| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is eda [H]
Identifier: 238026222
GI number: 238026222
Start: 583905
End: 584531
Strand: Direct
Name: eda [H]
Synonym: bglu_1g05530
Alternate gene names: 238026222
Gene position: 583905-584531 (Clockwise)
Preceding gene: 238026221
Following gene: 238026223
Centisome position: 14.95
GC content: 70.81
Gene sequence:
>627_bases ATGAAGACGATCCACGACATCGTGAAACTCGGCCCGGTGATTCCGGTGCTCGCGTTCGAGACGGTCGAGCAGGGCGAGCA CGTGTCGCGCGCGCTGCACGCGGGCGGCGTGAAGGTGCTGGAGATCACGCTGCGCACCGAGGCCGGACTGAAGGCGATCG AACGCGCGAGCCAGCTCGCCGACGACATCGTGGTCGGTGTCGGCACCATCACGAAGCCCGAGCACTGCGCGCTCGCCAAG CAGGCCGGCGCGCAGTTCGGCGTGTCGCCGGGCCTCACCAGGGACATGCACCGGGCCGCGAGCGACGCGGGCCTGCCGCT GCTGCCCGGCGTGATGACGCCGACCGACATCATCACCGCGCTCGAGCTCGGCTATGAGGTGGTGAAGTTCTTCCCGGCGC AGCAGGCGGGCGGCATCCCGATGCTGCAGGCGTTCCACGGCCCGTTCCCGACGCTGAAGTTCTGCCCGACCGGCGGCATC AGTGCGCAGACGGCGCCCGATTTCCTCAAGCAGCCGAACGTGGTCTGCGTGGGCGGCTCGTGGCTGACGCCCAAGGCCGC GCTCGCGGCCCAGGACTGGGCCGAGGTCACGCGGCTCGCCCAGGCGGCGAGCCAGCTGGCCCGCTGA
Upstream 100 bases:
>100_bases ACGCACTGAGCCGCATGGCATGGAACCGAATCGGGCCGGTCGCGCCACGGCGAATCCGCCGCGGCCCGGCCCACGCATCG AATCATAGGAGAAGCAGCAG
Downstream 100 bases:
>100_bases TCCGCCCCGCCGGGCGGCCCGCTCGGCCGAATCGGCTCGAATCGTCGCCGGGCCGGCCGGCGGGAGCGATGGTTGCGTGC GCATCCGCCGGCGCGTGTCC
Product: 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase; 2-keto-4-hydroxyglutarate aldolase; KHG-aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MKTIHDIVKLGPVIPVLAFETVEQGEHVSRALHAGGVKVLEITLRTEAGLKAIERASQLADDIVVGVGTITKPEHCALAK QAGAQFGVSPGLTRDMHRAASDAGLPLLPGVMTPTDIITALELGYEVVKFFPAQQAGGIPMLQAFHGPFPTLKFCPTGGI SAQTAPDFLKQPNVVCVGGSWLTPKAALAAQDWAEVTRLAQAASQLAR
Sequences:
>Translated_208_residues MKTIHDIVKLGPVIPVLAFETVEQGEHVSRALHAGGVKVLEITLRTEAGLKAIERASQLADDIVVGVGTITKPEHCALAK QAGAQFGVSPGLTRDMHRAASDAGLPLLPGVMTPTDIITALELGYEVVKFFPAQQAGGIPMLQAFHGPFPTLKFCPTGGI SAQTAPDFLKQPNVVCVGGSWLTPKAALAAQDWAEVTRLAQAASQLAR >Mature_208_residues MKTIHDIVKLGPVIPVLAFETVEQGEHVSRALHAGGVKVLEITLRTEAGLKAIERASQLADDIVVGVGTITKPEHCALAK QAGAQFGVSPGLTRDMHRAASDAGLPLLPGVMTPTDIITALELGYEVVKFFPAQQAGGIPMLQAFHGPFPTLKFCPTGGI SAQTAPDFLKQPNVVCVGGSWLTPKAALAAQDWAEVTRLAQAASQLAR
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1788156, Length=187, Percent_Identity=43.3155080213904, Blast_Score=170, Evalue=8e-44,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.3.16; =4.1.2.14 [H]
Molecular weight: Translated: 21818; Mature: 21818
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00159 ALDOLASE_KDPG_KHG_1 ; PS00160 ALDOLASE_KDPG_KHG_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIHDIVKLGPVIPVLAFETVEQGEHVSRALHAGGVKVLEITLRTEAGLKAIERASQLA CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHH DDIVVGVGTITKPEHCALAKQAGAQFGVSPGLTRDMHRAASDAGLPLLPGVMTPTDIITA HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH LELGYEVVKFFPAQQAGGIPMLQAFHGPFPTLKFCPTGGISAQTAPDFLKQPNVVCVGGS HHHHHHHHHHHCCHHCCCCHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCEEEECCC WLTPKAALAAQDWAEVTRLAQAASQLAR CCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTIHDIVKLGPVIPVLAFETVEQGEHVSRALHAGGVKVLEITLRTEAGLKAIERASQLA CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHH DDIVVGVGTITKPEHCALAKQAGAQFGVSPGLTRDMHRAASDAGLPLLPGVMTPTDIITA HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH LELGYEVVKFFPAQQAGGIPMLQAFHGPFPTLKFCPTGGISAQTAPDFLKQPNVVCVGGS HHHHHHHHHHHCCHHCCCCHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCEEEECCC WLTPKAALAAQDWAEVTRLAQAASQLAR CCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8145647 [H]