| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is gntP [H]
Identifier: 238026223
GI number: 238026223
Start: 585069
End: 586433
Strand: Direct
Name: gntP [H]
Synonym: bglu_1g05540
Alternate gene names: 238026223
Gene position: 585069-586433 (Clockwise)
Preceding gene: 238026222
Following gene: 238026224
Centisome position: 14.98
GC content: 66.89
Gene sequence:
>1365_bases ATGGGGGCAGTACAAGGCAGCATGCTGCTGGTGTGCGCGCTGATCGCGATCGTGTTGCTGATCGTGCTGATCGCGCGCTA CAAGATTTATCCGTTCCTCGTGCTGATCATCGTCTCGCTCGGCCTCGGCCTCGTGGTCGGGATGCCGATGGACAAGATCG TCAAGTCGTTCGAGACCGGCAACGGCAACACGCTCGGCCACATCGCGATCGTGGTGGGCCTCGGCACGATGCTCGGCAAG ATGATGGCCGAGTCGGGCGGCGCCGAACGGATCGCCACCACCATGATCGGCTGGTTCGGCGAGAAAAACATTCACTGGGC GATGCTGTGCGTCGCGATGATCATCGGCCTGCCGGTGTTCTTCGAGGTCGGCTTCGTGCTGCTGATTCCGATCGCGTTCA ACGTCGCCAAGCGCACCGGCAAGTCGCTGCTGCTGGTGGGCCTGCCGATGGTGGCGGGCCTGTCCGTGGTGCACGGCCTG ATTCCGCCGCACCCGGCCGCGCTGCTCGCGGTGCAGGCGTTCGGTGCCGACATCGGCAAGACGATTGCCTATGGCCTGGT CGTCGGCATCCCGACCGCGATCATCGCCGGGCCGTTGTTCGCGCTGGTGATCCACAAGTACGTGAAGCTGCCGGAGCATA ACCCGCTCGCCTCGCAGTTCGTCGATTCGGGCGACCGGGCGCGGCGCGACCGCGAGCTGCCGGGCTTCGGCATCACGCTG TTTACGGTCCTGCTGCCGGTGGTGCTGATGCTGGTCGGCAGCTGGGCCGACCTGCTGTTCGCGCCGAAGACGCTGCCGAA CAACCTGCTGCGCTTCGCCGGCACCTCCGACGTCGCGCTGCTGATCGCGGTGCTGGTCAGCTTCTGGACCTTCGGCGCGA AGCAGGGCTTCAACCGCGAGCAGATCCAGAAATTCTGCGGCGAGTGCCTCGCGCCGATCGCCGGCATCACGCTGATCGTC GGCGCCGGCGGCGGCTTCGGCGGCGTGCTGCGCGACAGCGGCATCTCGCAGCAGATCGTCGCCACGGCCACGCAGGCCCA CCTGTCGCCGCTGCTGCTCGGCTGGTTCGCCGCCGCGCTGATCCGGCTCGCGACCGGCTCGGCGACGGTGGCCATGACGA CCGCCTGCGGCATCGTCGCGCCGATCGCGGCGGCCGCCGGCGGCACGGTGAAGCCCGAACTGCTGGTGCTCGCCACCGGC TCCGGCTCGCTGATCTTTTCGCACGTGAACGACGGCGGATTCTGGCTGATCAAGGAATACTTCGGGATGACGGTCGGCCA GACCTTCAAGACCTGGACGGCGCTCGAGACGCTGATCTCGCTGCTCGGGCTCGGCTTCACGATGGTGCTCGCCACCGTTC TGTAA
Upstream 100 bases:
>100_bases GAAACGAAAGTAGAATTCAGCGTCCCGCCGTGCGGGGCGTCAGAGAACACCGGGCGCCGCAGTCTGGCCGGCCCGGTTTC AACAATCGAAGGAGGAGTCC
Downstream 100 bases:
>100_bases CAAGCAAGGGGTAGTCAATGATTTTGATCGCAATGGGCGTCTCGGGCGCCGGCAAGACGCGGATCGGCGAACTGCTGGCG GAGCGGCTCGGCTGCACGTT
Product: H+ gluconate symporter
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MGAVQGSMLLVCALIAIVLLIVLIARYKIYPFLVLIIVSLGLGLVVGMPMDKIVKSFETGNGNTLGHIAIVVGLGTMLGK MMAESGGAERIATTMIGWFGEKNIHWAMLCVAMIIGLPVFFEVGFVLLIPIAFNVAKRTGKSLLLVGLPMVAGLSVVHGL IPPHPAALLAVQAFGADIGKTIAYGLVVGIPTAIIAGPLFALVIHKYVKLPEHNPLASQFVDSGDRARRDRELPGFGITL FTVLLPVVLMLVGSWADLLFAPKTLPNNLLRFAGTSDVALLIAVLVSFWTFGAKQGFNREQIQKFCGECLAPIAGITLIV GAGGGFGGVLRDSGISQQIVATATQAHLSPLLLGWFAAALIRLATGSATVAMTTACGIVAPIAAAAGGTVKPELLVLATG SGSLIFSHVNDGGFWLIKEYFGMTVGQTFKTWTALETLISLLGLGFTMVLATVL
Sequences:
>Translated_454_residues MGAVQGSMLLVCALIAIVLLIVLIARYKIYPFLVLIIVSLGLGLVVGMPMDKIVKSFETGNGNTLGHIAIVVGLGTMLGK MMAESGGAERIATTMIGWFGEKNIHWAMLCVAMIIGLPVFFEVGFVLLIPIAFNVAKRTGKSLLLVGLPMVAGLSVVHGL IPPHPAALLAVQAFGADIGKTIAYGLVVGIPTAIIAGPLFALVIHKYVKLPEHNPLASQFVDSGDRARRDRELPGFGITL FTVLLPVVLMLVGSWADLLFAPKTLPNNLLRFAGTSDVALLIAVLVSFWTFGAKQGFNREQIQKFCGECLAPIAGITLIV GAGGGFGGVLRDSGISQQIVATATQAHLSPLLLGWFAAALIRLATGSATVAMTTACGIVAPIAAAAGGTVKPELLVLATG SGSLIFSHVNDGGFWLIKEYFGMTVGQTFKTWTALETLISLLGLGFTMVLATVL >Mature_453_residues GAVQGSMLLVCALIAIVLLIVLIARYKIYPFLVLIIVSLGLGLVVGMPMDKIVKSFETGNGNTLGHIAIVVGLGTMLGKM MAESGGAERIATTMIGWFGEKNIHWAMLCVAMIIGLPVFFEVGFVLLIPIAFNVAKRTGKSLLLVGLPMVAGLSVVHGLI PPHPAALLAVQAFGADIGKTIAYGLVVGIPTAIIAGPLFALVIHKYVKLPEHNPLASQFVDSGDRARRDRELPGFGITLF TVLLPVVLMLVGSWADLLFAPKTLPNNLLRFAGTSDVALLIAVLVSFWTFGAKQGFNREQIQKFCGECLAPIAGITLIVG AGGGFGGVLRDSGISQQIVATATQAHLSPLLLGWFAAALIRLATGSATVAMTTACGIVAPIAAAAGGTVKPELLVLATGS GSLIFSHVNDGGFWLIKEYFGMTVGQTFKTWTALETLISLLGLGFTMVLATVL
Specific function: Part Of The Gluconate Utilization System Gnt-I; High- Affinity Intake Of Gluconate. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994935, Length=438, Percent_Identity=45.4337899543379, Blast_Score=360, Evalue=1e-101, Organism=Escherichia coli, GI1790716, Length=432, Percent_Identity=42.3611111111111, Blast_Score=338, Evalue=6e-94, Organism=Escherichia coli, GI2367370, Length=430, Percent_Identity=40.9302325581395, Blast_Score=306, Evalue=2e-84, Organism=Escherichia coli, GI1788707, Length=444, Percent_Identity=40.3153153153153, Blast_Score=301, Evalue=4e-83, Organism=Escherichia coli, GI1790776, Length=440, Percent_Identity=34.0909090909091, Blast_Score=258, Evalue=7e-70, Organism=Escherichia coli, GI48994939, Length=436, Percent_Identity=36.4678899082569, Blast_Score=245, Evalue=5e-66, Organism=Escherichia coli, GI1789097, Length=450, Percent_Identity=34, Blast_Score=214, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 47483; Mature: 47352
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAVQGSMLLVCALIAIVLLIVLIARYKIYPFLVLIIVSLGLGLVVGMPMDKIVKSFETG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC NGNTLGHIAIVVGLGTMLGKMMAESGGAERIATTMIGWFGEKNIHWAMLCVAMIIGLPVF CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH FEVGFVLLIPIAFNVAKRTGKSLLLVGLPMVAGLSVVHGLIPPHPAALLAVQAFGADIGK HHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH TIAYGLVVGIPTAIIAGPLFALVIHKYVKLPEHNPLASQFVDSGDRARRDRELPGFGITL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHCCCCCCCHHHH FTVLLPVVLMLVGSWADLLFAPKTLPNNLLRFAGTSDVALLIAVLVSFWTFGAKQGFNRE HHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHH QIQKFCGECLAPIAGITLIVGAGGGFGGVLRDSGISQQIVATATQAHLSPLLLGWFAAAL HHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IRLATGSATVAMTTACGIVAPIAAAAGGTVKPELLVLATGSGSLIFSHVNDGGFWLIKEY HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCEEHHHHH FGMTVGQTFKTWTALETLISLLGLGFTMVLATVL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GAVQGSMLLVCALIAIVLLIVLIARYKIYPFLVLIIVSLGLGLVVGMPMDKIVKSFETG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC NGNTLGHIAIVVGLGTMLGKMMAESGGAERIATTMIGWFGEKNIHWAMLCVAMIIGLPVF CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH FEVGFVLLIPIAFNVAKRTGKSLLLVGLPMVAGLSVVHGLIPPHPAALLAVQAFGADIGK HHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH TIAYGLVVGIPTAIIAGPLFALVIHKYVKLPEHNPLASQFVDSGDRARRDRELPGFGITL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHCCCCCCCHHHH FTVLLPVVLMLVGSWADLLFAPKTLPNNLLRFAGTSDVALLIAVLVSFWTFGAKQGFNRE HHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHH QIQKFCGECLAPIAGITLIVGAGGGFGGVLRDSGISQQIVATATQAHLSPLLLGWFAAAL HHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IRLATGSATVAMTTACGIVAPIAAAAGGTVKPELLVLATGSGSLIFSHVNDGGFWLIKEY HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCEEHHHHH FGMTVGQTFKTWTALETLISLLGLGFTMVLATVL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA