Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is eda [H]

Identifier: 238026222

GI number: 238026222

Start: 583905

End: 584531

Strand: Direct

Name: eda [H]

Synonym: bglu_1g05530

Alternate gene names: 238026222

Gene position: 583905-584531 (Clockwise)

Preceding gene: 238026221

Following gene: 238026223

Centisome position: 14.95

GC content: 70.81

Gene sequence:

>627_bases
ATGAAGACGATCCACGACATCGTGAAACTCGGCCCGGTGATTCCGGTGCTCGCGTTCGAGACGGTCGAGCAGGGCGAGCA
CGTGTCGCGCGCGCTGCACGCGGGCGGCGTGAAGGTGCTGGAGATCACGCTGCGCACCGAGGCCGGACTGAAGGCGATCG
AACGCGCGAGCCAGCTCGCCGACGACATCGTGGTCGGTGTCGGCACCATCACGAAGCCCGAGCACTGCGCGCTCGCCAAG
CAGGCCGGCGCGCAGTTCGGCGTGTCGCCGGGCCTCACCAGGGACATGCACCGGGCCGCGAGCGACGCGGGCCTGCCGCT
GCTGCCCGGCGTGATGACGCCGACCGACATCATCACCGCGCTCGAGCTCGGCTATGAGGTGGTGAAGTTCTTCCCGGCGC
AGCAGGCGGGCGGCATCCCGATGCTGCAGGCGTTCCACGGCCCGTTCCCGACGCTGAAGTTCTGCCCGACCGGCGGCATC
AGTGCGCAGACGGCGCCCGATTTCCTCAAGCAGCCGAACGTGGTCTGCGTGGGCGGCTCGTGGCTGACGCCCAAGGCCGC
GCTCGCGGCCCAGGACTGGGCCGAGGTCACGCGGCTCGCCCAGGCGGCGAGCCAGCTGGCCCGCTGA

Upstream 100 bases:

>100_bases
ACGCACTGAGCCGCATGGCATGGAACCGAATCGGGCCGGTCGCGCCACGGCGAATCCGCCGCGGCCCGGCCCACGCATCG
AATCATAGGAGAAGCAGCAG

Downstream 100 bases:

>100_bases
TCCGCCCCGCCGGGCGGCCCGCTCGGCCGAATCGGCTCGAATCGTCGCCGGGCCGGCCGGCGGGAGCGATGGTTGCGTGC
GCATCCGCCGGCGCGTGTCC

Product: 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase

Products: NA

Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase; 2-keto-4-hydroxyglutarate aldolase; KHG-aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKTIHDIVKLGPVIPVLAFETVEQGEHVSRALHAGGVKVLEITLRTEAGLKAIERASQLADDIVVGVGTITKPEHCALAK
QAGAQFGVSPGLTRDMHRAASDAGLPLLPGVMTPTDIITALELGYEVVKFFPAQQAGGIPMLQAFHGPFPTLKFCPTGGI
SAQTAPDFLKQPNVVCVGGSWLTPKAALAAQDWAEVTRLAQAASQLAR

Sequences:

>Translated_208_residues
MKTIHDIVKLGPVIPVLAFETVEQGEHVSRALHAGGVKVLEITLRTEAGLKAIERASQLADDIVVGVGTITKPEHCALAK
QAGAQFGVSPGLTRDMHRAASDAGLPLLPGVMTPTDIITALELGYEVVKFFPAQQAGGIPMLQAFHGPFPTLKFCPTGGI
SAQTAPDFLKQPNVVCVGGSWLTPKAALAAQDWAEVTRLAQAASQLAR
>Mature_208_residues
MKTIHDIVKLGPVIPVLAFETVEQGEHVSRALHAGGVKVLEITLRTEAGLKAIERASQLADDIVVGVGTITKPEHCALAK
QAGAQFGVSPGLTRDMHRAASDAGLPLLPGVMTPTDIITALELGYEVVKFFPAQQAGGIPMLQAFHGPFPTLKFCPTGGI
SAQTAPDFLKQPNVVCVGGSWLTPKAALAAQDWAEVTRLAQAASQLAR

Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KHG/KDPG aldolase family [H]

Homologues:

Organism=Escherichia coli, GI1788156, Length=187, Percent_Identity=43.3155080213904, Blast_Score=170, Evalue=8e-44,

Paralogues:

None

Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.3.16; =4.1.2.14 [H]

Molecular weight: Translated: 21818; Mature: 21818

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00159 ALDOLASE_KDPG_KHG_1 ; PS00160 ALDOLASE_KDPG_KHG_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIHDIVKLGPVIPVLAFETVEQGEHVSRALHAGGVKVLEITLRTEAGLKAIERASQLA
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHH
DDIVVGVGTITKPEHCALAKQAGAQFGVSPGLTRDMHRAASDAGLPLLPGVMTPTDIITA
HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LELGYEVVKFFPAQQAGGIPMLQAFHGPFPTLKFCPTGGISAQTAPDFLKQPNVVCVGGS
HHHHHHHHHHHCCHHCCCCHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCEEEECCC
WLTPKAALAAQDWAEVTRLAQAASQLAR
CCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTIHDIVKLGPVIPVLAFETVEQGEHVSRALHAGGVKVLEITLRTEAGLKAIERASQLA
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHH
DDIVVGVGTITKPEHCALAKQAGAQFGVSPGLTRDMHRAASDAGLPLLPGVMTPTDIITA
HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LELGYEVVKFFPAQQAGGIPMLQAFHGPFPTLKFCPTGGISAQTAPDFLKQPNVVCVGGS
HHHHHHHHHHHCCHHCCCCHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCEEEECCC
WLTPKAALAAQDWAEVTRLAQAASQLAR
CCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8145647 [H]