Click here to switch to the map view.

The map label for this gene is tolB [H]

Identifier: 238026337

GI number: 238026337

Start: 727863

End: 729155

Strand: Reverse

Name: tolB [H]

Synonym: bglu_1g06710

Alternate gene names: 238026337

Gene position: 729155-727863 (Counterclockwise)

Preceding gene: 238026338

Following gene: 238026336

Centisome position: 18.67

GC content: 65.04

Gene sequence:

>1293_bases
ATGACGAAGCTGGGTTTCAGGTCACTCGTGGCCTCGTGTCTGATTGCGGCGGGCAGCGCCGCGAACGCGCAGGTCAACGT
GCTCATCACGGGCGTCGGATCAACGCAGTTTCCGATCGCGACCGCGAATTTCGTCAACGAGGCGGGCCTGCCGCAATCGG
TGACCGCGGTGGTGCGCGCCGATCTCGCTCGCACCGGCAAGTTCTCGAACATCGACGCGGGCAGCACGCCGATTTCCGAA
TCGGCGCCGGTCGACTACAGCGCCTGGAAGGCCAAGGGCGCCAACGCCCTGGTGGCGGGCACCGTGAACCGCGAGGCGAA
CGGCCAGGTGAAGGTCGACTTCATGCTGTTCGACACGGTCAAGCAGCAAAGCCTGGGCGGCCTGTCGCTGACGGCCACGG
GCGACGTCGAGGGCATGCGCAAGACCGGCCACAAGATCGCCGACTTCATCTACCAGAAGCTGCTCGGCGTGCGTGGAGTG
TTCAGCACGCGGCTGTCCTACGTGACGCACTCGGGCGGCAAGTATCGTCTGCTGATTTCCGATTCGGACGGCGAAAATGC
GATACCGGCCCTGACCAGCTCCGAGCCGATCATCTCGCCGGCGTGGTCGCCGAGCGGCACGAAGGTTGCTTACGTGTCGT
TCGAACTGCGCAAGCCGGTCGTCTACATCCACGACCTGCCGACCGGCCGCCGCTACGTGATTTCGAACCAGAAGGGCAAC
AACAGCGCACCGGCCTGGGCGCCGGACGGCCAGACCCTCGCGGTCGCGCTGTCGCTCACCGGCAATACGCAAATCTATTC
GGTCAGCGCGACGGGCACCGGCCTGCGCCGGCTCACCCAGAGCAGCTCGATCGATACCGAACCTTTTTATTCTCCTGATG
GCCGGTGGATCTATTTCACCAGCGATCGTGGTGGTCAACCGCAGATCTACCGGATGCCCGCGCAGGGCGAGAGTGCCGGT
GCCGCGCAACGCGTGACCTTCACCGGCAGCTACAACACGAGCCCGCGGGTGAGCCCCGACGGCAAGCTGCTCGCGTACAT
CTCGCGCACCGGTGGCGGCTTCAAGCTGTATGTCCAGGATCTGCAGACCGGCGCCGCCAACGCGGTGACCAACACCACGC
ATGACGAGTCGCCGAGTTTCGCGGCAAACGGTCAGTACATTCTGTACGCGACCCGAGCCGGTGGCCGCAGCGTTCTTGCT
GCCGTTCCTTCGGACGGCAGCTCGCCGCCGCAGATTCTGCCCGTCCAGGGCGGCTCGTTCAGCGAGCCGTCTTGGGGGCC
ATTCATGCAATGA

Upstream 100 bases:

>100_bases
ATGCGCTTACACTCACCGGTCGCCGCGAGGAACGAATCGGGTATTGTTGAGTCTCTGTGCGGATGCGCAGCTACATAAGG
GAATCGGAAGCATGAGTTTG

Downstream 100 bases:

>100_bases
CCAACAGGAGATTCACCATGATGACCAATAAAGCTCGCCTGGCACTCGCCGTAATGATGATCAGCGCGCTGGCCGCGTGT
AAGTCGGGCGTCAAGCTCGA

Product: translocation protein TolB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MTKLGFRSLVASCLIAAGSAANAQVNVLITGVGSTQFPIATANFVNEAGLPQSVTAVVRADLARTGKFSNIDAGSTPISE
SAPVDYSAWKAKGANALVAGTVNREANGQVKVDFMLFDTVKQQSLGGLSLTATGDVEGMRKTGHKIADFIYQKLLGVRGV
FSTRLSYVTHSGGKYRLLISDSDGENAIPALTSSEPIISPAWSPSGTKVAYVSFELRKPVVYIHDLPTGRRYVISNQKGN
NSAPAWAPDGQTLAVALSLTGNTQIYSVSATGTGLRRLTQSSSIDTEPFYSPDGRWIYFTSDRGGQPQIYRMPAQGESAG
AAQRVTFTGSYNTSPRVSPDGKLLAYISRTGGGFKLYVQDLQTGAANAVTNTTHDESPSFAANGQYILYATRAGGRSVLA
AVPSDGSSPPQILPVQGGSFSEPSWGPFMQ

