| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pepP [H]
Identifier: 238026252
GI number: 238026252
Start: 614119
End: 615546
Strand: Reverse
Name: pepP [H]
Synonym: bglu_1g05850
Alternate gene names: 238026252
Gene position: 615546-614119 (Counterclockwise)
Preceding gene: 238026254
Following gene: 238026251
Centisome position: 15.76
GC content: 73.18
Gene sequence:
>1428_bases ATGAACGCGCCGACCGATACCTGCCTCGTCCCCGACGTCTACCGCCAGCGCCGCGCGCGCGTGCTCGCCGCCTTGCGCGC GACGGGCGGCGGCGTCGCGATCGTCCCCACCGCGCCCCAGGCGCTGCGCAACCGCGATGCCGATTATCCGTATCGGCACG ACAGCTACTTCTATTACCTGACCGGCTTCAGCGAGCCCGACGCGCTGCTCGTGCTCGATGCGAACGCCGCCGACGGCGCG CCGCAATCGATCCTGTTCTGTCGTGCGAAGCATCCCGAGCGCGAGATCTGGGAAGGCTTCCACTATGGGCCGGACGGCGC GCGCGACGCGTTCGGCTTCGATGCCGCGTTCGCCAGCGACGCGCTCGACACCGAGATGCCGCGGCTCCTCGCCGATGCCG GCGCGCTTCATTACCGCTTCGGCGCGTCGGCCGAGTTCGAGCGCCGGCTCGCGGGCTGGCTCGAGGCGGTGCGCGCGAAG AGCCGGGCCGGCGTCGCCGCGCCGGCCTCCGCGCACGATCTCACGCCGCTGCTCGACGAGATGCGCATCGTCAAGGACGC CCACGAGCAGGCGATCATGCGCCGCGCCGCCGTGATCTCCGCGAGCGCGCACCGGCGCGCGATGGCGGTGACGCGGCCGG GCATCCGCGAATACGAGATCGAGGCCGAACTGCTCCACGAATTCCGCCGCCACGGCGCGGCCGGCCCCGCCTACGGCTCG ATCGTCGCGGCCGGCGCGAACGCCTGCGTGCTGCACTATCCGGCCGGCAACGCGGTGGCGCGCGACGGCGATCTGATCCT GATCGACGCGGCCTGCGAACTGGAAGGCTACGCCTCCGACATCACGCGCACGTTTCCCGCCAACGGCCGCTTCTCCGGCC CGCAGCGTGCGCTCTACGACATCGTGCTCGCCGCGCAGGCCGCGGCTGCGGCCGCCACGCGGCCCGGCGCGGCATTCGAG GCGCCGCACGAGGCCGCCGTGCGCGTGCTCGCGCAAGGGCTGCTCGACACCGGCATCGTGCCGAAGTCGCGCTTCGCGAG CGTCGACGACGTCGTGGCCGAGCGCGCCTACGCGCGCTTCTACATGCACCGCACCGGCCACTGGCTCGGCATGGACGTCC ACGACTGCGGCGACTACCGCGAGCGCGGCGCCGCGCGCGACGCGCAGGGCGCGCTGCCATGGCGCACGCTGCGCGAGGGC ATGGCGCTGACGATCGAGCCGGGCCTCTACGTGCGCGCGGCCGACGACGTGCCGGCCCGATTCCACGATATCGGCATCCG CATCGAGGACGACGCATTCGTCACCGCCGCCGGCTGCGAACTGATCACGCGCGACGTGCCGGTGGACGCCGACGAGATCG AGGCGCTGATGCGCGACGCGCACGGCACCTCGGGCCCGTCCGGCACTACGCCGCCGGCGCGGCCGTGA
Upstream 100 bases:
>100_bases TCCGCGCCGCGGCGCGCCGCCGTCCGCCCGCCCGCCCGCCCGCCCGCCCGGCGCATGGTGCCGAAGCGCAGCGCGCGCGC CACAGCGCTACAATCGCCCC
Downstream 100 bases:
>100_bases CCGGCGCGCCGGCGTGCCGCCTCCCCCGAACCCGCTCCCCCGCTTTCGCCCGATGACCACCTCCGCTCCGCTTGCGCCCG CCGCCGCACCGTTCGACGCC
Product: peptidase M24B
Products: NA
Alternate protein names: Aminoacylproline aminopeptidase; Aminopeptidase P II; APP-II; X-Pro aminopeptidase [H]
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MNAPTDTCLVPDVYRQRRARVLAALRATGGGVAIVPTAPQALRNRDADYPYRHDSYFYYLTGFSEPDALLVLDANAADGA PQSILFCRAKHPEREIWEGFHYGPDGARDAFGFDAAFASDALDTEMPRLLADAGALHYRFGASAEFERRLAGWLEAVRAK SRAGVAAPASAHDLTPLLDEMRIVKDAHEQAIMRRAAVISASAHRRAMAVTRPGIREYEIEAELLHEFRRHGAAGPAYGS IVAAGANACVLHYPAGNAVARDGDLILIDAACELEGYASDITRTFPANGRFSGPQRALYDIVLAAQAAAAAATRPGAAFE APHEAAVRVLAQGLLDTGIVPKSRFASVDDVVAERAYARFYMHRTGHWLGMDVHDCGDYRERGAARDAQGALPWRTLREG MALTIEPGLYVRAADDVPARFHDIGIRIEDDAFVTAAGCELITRDVPVDADEIEALMRDAHGTSGPSGTTPPARP
Sequences:
>Translated_475_residues MNAPTDTCLVPDVYRQRRARVLAALRATGGGVAIVPTAPQALRNRDADYPYRHDSYFYYLTGFSEPDALLVLDANAADGA PQSILFCRAKHPEREIWEGFHYGPDGARDAFGFDAAFASDALDTEMPRLLADAGALHYRFGASAEFERRLAGWLEAVRAK SRAGVAAPASAHDLTPLLDEMRIVKDAHEQAIMRRAAVISASAHRRAMAVTRPGIREYEIEAELLHEFRRHGAAGPAYGS IVAAGANACVLHYPAGNAVARDGDLILIDAACELEGYASDITRTFPANGRFSGPQRALYDIVLAAQAAAAAATRPGAAFE APHEAAVRVLAQGLLDTGIVPKSRFASVDDVVAERAYARFYMHRTGHWLGMDVHDCGDYRERGAARDAQGALPWRTLREG MALTIEPGLYVRAADDVPARFHDIGIRIEDDAFVTAAGCELITRDVPVDADEIEALMRDAHGTSGPSGTTPPARP >Mature_475_residues MNAPTDTCLVPDVYRQRRARVLAALRATGGGVAIVPTAPQALRNRDADYPYRHDSYFYYLTGFSEPDALLVLDANAADGA PQSILFCRAKHPEREIWEGFHYGPDGARDAFGFDAAFASDALDTEMPRLLADAGALHYRFGASAEFERRLAGWLEAVRAK SRAGVAAPASAHDLTPLLDEMRIVKDAHEQAIMRRAAVISASAHRRAMAVTRPGIREYEIEAELLHEFRRHGAAGPAYGS IVAAGANACVLHYPAGNAVARDGDLILIDAACELEGYASDITRTFPANGRFSGPQRALYDIVLAAQAAAAAATRPGAAFE APHEAAVRVLAQGLLDTGIVPKSRFASVDDVVAERAYARFYMHRTGHWLGMDVHDCGDYRERGAARDAQGALPWRTLREG MALTIEPGLYVRAADDVPARFHDIGIRIEDDAFVTAAGCELITRDVPVDADEIEALMRDAHGTSGPSGTTPPARP
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=458, Percent_Identity=31.2227074235808, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI149589008, Length=489, Percent_Identity=30.0613496932515, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI260593665, Length=309, Percent_Identity=37.2168284789644, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI260593663, Length=363, Percent_Identity=31.6804407713499, Blast_Score=142, Evalue=5e-34, Organism=Escherichia coli, GI1789275, Length=442, Percent_Identity=42.3076923076923, Blast_Score=348, Evalue=3e-97, Organism=Escherichia coli, GI1788728, Length=329, Percent_Identity=30.0911854103343, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790282, Length=294, Percent_Identity=29.9319727891156, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17508215, Length=491, Percent_Identity=31.5682281059063, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71989583, Length=300, Percent_Identity=32, Blast_Score=122, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6320922, Length=424, Percent_Identity=27.122641509434, Blast_Score=179, Evalue=7e-46, Organism=Saccharomyces cerevisiae, GI6321118, Length=435, Percent_Identity=29.1954022988506, Blast_Score=161, Evalue=2e-40, Organism=Drosophila melanogaster, GI19920384, Length=483, Percent_Identity=33.5403726708075, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI21357079, Length=494, Percent_Identity=30.9716599190283, Blast_Score=201, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR007865 - InterPro: IPR001131 [H]
Pfam domain/function: PF05195 AMP_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.11.9 [H]
Molecular weight: Translated: 51240; Mature: 51240
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS00491 PROLINE_PEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPTDTCLVPDVYRQRRARVLAALRATGGGVAIVPTAPQALRNRDADYPYRHDSYFYYL CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCCCCCCCEEEEE TGFSEPDALLVLDANAADGAPQSILFCRAKHPEREIWEGFHYGPDGARDAFGFDAAFASD ECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHH ALDTEMPRLLADAGALHYRFGASAEFERRLAGWLEAVRAKSRAGVAAPASAHDLTPLLDE HHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH MRIVKDAHEQAIMRRAAVISASAHRRAMAVTRPGIREYEIEAELLHEFRRHGAAGPAYGS HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCC IVAAGANACVLHYPAGNAVARDGDLILIDAACELEGYASDITRTFPANGRFSGPQRALYD EEECCCCEEEEECCCCCCEECCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHH IVLAAQAAAAAATRPGAAFEAPHEAAVRVLAQGLLDTGIVPKSRFASVDDVVAERAYARF HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHH YMHRTGHWLGMDVHDCGDYRERGAARDAQGALPWRTLREGMALTIEPGLYVRAADDVPAR HHHHCCCEEECCHHHCCCHHHHCCCCCCCCCCCHHHHHCCCEEEECCCEEEEECCCCCCC FHDIGIRIEDDAFVTAAGCELITRDVPVDADEIEALMRDAHGTSGPSGTTPPARP HHHCCCEECCCCEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNAPTDTCLVPDVYRQRRARVLAALRATGGGVAIVPTAPQALRNRDADYPYRHDSYFYYL CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCCCCCCCEEEEE TGFSEPDALLVLDANAADGAPQSILFCRAKHPEREIWEGFHYGPDGARDAFGFDAAFASD ECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHH ALDTEMPRLLADAGALHYRFGASAEFERRLAGWLEAVRAKSRAGVAAPASAHDLTPLLDE HHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH MRIVKDAHEQAIMRRAAVISASAHRRAMAVTRPGIREYEIEAELLHEFRRHGAAGPAYGS HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCC IVAAGANACVLHYPAGNAVARDGDLILIDAACELEGYASDITRTFPANGRFSGPQRALYD EEECCCCEEEEECCCCCCEECCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHH IVLAAQAAAAAATRPGAAFEAPHEAAVRVLAQGLLDTGIVPKSRFASVDDVVAERAYARF HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHH YMHRTGHWLGMDVHDCGDYRERGAARDAQGALPWRTLREGMALTIEPGLYVRAADDVPAR HHHHCCCEEECCHHHCCCHHHHCCCCCCCCCCCHHHHHCCCEEEECCCEEEEECCCCCCC FHDIGIRIEDDAFVTAAGCELITRDVPVDADEIEALMRDAHGTSGPSGTTPPARP HHHCCCEECCCCEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2659585; 1339425; 9278503; 9520390 [H]