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The map label for this gene is secF [H]

Identifier: 238026271

GI number: 238026271

Start: 634186

End: 635136

Strand: Reverse

Name: secF [H]

Synonym: bglu_1g06040

Alternate gene names: 238026271

Gene position: 635136-634186 (Counterclockwise)

Preceding gene: 238026272

Following gene: 238026267

Centisome position: 16.26

GC content: 64.14

Gene sequence:

>951_bases
ATGGAATTTTTCCGCATTCGTAAAGACATCCCGTTCATGCGGCACGCGTTGGTGTTCAACGTGATATCGCTCGTGACGTT
CCTGGCCGCCGTGTTCTTCCTCGTGCATCGCGGCCTGCACCTGTCGGTGGAATTCACCGGCGGCACGGTGCTCGAAGTGC
AGTACCAGCAGGCGGCCGAACTCGAGCCGGTGCGCGCCGCGCTCGGCAAGCTCGGCTACGCCGACGCGCAGGTGCAGAGC
TTCGGCACCTCGCGCAACGTGATGATCCGCCTCGCGCTGAAGTCGGGCCTGACCTCGGCGCAGCAGAGCGACCAGGTGAT
GGCGGGCCTCAAGGCGCAGAACCCCGACGTGCAGCTGCAGCGCGTGGAGTTCGTCGGCCCGCAGGTCGGCAAGGAACTCG
CCACCGACGGCCTGCTCGCGCTGGCCTGCGTGGTGATCGGCATCGTGATCTACCTGTCGTTCCGCTTCGAGTGGAAATAC
GCGGTGGCCGGCATCATCGCCAACCTGCACGACGTGGTGATCATTCTCGGCTTCTTCGCGTTCTTCCAGTGGGAGTTCTC
GCTGTCGGTGCTGGCCGCGGTGCTGGCCGTGCTGGGCTACTCGGTCAACGAATCGGTCGTGATCTTCGACCGGATCCGCG
AGACCTTCCGCCGCGAGCGCAGGATGACCGTGCAGGAAGTGATCAACCACGCGATCACGAGCACCATGTCGCGAACCGTC
ATCACGCACACCTCGACCGAAATGATGGTGCTGTCGATGTTCTTCTTCGGCGGCCCGACGCTGCACTACTTCGCGCTGGC
GCTGACGGTCGGCATCATGTTCGGCATCTATTCGTCGGTGTTCGTGGCGGGCTCGCTCGCGATGTGGCTCGGCATCCGCC
GCGAGGATCTGATCCGCGACAAGAAGGGCGCGCACGATCCGAACGATCCGAACGCGGGCGCGCAAGTCTGA

Upstream 100 bases:

>100_bases
ACCGCGGCGCGCGGCGCGAAGCCGGTGGCACGCCGCCGCTCCGGCCCCGGCGTCCCGCCGAAGAAGCCGGGTTCGTCCCA
ATAAGCGCCGGAGAACGCAC

Downstream 100 bases:

>100_bases
GGCGCGGCGCCCGGCACCTGGCGTCACCCGGAAAACCGGCCCGGCGGGCCGGTTTTTTTTCGTCCGCGAGGCGCTCCGAC
GGCCGGTGCGGCGCCGCACG

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MEFFRIRKDIPFMRHALVFNVISLVTFLAAVFFLVHRGLHLSVEFTGGTVLEVQYQQAAELEPVRAALGKLGYADAQVQS
FGTSRNVMIRLALKSGLTSAQQSDQVMAGLKAQNPDVQLQRVEFVGPQVGKELATDGLLALACVVIGIVIYLSFRFEWKY
AVAGIIANLHDVVIILGFFAFFQWEFSLSVLAAVLAVLGYSVNESVVIFDRIRETFRRERRMTVQEVINHAITSTMSRTV
ITHTSTEMMVLSMFFFGGPTLHYFALALTVGIMFGIYSSVFVAGSLAMWLGIRREDLIRDKKGAHDPNDPNAGAQV

Sequences:

>Translated_316_residues
MEFFRIRKDIPFMRHALVFNVISLVTFLAAVFFLVHRGLHLSVEFTGGTVLEVQYQQAAELEPVRAALGKLGYADAQVQS
FGTSRNVMIRLALKSGLTSAQQSDQVMAGLKAQNPDVQLQRVEFVGPQVGKELATDGLLALACVVIGIVIYLSFRFEWKY
AVAGIIANLHDVVIILGFFAFFQWEFSLSVLAAVLAVLGYSVNESVVIFDRIRETFRRERRMTVQEVINHAITSTMSRTV
ITHTSTEMMVLSMFFFGGPTLHYFALALTVGIMFGIYSSVFVAGSLAMWLGIRREDLIRDKKGAHDPNDPNAGAQV
>Mature_316_residues
MEFFRIRKDIPFMRHALVFNVISLVTFLAAVFFLVHRGLHLSVEFTGGTVLEVQYQQAAELEPVRAALGKLGYADAQVQS
FGTSRNVMIRLALKSGLTSAQQSDQVMAGLKAQNPDVQLQRVEFVGPQVGKELATDGLLALACVVIGIVIYLSFRFEWKY
AVAGIIANLHDVVIILGFFAFFQWEFSLSVLAAVLAVLGYSVNESVVIFDRIRETFRRERRMTVQEVINHAITSTMSRTV
ITHTSTEMMVLSMFFFGGPTLHYFALALTVGIMFGIYSSVFVAGSLAMWLGIRREDLIRDKKGAHDPNDPNAGAQV

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=307, Percent_Identity=39.413680781759, Blast_Score=241, Evalue=6e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35107; Mature: 35107

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFRIRKDIPFMRHALVFNVISLVTFLAAVFFLVHRGLHLSVEFTGGTVLEVQYQQAAE
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEHHHHHC
LEPVRAALGKLGYADAQVQSFGTSRNVMIRLALKSGLTSAQQSDQVMAGLKAQNPDVQLQ
CCHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEHHHCCCCHHHHHHHHHCCCCCCCCCEEE
RVEFVGPQVGKELATDGLLALACVVIGIVIYLSFRFEWKYAVAGIIANLHDVVIILGFFA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFQWEFSLSVLAAVLAVLGYSVNESVVIFDRIRETFRRERRMTVQEVINHAITSTMSRTV
HHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ITHTSTEMMVLSMFFFGGPTLHYFALALTVGIMFGIYSSVFVAGSLAMWLGIRREDLIRD
EEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KKGAHDPNDPNAGAQV
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEFFRIRKDIPFMRHALVFNVISLVTFLAAVFFLVHRGLHLSVEFTGGTVLEVQYQQAAE
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEHHHHHC
LEPVRAALGKLGYADAQVQSFGTSRNVMIRLALKSGLTSAQQSDQVMAGLKAQNPDVQLQ
CCHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEHHHCCCCHHHHHHHHHCCCCCCCCCEEE
RVEFVGPQVGKELATDGLLALACVVIGIVIYLSFRFEWKYAVAGIIANLHDVVIILGFFA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFQWEFSLSVLAAVLAVLGYSVNESVVIFDRIRETFRRERRMTVQEVINHAITSTMSRTV
HHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ITHTSTEMMVLSMFFFGGPTLHYFALALTVGIMFGIYSSVFVAGSLAMWLGIRREDLIRD
EEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KKGAHDPNDPNAGAQV
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]