Sequences:

>Translated_430_residues
MTKLGFRSLVASCLIAAGSAANAQVNVLITGVGSTQFPIATANFVNEAGLPQSVTAVVRADLARTGKFSNIDAGSTPISE
SAPVDYSAWKAKGANALVAGTVNREANGQVKVDFMLFDTVKQQSLGGLSLTATGDVEGMRKTGHKIADFIYQKLLGVRGV
FSTRLSYVTHSGGKYRLLISDSDGENAIPALTSSEPIISPAWSPSGTKVAYVSFELRKPVVYIHDLPTGRRYVISNQKGN
NSAPAWAPDGQTLAVALSLTGNTQIYSVSATGTGLRRLTQSSSIDTEPFYSPDGRWIYFTSDRGGQPQIYRMPAQGESAG
AAQRVTFTGSYNTSPRVSPDGKLLAYISRTGGGFKLYVQDLQTGAANAVTNTTHDESPSFAANGQYILYATRAGGRSVLA
AVPSDGSSPPQILPVQGGSFSEPSWGPFMQ
>Mature_429_residues
TKLGFRSLVASCLIAAGSAANAQVNVLITGVGSTQFPIATANFVNEAGLPQSVTAVVRADLARTGKFSNIDAGSTPISES
APVDYSAWKAKGANALVAGTVNREANGQVKVDFMLFDTVKQQSLGGLSLTATGDVEGMRKTGHKIADFIYQKLLGVRGVF
STRLSYVTHSGGKYRLLISDSDGENAIPALTSSEPIISPAWSPSGTKVAYVSFELRKPVVYIHDLPTGRRYVISNQKGNN
SAPAWAPDGQTLAVALSLTGNTQIYSVSATGTGLRRLTQSSSIDTEPFYSPDGRWIYFTSDRGGQPQIYRMPAQGESAGA
AQRVTFTGSYNTSPRVSPDGKLLAYISRTGGGFKLYVQDLQTGAANAVTNTTHDESPSFAANGQYILYATRAGGRSVLAA
VPSDGSSPPQILPVQGGSFSEPSWGPFMQ

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

Organism=Escherichia coli, GI1786961, Length=430, Percent_Identity=35.5813953488372, Blast_Score=242, Evalue=3e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 45286; Mature: 45155

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLGFRSLVASCLIAAGSAANAQVNVLITGVGSTQFPIATANFVNEAGLPQSVTAVVRA
CCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEHHHHHHCCCCHHHHHHHHH
DLARTGKFSNIDAGSTPISESAPVDYSAWKAKGANALVAGTVNREANGQVKVDFMLFDTV
HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEEEHH
KQQSLGGLSLTATGDVEGMRKTGHKIADFIYQKLLGVRGVFSTRLSYVTHSGGKYRLLIS
HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEE
DSDGENAIPALTSSEPIISPAWSPSGTKVAYVSFELRKPVVYIHDLPTGRRYVISNQKGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCEEEEECCCCC
NSAPAWAPDGQTLAVALSLTGNTQIYSVSATGTGLRRLTQSSSIDTEPFYSPDGRWIYFT
CCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEEEE
SDRGGQPQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYISRTGGGFKLYVQD
CCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEE
LQTGAANAVTNTTHDESPSFAANGQYILYATRAGGRSVLAAVPSDGSSPPQILPVQGGSF
CCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCC
SEPSWGPFMQ
CCCCCCCCCC
>Mature Secondary Structure 
TKLGFRSLVASCLIAAGSAANAQVNVLITGVGSTQFPIATANFVNEAGLPQSVTAVVRA
CCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEHHHHHHCCCCHHHHHHHHH
DLARTGKFSNIDAGSTPISESAPVDYSAWKAKGANALVAGTVNREANGQVKVDFMLFDTV
HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEEEHH
KQQSLGGLSLTATGDVEGMRKTGHKIADFIYQKLLGVRGVFSTRLSYVTHSGGKYRLLIS
HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEE
DSDGENAIPALTSSEPIISPAWSPSGTKVAYVSFELRKPVVYIHDLPTGRRYVISNQKGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCEEEEECCCCC
NSAPAWAPDGQTLAVALSLTGNTQIYSVSATGTGLRRLTQSSSIDTEPFYSPDGRWIYFT
CCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEEEE
SDRGGQPQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYISRTGGGFKLYVQD
CCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEE
LQTGAANAVTNTTHDESPSFAANGQYILYATRAGGRSVLAAVPSDGSSPPQILPVQGGSF
CCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCC
SEPSWGPFMQ
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA