| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is glk [H]
Identifier: 238026220
GI number: 238026220
Start: 580762
End: 581658
Strand: Reverse
Name: glk [H]
Synonym: bglu_1g05510
Alternate gene names: 238026220
Gene position: 581658-580762 (Counterclockwise)
Preceding gene: 238026225
Following gene: 238026210
Centisome position: 14.89
GC content: 71.24
Gene sequence:
>897_bases ATGCTGCCCCGAATCGAAGCGCTGCGCGCGCAGCTACGCCCTTCCGAGCGCAAGCTCGCCGACTACATGCTGGCCGCGCC GCGCGAGATCCTCGACCTGTCGATGACCGAGCTCGCCGCGCGCGCGGGCGTGAGCCAGCCCACCATCGCGCGGTTCTGCC ATGCGCTCGGCTGCAGCGGCTTTCGCGAGTTCAAGATCCGGCTCGCGCAGAGCGTGGCGCCGGGCGTGCCGTCGGTCTAT CGCGACGTGGAACCCGACGAGCCCGCGCCCGGCATCATCGGCAAGGTGTTCGACCGCACCATCGGCGCGCTGATCGAGGT GCGCAACAGCCTGTCGGCCGGCAGCGTGGCGGAGGCCATCGCGCTGCTCGCGCGCGCCTCGCGCATCGAGTTCTACGGCG CGGGCGGCTCCGGCATCGCCGCGCAGGACGTCCAGCACAAGTTCTTCCGGCTCGGCATGCCGAGCGTGGCCTATTCCGAC CCGCACACCTTCAGCATGTCGGCCGCGCTGCTAGGCGCGCAGGACGTGGTGGTGGCGATTTCGAACACGGGGCGCACGCG CGACATCGTCGAGGCCGCGAAATCGGCGCTCGCCTGCGGCGCGAAAGTGGTGTCGATCACGCACAGCCACTCGCCGCTGG CGCAGCTGGCCAGCGTCAATCTCGCCTCGAACATTGCCGAGGAAACCGACGTGTTCTCGCCGATGACCTCGCGCATGTCG CATCTGGCGATCGGCGACATCCTCGCGGTGGGCGTCGCGCTGCAGCGCGGGCCGGCGCTCGTGGACCGGCTCGGCCGCGC GAAGGCGGCCATCACGCGGCGCCGCATCGAGCCCGACGGCAAGCCGGCCGAGCGCCGGGGCGCGCGCGACGGGAAGGAAA CCGAAACGCAGGCCTGA
Upstream 100 bases:
>100_bases GTCGTGCCACGACGTCGACACTTCAGCTAGAAATTTCCTGTAGTTTTTCTACAATACCGCCACACGCCTACAATCCGTCA TTTGCGAAAACGAGCCGCCG
Downstream 100 bases:
>100_bases GCGGCCCGCGCCGCCTGAGGACGCCGCCGGGCGGCGGCGATGATGCCGCCCAGCGACGATGGCGCGGCCGCTATCGCCGA GCGCGCGCGGCGGCGCGAAG
Product: RpiR family transcriptional regulator
Products: NA
Alternate protein names: Glucokinase; Glucose kinase; Putative HTH-type transcriptional regulator [H]
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MLPRIEALRAQLRPSERKLADYMLAAPREILDLSMTELAARAGVSQPTIARFCHALGCSGFREFKIRLAQSVAPGVPSVY RDVEPDEPAPGIIGKVFDRTIGALIEVRNSLSAGSVAEAIALLARASRIEFYGAGGSGIAAQDVQHKFFRLGMPSVAYSD PHTFSMSAALLGAQDVVVAISNTGRTRDIVEAAKSALACGAKVVSITHSHSPLAQLASVNLASNIAEETDVFSPMTSRMS HLAIGDILAVGVALQRGPALVDRLGRAKAAITRRRIEPDGKPAERRGARDGKETETQA
Sequences:
>Translated_298_residues MLPRIEALRAQLRPSERKLADYMLAAPREILDLSMTELAARAGVSQPTIARFCHALGCSGFREFKIRLAQSVAPGVPSVY RDVEPDEPAPGIIGKVFDRTIGALIEVRNSLSAGSVAEAIALLARASRIEFYGAGGSGIAAQDVQHKFFRLGMPSVAYSD PHTFSMSAALLGAQDVVVAISNTGRTRDIVEAAKSALACGAKVVSITHSHSPLAQLASVNLASNIAEETDVFSPMTSRMS HLAIGDILAVGVALQRGPALVDRLGRAKAAITRRRIEPDGKPAERRGARDGKETETQA >Mature_298_residues MLPRIEALRAQLRPSERKLADYMLAAPREILDLSMTELAARAGVSQPTIARFCHALGCSGFREFKIRLAQSVAPGVPSVY RDVEPDEPAPGIIGKVFDRTIGALIEVRNSLSAGSVAEAIALLARASRIEFYGAGGSGIAAQDVQHKFFRLGMPSVAYSD PHTFSMSAALLGAQDVVVAISNTGRTRDIVEAAKSALACGAKVVSITHSHSPLAQLASVNLASNIAEETDVFSPMTSRMS HLAIGDILAVGVALQRGPALVDRLGRAKAAITRRRIEPDGKPAERRGARDGKETETQA
Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788159, Length=278, Percent_Identity=39.2086330935252, Blast_Score=209, Evalue=2e-55, Organism=Escherichia coli, GI87082369, Length=271, Percent_Identity=29.520295202952, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI87082130, Length=233, Percent_Identity=33.4763948497854, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1788767, Length=281, Percent_Identity=26.3345195729537, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003836 - InterPro: IPR000843 - InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF02685 Glucokinase; PF01418 HTH_6; PF01380 SIS [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 31604; Mature: 31604
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS00356 HTH_LACI_1 ; PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPRIEALRAQLRPSERKLADYMLAAPREILDLSMTELAARAGVSQPTIARFCHALGCSG CCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC FREFKIRLAQSVAPGVPSVYRDVEPDEPAPGIIGKVFDRTIGALIEVRNSLSAGSVAEAI HHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ALLARASRIEFYGAGGSGIAAQDVQHKFFRLGMPSVAYSDPHTFSMSAALLGAQDVVVAI HHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEE SNTGRTRDIVEAAKSALACGAKVVSITHSHSPLAQLASVNLASNIAEETDVFSPMTSRMS CCCCCHHHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLAIGDILAVGVALQRGPALVDRLGRAKAAITRRRIEPDGKPAERRGARDGKETETQA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure MLPRIEALRAQLRPSERKLADYMLAAPREILDLSMTELAARAGVSQPTIARFCHALGCSG CCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC FREFKIRLAQSVAPGVPSVYRDVEPDEPAPGIIGKVFDRTIGALIEVRNSLSAGSVAEAI HHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ALLARASRIEFYGAGGSGIAAQDVQHKFFRLGMPSVAYSDPHTFSMSAALLGAQDVVVAI HHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEE SNTGRTRDIVEAAKSALACGAKVVSITHSHSPLAQLASVNLASNIAEETDVFSPMTSRMS CCCCCHHHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLAIGDILAVGVALQRGPALVDRLGRAKAAITRRRIEPDGKPAERRGARDGKETETQA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA