Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026363

Identifier: 238026363

GI number: 238026363

Start: 751084

End: 752295

Strand: Direct

Name: 238026363

Synonym: bglu_1g06970

Alternate gene names: NA

Gene position: 751084-752295 (Clockwise)

Preceding gene: 238026358

Following gene: 238026365

Centisome position: 19.23

GC content: 69.39

Gene sequence:

>1212_bases
ATGTCCCATAACGATTATTCGCCGATTCCCTGCCCCGTCGTGGTCCCGCTCGACGCGATCCTGCCCGAGGAGCCGCTCCT
GATGATGGGCGCCGGCCCGGTGCCGATCCCGGCCGCGGTCGCCAAGGCCAACGCGATCGTGATCAACCACCTGGGCGCGA
CCATGGCGAAGATCATCGAACAGGTGAAGGAGATGGCGCGCTACGTGTTCCAGACGCGCACGAAGTGGGTGCTCGGCGTG
GCCGGCCCCGGCTCGGCCGCGATGGAGATGGCGATCTCGAACCTGGCCTGGCGCGGTACGCGCGTGCTGTCGATCCGCAA
CGGCTTCTTCAGTGCCCGGATGGCCGAGATGGCCACGCGCATCGGCGCCGAGGTCGCGCTGCTCGACGTACCCGACCGCG
AGGCGGCGAACCTCGCGGCGGTGGCCGCCGCGATCGAGCGCGAGCGGCCCGAGATCGTGACGATCGTCCACGGCGAGACC
TCGAACACGGTCTGGAACCGGCAGCTGCGGGAGATCGCGGCACTGGCCAAGGCGGCCGGCGCGCTGGTGGTGGTCGACGC
GGTCTGCACGCTGTCGACCATGCCGCTCGAGATGGACGGCTGGGGCATCGACGCGGTGATCACGGGCGGCCAGAAGGGGC
TGTCGTCGATTCCGGGCGTGTCGCTGATCGCCTTCTCCGATGCCGCCTGGGAGCGCATGAAGCAGCGCCCCGAGCCGAAC
GCGCACTGGTGCCTCGACATGGCGCTCGCCGAGCACTTCTGGCACAACGCCGGCTACCACTACACGGCGCCCGTCTCGGG
CGTGCTCGCGCTGCACGAGGCCCTGCGCCTCGTCTGCCAGGAAACGCTCGAAAGCCGCTACGCGCGCCACCAGCGCTGCG
CGCTCGCGCTGCAGGCCGGAATCGCGGCGCTCGGCCTCGAGCTCTATGCGCCCGAGGCGTGCCGGCTCAATTCGGTGGTG
GGCATCCGCGTGCCCGAGGGTCTCACGCCGGGCATGATCTGCGGACACATCTCGAAGCAGTATCAGGTCGAGATCTCGGG
TTCGTTCGGCCTGCCGATCGTGCGGATCGGGCAGATGGGCGAGCAGTGCCGCGAACACAACCTGTTCCGTACGCTGCACG
CGTTCGGCCGCACCATGGTCGACCTGAAGGTGCCGGTCGATCTGTCGGGCGGCGTCTCCGCGCTCGAACAGGCGCTGTCG
AACCGGCTCTGA

Upstream 100 bases:

>100_bases
GACGCCGGCGAGCGGGGCTTGCGTGCGGGGCCGGTTCGCGGAATGATCGACGGTTGCGGTGCGCCGCACCGCATCAACCG
CTTCCGCCGAGCCTTCGCCC

Downstream 100 bases:

>100_bases
GAAACGCGGCCGGCCCGCGCGGGCCGGCACCGGGCTCGGCGGCGGGGCGGGGCAGGCCCGGCCGGCCCGCCGTCCGGTGC
GGCGGCAACGATCCCGGCGT

Product: serine-pyruvate aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSHNDYSPIPCPVVVPLDAILPEEPLLMMGAGPVPIPAAVAKANAIVINHLGATMAKIIEQVKEMARYVFQTRTKWVLGV
AGPGSAAMEMAISNLAWRGTRVLSIRNGFFSARMAEMATRIGAEVALLDVPDREAANLAAVAAAIERERPEIVTIVHGET
SNTVWNRQLREIAALAKAAGALVVVDAVCTLSTMPLEMDGWGIDAVITGGQKGLSSIPGVSLIAFSDAAWERMKQRPEPN
AHWCLDMALAEHFWHNAGYHYTAPVSGVLALHEALRLVCQETLESRYARHQRCALALQAGIAALGLELYAPEACRLNSVV
GIRVPEGLTPGMICGHISKQYQVEISGSFGLPIVRIGQMGEQCREHNLFRTLHAFGRTMVDLKVPVDLSGGVSALEQALS
NRL

Sequences:

>Translated_403_residues
MSHNDYSPIPCPVVVPLDAILPEEPLLMMGAGPVPIPAAVAKANAIVINHLGATMAKIIEQVKEMARYVFQTRTKWVLGV
AGPGSAAMEMAISNLAWRGTRVLSIRNGFFSARMAEMATRIGAEVALLDVPDREAANLAAVAAAIERERPEIVTIVHGET
SNTVWNRQLREIAALAKAAGALVVVDAVCTLSTMPLEMDGWGIDAVITGGQKGLSSIPGVSLIAFSDAAWERMKQRPEPN
AHWCLDMALAEHFWHNAGYHYTAPVSGVLALHEALRLVCQETLESRYARHQRCALALQAGIAALGLELYAPEACRLNSVV
GIRVPEGLTPGMICGHISKQYQVEISGSFGLPIVRIGQMGEQCREHNLFRTLHAFGRTMVDLKVPVDLSGGVSALEQALS
NRL
>Mature_402_residues
SHNDYSPIPCPVVVPLDAILPEEPLLMMGAGPVPIPAAVAKANAIVINHLGATMAKIIEQVKEMARYVFQTRTKWVLGVA
GPGSAAMEMAISNLAWRGTRVLSIRNGFFSARMAEMATRIGAEVALLDVPDREAANLAAVAAAIERERPEIVTIVHGETS
NTVWNRQLREIAALAKAAGALVVVDAVCTLSTMPLEMDGWGIDAVITGGQKGLSSIPGVSLIAFSDAAWERMKQRPEPNA
HWCLDMALAEHFWHNAGYHYTAPVSGVLALHEALRLVCQETLESRYARHQRCALALQAGIAALGLELYAPEACRLNSVVG
IRVPEGLTPGMICGHISKQYQVEISGSFGLPIVRIGQMGEQCREHNLFRTLHAFGRTMVDLKVPVDLSGGVSALEQALSN
RL

Specific function: Unknown

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=377, Percent_Identity=31.5649867374005, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17536281, Length=355, Percent_Identity=30.1408450704225, Blast_Score=164, Evalue=6e-41,
Organism=Saccharomyces cerevisiae, GI6321079, Length=366, Percent_Identity=24.5901639344262, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17530823, Length=363, Percent_Identity=32.2314049586777, Blast_Score=182, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: NA

Molecular weight: Translated: 43385; Mature: 43254

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00595 AA_TRANSFER_CLASS_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHNDYSPIPCPVVVPLDAILPEEPLLMMGAGPVPIPAAVAKANAIVINHLGATMAKIIE
CCCCCCCCCCCCEEECHHHHCCCCCEEEECCCCCCCCHHHHHCCEEEEEHHHHHHHHHHH
QVKEMARYVFQTRTKWVLGVAGPGSAAMEMAISNLAWRGTRVLSIRNGFFSARMAEMATR
HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHH
IGAEVALLDVPDREAANLAAVAAAIERERPEIVTIVHGETSNTVWNRQLREIAALAKAAG
HCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCC
ALVVVDAVCTLSTMPLEMDGWGIDAVITGGQKGLSSIPGVSLIAFSDAAWERMKQRPEPN
CEEEEEHHHHHCCCCEEECCCCEEEEEECCCCCHHCCCCCEEEEECHHHHHHHHHCCCCC
AHWCLDMALAEHFWHNAGYHYTAPVSGVLALHEALRLVCQETLESRYARHQRCALALQAG
HHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAALGLELYAPEACRLNSVVGIRVPEGLTPGMICGHISKQYQVEISGSFGLPIVRIGQMG
HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCEEEEEECCCCCCCHHHHHHHH
EQCREHNLFRTLHAFGRTMVDLKVPVDLSGGVSALEQALSNRL
HHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SHNDYSPIPCPVVVPLDAILPEEPLLMMGAGPVPIPAAVAKANAIVINHLGATMAKIIE
CCCCCCCCCCCEEECHHHHCCCCCEEEECCCCCCCCHHHHHCCEEEEEHHHHHHHHHHH
QVKEMARYVFQTRTKWVLGVAGPGSAAMEMAISNLAWRGTRVLSIRNGFFSARMAEMATR
HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHH
IGAEVALLDVPDREAANLAAVAAAIERERPEIVTIVHGETSNTVWNRQLREIAALAKAAG
HCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCC
ALVVVDAVCTLSTMPLEMDGWGIDAVITGGQKGLSSIPGVSLIAFSDAAWERMKQRPEPN
CEEEEEHHHHHCCCCEEECCCCEEEEEECCCCCHHCCCCCEEEEECHHHHHHHHHCCCCC
AHWCLDMALAEHFWHNAGYHYTAPVSGVLALHEALRLVCQETLESRYARHQRCALALQAG
HHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAALGLELYAPEACRLNSVVGIRVPEGLTPGMICGHISKQYQVEISGSFGLPIVRIGQMG
HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCEEEEEECCCCCCCHHHHHHHH
EQCREHNLFRTLHAFGRTMVDLKVPVDLSGGVSALEQALSNRL
HHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]