| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026338
Identifier: 238026338
GI number: 238026338
Start: 729262
End: 730305
Strand: Reverse
Name: 238026338
Synonym: bglu_1g06720
Alternate gene names: NA
Gene position: 730305-729262 (Counterclockwise)
Preceding gene: 238026339
Following gene: 238026337
Centisome position: 18.69
GC content: 72.89
Gene sequence:
>1044_bases ATGAACCAACGCACCCGGCGCTCCGCTTCCCCGCTGCAGCCGCCTCGCGAGCGCGGCACGGGGCGGGCGTTCGCGCTCGC GGCACTGATGCACGTGCTGCTCGCGCTGTTCCTCTATCACGGCATGCAATGGCAGAACAGCACGCCGGCCGGCGCGGAAG CCGAGCTGTGGAGCGAGGTGCCCGACTCGCCGATGCCGCGCCCCGCCCCACCACCGCCGCCGGCACGGGTGGCGCCCGCG CCGCCGCCCGCCCGGGACGACGAGGCCGAGATCGCGCTGCAGGAAAAACGCCGCAAGCAGCAGGAAGCGGCCGCGCGCGC GGCGCAGCTCGCCGAGCAGCGGCGCGAGCAGGAAAAGGCCCAGCAGGAGGCCGAGGCCAAGCGCGCGGCGCTGGCCGCGC AGCAGCTCGCCCAACGGCAGGCGGCCGAGAAGCAGCGGCAGGCCGAGAAGCTGCGCCAGCAGCAGCTTGCCGAGCAGCAG AAGAAGCTCGAACAGCAGAAGCTCGAGCAGCAGCGCAAGCAGGAGCAAGCCCAGGCCCAGGCCGATGCCGAGAAGAAGGA ACAGGCCGAGAAGGCCGCGGCGGCCAAGGCCGAAGCCGCGGCCAAGGCCAAGGCGGAAGCGGCCGCGAAGGCGAAGGCCG ACGCCGCGGCCAAGGCGCGGCTCGACAAGGAGCGCCAGGCGCGCCTCGCGCAATTGCAGAACCAGGCGGGCGGCGGCCAG GGCGGCGGCGAAGGGCTGGCCCGCAGCGGCACCGGCACCGGCTCGGGCGGCAACGCCGCGTCGCCGGGCTACGCCGACAA GGTGAAGCGCCGCGTCAAGCCGAACATCATCTGGAACGGCGAGCGCAGCGGGCTCGAAACGCGCGTGCAGGTGCGCTGCT CGCCGAACGGCGACGTGCTCGGCGTCACCGTGACGCGATCGAGCGGCAATCCCGGCTGGGACGACGCGGTCGTCAACGCC GTGCGCGCCAGCACGCCGCTGCCGCCCGATGTTAACGGAAGCACCCCTTCGAACATTACGATTACGTTCCGGGCCGCAGA ATGA
Upstream 100 bases:
>100_bases TCGCGGCCGACAAGACCGTCCAGTACGACGCGGTGATGACCGTGATGTCGGATCTGAAGGCGCGTGGCGTCAAGCGCGTG GGCCTCCTCGTCAAATCGCA
Downstream 100 bases:
>100_bases CGCGCAATGCGCTTACACTCACCGGTCGCCGCGAGGAACGAATCGGGTATTGTTGAGTCTCTGTGCGGATGCGCAGCTAC ATAAGGGAATCGGAAGCATG
Product: TonB/TolA-like protein
Products: NA
Alternate protein names: NB Family Protein; NB C-Terminal; Membrane Spanning Protein In lA-TolQ-TolR Complex; NB-Like; LA Family Protein; LA-Related Transport Transmembrane Protein; LA Protein; NB Protein; Protein la; NB-Like Protein
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MNQRTRRSASPLQPPRERGTGRAFALAALMHVLLALFLYHGMQWQNSTPAGAEAELWSEVPDSPMPRPAPPPPPARVAPA PPPARDDEAEIALQEKRRKQQEAAARAAQLAEQRREQEKAQQEAEAKRAALAAQQLAQRQAAEKQRQAEKLRQQQLAEQQ KKLEQQKLEQQRKQEQAQAQADAEKKEQAEKAAAAKAEAAAKAKAEAAAKAKADAAAKARLDKERQARLAQLQNQAGGGQ GGGEGLARSGTGTGSGGNAASPGYADKVKRRVKPNIIWNGERSGLETRVQVRCSPNGDVLGVTVTRSSGNPGWDDAVVNA VRASTPLPPDVNGSTPSNITITFRAAE
Sequences:
>Translated_347_residues MNQRTRRSASPLQPPRERGTGRAFALAALMHVLLALFLYHGMQWQNSTPAGAEAELWSEVPDSPMPRPAPPPPPARVAPA PPPARDDEAEIALQEKRRKQQEAAARAAQLAEQRREQEKAQQEAEAKRAALAAQQLAQRQAAEKQRQAEKLRQQQLAEQQ KKLEQQKLEQQRKQEQAQAQADAEKKEQAEKAAAAKAEAAAKAKAEAAAKAKADAAAKARLDKERQARLAQLQNQAGGGQ GGGEGLARSGTGTGSGGNAASPGYADKVKRRVKPNIIWNGERSGLETRVQVRCSPNGDVLGVTVTRSSGNPGWDDAVVNA VRASTPLPPDVNGSTPSNITITFRAAE >Mature_347_residues MNQRTRRSASPLQPPRERGTGRAFALAALMHVLLALFLYHGMQWQNSTPAGAEAELWSEVPDSPMPRPAPPPPPARVAPA PPPARDDEAEIALQEKRRKQQEAAARAAQLAEQRREQEKAQQEAEAKRAALAAQQLAQRQAAEKQRQAEKLRQQQLAEQQ KKLEQQKLEQQRKQEQAQAQADAEKKEQAEKAAAAKAEAAAKAKAEAAAKAKADAAAKARLDKERQARLAQLQNQAGGGQ GGGEGLARSGTGTGSGGNAASPGYADKVKRRVKPNIIWNGERSGLETRVQVRCSPNGDVLGVTVTRSSGNPGWDDAVVNA VRASTPLPPDVNGSTPSNITITFRAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37206; Mature: 37206
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRTRRSASPLQPPRERGTGRAFALAALMHVLLALFLYHGMQWQNSTPAGAEAELWSEV CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHC PDSPMPRPAPPPPPARVAPAPPPARDDEAEIALQEKRRKQQEAAARAAQLAEQRREQEKA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQEAEAKRAALAAQQLAQRQAAEKQRQAEKLRQQQLAEQQKKLEQQKLEQQRKQEQAQAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADAEKKEQAEKAAAAKAEAAAKAKAEAAAKAKADAAAKARLDKERQARLAQLQNQAGGGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GGGEGLARSGTGTGSGGNAASPGYADKVKRRVKPNIIWNGERSGLETRVQVRCSPNGDVL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEEEEEEECCCCCEE GVTVTRSSGNPGWDDAVVNAVRASTPLPPDVNGSTPSNITITFRAAE EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MNQRTRRSASPLQPPRERGTGRAFALAALMHVLLALFLYHGMQWQNSTPAGAEAELWSEV CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHC PDSPMPRPAPPPPPARVAPAPPPARDDEAEIALQEKRRKQQEAAARAAQLAEQRREQEKA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQEAEAKRAALAAQQLAQRQAAEKQRQAEKLRQQQLAEQQKKLEQQKLEQQRKQEQAQAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADAEKKEQAEKAAAAKAEAAAKAKAEAAAKAKADAAAKARLDKERQARLAQLQNQAGGGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GGGEGLARSGTGTGSGGNAASPGYADKVKRRVKPNIIWNGERSGLETRVQVRCSPNGDVL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEEEEEEECCCCCEE GVTVTRSSGNPGWDDAVVNAVRASTPLPPDVNGSTPSNITITFRAAE EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA