| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is gpmB [H]
Identifier: 238026242
GI number: 238026242
Start: 603898
End: 604560
Strand: Direct
Name: gpmB [H]
Synonym: bglu_1g05750
Alternate gene names: 238026242
Gene position: 603898-604560 (Clockwise)
Preceding gene: 238026241
Following gene: 238026253
Centisome position: 15.46
GC content: 72.4
Gene sequence:
>663_bases ATGACCACGACGCAAATCCTCTTCATCCGCCACGGCGAAACGCCCTGGAACCGCATCAAGCGCATTCAGGGGCATATCGA CATCGCGCTCGCCGAGACCGGCGTCCAGCAGGCGGCGCGGCTCGCCGAGCGGCTCGCGCGCGAGGCGGCCGATGGCGCCC GGCTCGACGCGATCTATTCGAGCGATCTGCAGCGCGCGCGGCAGACCGCGCAGCCGAGCGCCGATGCCCTCGGCCTGCCG GTGCGGCTCGACGCCGGGCTGCGCGAGCGCGCCTACGGCGCGTTCCAGGGCCACGACAGCGCCGAGATCGCCGCGCGCTA TCCCGATGCCTATGCGCAGTGGCAGACGCGCGACCCCGGCTTCGAGCCGGCCGGCGGCGAATCGCATCGCGCGTTCCATC ACCGCGTGCTGCATGCGCTCGCGCCGATCGTGGCCGCGCATCCGGGCGGCCGCATTGCCGTGGTCACGCACGGCGGCGTG CTCGATTGCATCTATCGCCGCGCGGCCTCGCTGCCGCTCGAGGCGCCGCGCCAGTACGCGCTGCTCAACGCCAGCATCAA CGTGGTCGAGGCCGACGGCAACGCGCTGCGCGTCGTGCGCTGGGCCGACGTCGCGCATCTCGACGGCGACAGCGACGACG ACGGCTACCGCAAGGTGCTGTAG
Upstream 100 bases:
>100_bases CTCGCGCCTGACAGGCCGGCGCGCGACGGACCCGCGCCGGCCGGCTGCCGCGCCCGCTCGGCTCACTGCTTCGCTTCTTC GCATTCCGATCGGCCAACCG
Downstream 100 bases:
>100_bases ACGATCACGGCCCCGCGCTCGCGGTGCCGTGGTGCGGTGCCGTTCCTGCCGCCCCTGCGCGGTTCACGGCAGGCCGTGGC GCGCCTTGTAGGCGAGCGCG
Product: phosphoglycerate mutase family protein
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTTTQILFIRHGETPWNRIKRIQGHIDIALAETGVQQAARLAERLAREAADGARLDAIYSSDLQRARQTAQPSADALGLP VRLDAGLRERAYGAFQGHDSAEIAARYPDAYAQWQTRDPGFEPAGGESHRAFHHRVLHALAPIVAAHPGGRIAVVTHGGV LDCIYRRAASLPLEAPRQYALLNASINVVEADGNALRVVRWADVAHLDGDSDDDGYRKVL
Sequences:
>Translated_220_residues MTTTQILFIRHGETPWNRIKRIQGHIDIALAETGVQQAARLAERLAREAADGARLDAIYSSDLQRARQTAQPSADALGLP VRLDAGLRERAYGAFQGHDSAEIAARYPDAYAQWQTRDPGFEPAGGESHRAFHHRVLHALAPIVAAHPGGRIAVVTHGGV LDCIYRRAASLPLEAPRQYALLNASINVVEADGNALRVVRWADVAHLDGDSDDDGYRKVL >Mature_219_residues TTTQILFIRHGETPWNRIKRIQGHIDIALAETGVQQAARLAERLAREAADGARLDAIYSSDLQRARQTAQPSADALGLPV RLDAGLRERAYGAFQGHDSAEIAARYPDAYAQWQTRDPGFEPAGGESHRAFHHRVLHALAPIVAAHPGGRIAVVTHGGVL DCIYRRAASLPLEAPRQYALLNASINVVEADGNALRVVRWADVAHLDGDSDDDGYRKVL
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=218, Percent_Identity=32.1100917431193, Blast_Score=87, Evalue=6e-19, Organism=Escherichia coli, GI1786970, Length=119, Percent_Identity=39.4957983193277, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786857, Length=174, Percent_Identity=28.735632183908, Blast_Score=68, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324857, Length=215, Percent_Identity=29.7674418604651, Blast_Score=75, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6322697, Length=222, Percent_Identity=28.8288288288288, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 23990; Mature: 23859
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTQILFIRHGETPWNRIKRIQGHIDIALAETGVQQAARLAERLAREAADGARLDAIYS CCCEEEEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SDLQRARQTAQPSADALGLPVRLDAGLRERAYGAFQGHDSAEIAARYPDAYAQWQTRDPG HHHHHHHHHCCCCCCCCCCCEEECCCCHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCC FEPAGGESHRAFHHRVLHALAPIVAAHPGGRIAVVTHGGVLDCIYRRAASLPLEAPRQYA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCEE LLNASINVVEADGNALRVVRWADVAHLDGDSDDDGYRKVL EEECEEEEEECCCCEEEEEEEECEEECCCCCCCCHHHCCC >Mature Secondary Structure TTTQILFIRHGETPWNRIKRIQGHIDIALAETGVQQAARLAERLAREAADGARLDAIYS CCEEEEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SDLQRARQTAQPSADALGLPVRLDAGLRERAYGAFQGHDSAEIAARYPDAYAQWQTRDPG HHHHHHHHHCCCCCCCCCCCEEECCCCHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCC FEPAGGESHRAFHHRVLHALAPIVAAHPGGRIAVVTHGGVLDCIYRRAASLPLEAPRQYA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCEE LLNASINVVEADGNALRVVRWADVAHLDGDSDDDGYRKVL EEECEEEEEECCCCEEEEEEEECEEECCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA