAGCTGTTCCGCGCGGGCCGGCTGCCCGTCACGCTGCTGCTCTGGGC GATCAGCTTTCTGAACCTGATCGATTTGTATTTCCTGTCGAACTGGCTGCCCACCGTGATGCGCGACGCCGGCCATTCGT CGCAGGCGGCCGTGATCGTCGGCACCGCGCTGCAGACGGGCGGCGTGGCCGGCACGCTGCTGCTGGGCGGGTTCATCGAG CGCCATGGTTTCGTGCGCGTGCTGTCCGCCTGCTTCGTCTGCGCCGCCTTGTCGGTGGCGGCGATCGGCGCGGTGGCGGG CTCGCTGCCGTGGCTGCTGGTGGCGGTGTTCGCCGGCGGCTTCTGCGTGGTGGGCGGGCAGCCGGCTGTCAACGCGCTGG CCGGCCACTATTATCCGACCGCGCTGCGCTCGACCGGAATCGGCTGGAGCCTTGGGGTGGGCCGCATCGGCTCGGTGCTC GGGCCGCTCGTGGGCGGCCAGCTGATCGCGCTCGGCTGGTCGAACGGCGCGCTGTTTCTCGCCGCCGCGCTGCCGGTGCT GGCCTCGGCATTGTTCGTGCTGAGCCTCGGCCTGGCCACGCGGCCGGCCGATGGCCAGGCGCGGCGCACGGTGTGA
Upstream 100 bases:
>100_bases TGCGCCAGCCGACGCCTCGCGACGCCGTGGCCGGCCGCCGTGACGGCCCGCCTCGATGCCGGCGCCGCCGCGCCCGCCCC GTGCCCGCCGGGAGCGCGCG
Downstream 100 bases:
>100_bases GATGCGAATCGGGCTCGAACGGCGACGCGGCCGGTGATTGGCGCCCGCTTCAGACCTCGCGTGCGGCCGCCGCCGGCAGG CGCCGGCGTTCCCACCACGC
Product: major facilitator superfamily protein
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSAPQAGPRTLEIERVIDETHRPGFQAALFALCGACLVIDGFDAQAMGYVAPSVIAEWGVAKAALGPVFSASLFGMLIGA LGLSVLADRIGRRPVLIGATLFFALAMLATPLAASITSLIALRFVTGLGLGCIMPNAMALVGEFSPAVHRVKRMMFVSCG FTLGAALGGFVSAALIPALGWRAVFVAGGAVPLALALAMLAWLPESLQFLVLKARMARARAWLAAFAPALEIDARTRLVV REPAAGAAPVAELFRAGRLPVTLLLWAISFLNLIDLYFLSNWLPTVMRDAGHSSQAAVIVGTALQTGGVAGTLLLGGFIE RHGFVRVLSACFVCAALSVAAIGAVAGSLPWLLVAVFAGGFCVVGGQPAVNALAGHYYPTALRSTGIGWSLGVGRIGSVL GPLVGGQLIALGWSNGALFLAAALPVLASALFVLSLGLATRPADGQARRTV
Sequences:
>Translated_451_residues MSAPQAGPRTLEIERVIDETHRPGFQAALFALCGACLVIDGFDAQAMGYVAPSVIAEWGVAKAALGPVFSASLFGMLIGA LGLSVLADRIGRRPVLIGATLFFALAMLATPLAASITSLIALRFVTGLGLGCIMPNAMALVGEFSPAVHRVKRMMFVSCG FTLGAALGGFVSAALIPALGWRAVFVAGGAVPLALALAMLAWLPESLQFLVLKARMARARAWLAAFAPALEIDARTRLVV REPAAGAAPVAELFRAGRLPVTLLLWAISFLNLIDLYFLSNWLPTVMRDAGHSSQAAVIVGTALQTGGVAGTLLLGGFIE RHGFVRVLSACFVCAALSVAAIGAVAGSLPWLLVAVFAGGFCVVGGQPAVNALAGHYYPTALRSTGIGWSLGVGRIGSVL GPLVGGQLIALGWSNGALFLAAALPVLASALFVLSLGLATRPADGQARRTV >Mature_450_residues SAPQAGPRTLEIERVIDETHRPGFQAALFALCGACLVIDGFDAQAMGYVAPSVIAEWGVAKAALGPVFSASLFGMLIGAL GLSVLADRIGRRPVLIGATLFFALAMLATPLAASITSLIALRFVTGLGLGCIMPNAMALVGEFSPAVHRVKRMMFVSCGF TLGAALGGFVSAALIPALGWRAVFVAGGAVPLALALAMLAWLPESLQFLVLKARMARARAWLAAFAPALEIDARTRLVVR EPAAGAAPVAELFRAGRLPVTLLLWAISFLNLIDLYFLSNWLPTVMRDAGHSSQAAVIVGTALQTGGVAGTLLLGGFIER HGFVRVLSACFVCAALSVAAIGAVAGSLPWLLVAVFAGGFCVVGGQPAVNALAGHYYPTALRSTGIGWSLGVGRIGSVLG PLVGGQLIALGWSNGALFLAAALPVLASALFVLSLGLATRPADGQARRTV
Specific function: Transporter for 4-hydroxybenzoate. Also required for chemotaxis to aromatic acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=422, Percent_Identity=24.6445497630332, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI8923870, Length=375, Percent_Identity=29.0666666666667, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI213021148, Length=493, Percent_Identity=23.1237322515213, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI166064021, Length=405, Percent_Identity=26.9135802469136, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI87081723, Length=408, Percent_Identity=34.5588235294118, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI87082231, Length=397, Percent_Identity=25.9445843828715, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1788068, Length=436, Percent_Identity=23.8532110091743, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1786229, Length=337, Percent_Identity=22.2551928783383, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI87082404, Length=378, Percent_Identity=21.6931216931217, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI87082159, Length=388, Percent_Identity=25.2577319587629, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32564663, Length=417, Percent_Identity=22.5419664268585, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI19922874, Length=413, Percent_Identity=23.4866828087167, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24640198, Length=470, Percent_Identity=22.7659574468085, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24640196, Length=470, Percent_Identity=22.7659574468085, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24640200, Length=470, Percent_Identity=22.7659574468085, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI161077756, Length=483, Percent_Identity=22.5672877846791, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI28573099, Length=229, Percent_Identity=27.9475982532751, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24649618, Length=375, Percent_Identity=23.4666666666667, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573101, Length=229, Percent_Identity=27.9475982532751, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46331; Mature: 46199
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPQAGPRTLEIERVIDETHRPGFQAALFALCGACLVIDGFDAQAMGYVAPSVIAEWGV CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH AKAALGPVFSASLFGMLIGALGLSVLADRIGRRPVLIGATLFFALAMLATPLAASITSLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH ALRFVTGLGLGCIMPNAMALVGEFSPAVHRVKRMMFVSCGFTLGAALGGFVSAALIPALG HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC WRAVFVAGGAVPLALALAMLAWLPESLQFLVLKARMARARAWLAAFAPALEIDARTRLVV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEE REPAAGAAPVAELFRAGRLPVTLLLWAISFLNLIDLYFLSNWLPTVMRDAGHSSQAAVIV ECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE GTALQTGGVAGTLLLGGFIERHGFVRVLSACFVCAALSVAAIGAVAGSLPWLLVAVFAGG ECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FCVVGGQPAVNALAGHYYPTALRSTGIGWSLGVGRIGSVLGPLVGGQLIALGWSNGALFL EEEECCCHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHH AAALPVLASALFVLSLGLATRPADGQARRTV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SAPQAGPRTLEIERVIDETHRPGFQAALFALCGACLVIDGFDAQAMGYVAPSVIAEWGV CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH AKAALGPVFSASLFGMLIGALGLSVLADRIGRRPVLIGATLFFALAMLATPLAASITSLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH ALRFVTGLGLGCIMPNAMALVGEFSPAVHRVKRMMFVSCGFTLGAALGGFVSAALIPALG HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC WRAVFVAGGAVPLALALAMLAWLPESLQFLVLKARMARARAWLAAFAPALEIDARTRLVV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEE REPAAGAAPVAELFRAGRLPVTLLLWAISFLNLIDLYFLSNWLPTVMRDAGHSSQAAVIV ECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE GTALQTGGVAGTLLLGGFIERHGFVRVLSACFVCAALSVAAIGAVAGSLPWLLVAVFAGG ECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FCVVGGQPAVNALAGHYYPTALRSTGIGWSLGVGRIGSVLGPLVGGQLIALGWSNGALFL EEEECCCHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHH AAALPVLASALFVLSLGLATRPADGQARRTV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961399 [H]