| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is leuS [H]
Identifier: 238026215
GI number: 238026215
Start: 574401
End: 576995
Strand: Direct
Name: leuS [H]
Synonym: bglu_1g05460
Alternate gene names: 238026215
Gene position: 574401-576995 (Clockwise)
Preceding gene: 238026214
Following gene: 238026216
Centisome position: 14.7
GC content: 67.01
Gene sequence:
>2595_bases ATGCAAGAACGATACGTACCCGCCGACGTCGAAGCCGCCGCCCAGCGCGACTGGCGCGATGCCGATGCCTACCTGACGAA GGAAGATTCGCAAAAGCCGAAGTTCTATTGCGTATCGATGCTGCCGTATCCGTCCGGCAAGCTGCACATGGGTCACGTGC GCAACTACACGATCAACGACGTGATGTACCGCTATCTGCGGATGAACGGCTACAACACGCTGATGCCGATGGGTTGGGAC GCGTTCGGGATGCCGGCCGAGAACGCCGCGATGGCCAACGGCGTGCCGCCCGCGAAGTGGACCTACGACAACATCGCCTA CATGAAGAGGCAGATGCAGGCGATGGGTCTCGCGATCGACTGGTCGCGCGAGATCGCCACCTGCAATCCGGACTACTACA AGTGGAACCAGTGGCTGTTCCTGAAGATGCTGGAAAAGGGCATCGCCTACAAGAAGACGGGCACCGTGAACTGGGACCCG GTCGACCAGACCGTACTGGCCAACGAGCAGGTGATCGACGGGCGTGGCTGGCGCTCGGGCGCCGTGGTCGAGAAGCGCGA GATCCCGATGTACTACCTGCGCATCACGCAGTATGCCGACGAGCTGCTCGACGACCTCGAGGGCCTCGGCTGGCCCGAGC GCGTCAAGGTCATGCAGCAGAACTGGATCGGCAAGAGCTTCGGCGTGAACTTCGGCTTCCCCTATGAACTCGACGGCGAG CAGAAGCTGCTGCGCGTGTTCACGACGCGCGCCGACACCATCATGGGCGTGACGTTCTGCGCGGTCGCGGCCGAGCATCC GCTCGCCACGCGGCTCGCCGAAGGCCGGCCCGAACTGCTCGCGTTCATCGACGAATGCAAGCAGGGCGGCGTGGCCGAGG CCGACATGGCGACCATGGAGAAGAAGGGCATGGCCACGGGCTTCTCGGTCAAGCACCCGCTGACGGGCGAGCCCGTGCCG GTGTGGATCGGCAACTACGTGCTGATGAGCTATGGCGAAGGCGCCGTGATGGGCGTGCCGGCCCACGACGAGCGCGATTT CGCGTTCGCCGCCAAGTACGGCCTGCCGATCAAGCAGGTGATCGCGGCCGAGGGCGAGACCTATTCCACCGACGCGTGGC AGGAGTGGTACGGCGACAAGACGAAGGGCGTCTGCGTCAACAGCGGCAAGTACGACGGCCTCGGCCACGAGGCCGCGGTC GACGCGGTCGCGGCCGACCTGGCCGCGGGCGGCTTCGGCGACAAGCAGGTCACCTGGCGCCTGCGCGACTGGGGCGTGTC GCGCCAGCGCTACTGGGGCACGCCGATCCCGATCATCCATTGCCCGTCGTGCGGCGACGTGCCGGTGCCCGAGGCGGATC TGCCGGTGGTGCTGCCCGAGGATCTCGTGCCGGACGGCTCGGGCAATCCGCTGGCCAAGTCCGAGGCGTTCGTGAACTGC ACCTGTCCGAAGTGCGGCGCCGCTGCGAAGCGCGAAACCGACACGATGGACACCTTCGTCGATTCGTCGTGGTATTTCTC GCGCTACACCGCGCCCGACGCCGCCACCATGGTGGCGGCGCGCACCGACCACTGGATGCCGATGGACCAGTACATCGGCG GCATCGAGCACGCGATCCTGCACCTGCTCTATTCGCGTTTCTGGACCAAGGTGATGCGCGACCTCGGCCTCGTGAAGTTC GGCGAGCCGGCCAAGAACCTGCTCACCCAGGGCATGGTGCTCAACGAGACGTTCTACCGCGAGGACGCGACCGGCAAGAA GACCTGGTTCAACCCGGCCGACGTGACCGTCACGCACGACGACAAGGGCCGCCCGGTCGGCGCCGTGCACAATGCCGACG GCCAGCCGGTGGTGCTGGGCGGTATCGAGAAGATGTCGAAGTCGAAGAACAACGGCGTCGATCCGCAGGTGTTGATCGAC CAGCACGGCGCCGACACGGCGCGCCTGTTCACGATGTTCGCCGCGCCGCCCGAGCAGCAGCTCGAATGGTCCGGCGCCGG CGTCGAGGGCGCGAGCCGCTTCCTGCGCCGGGTCTGGGCGTTCGGCGCGGCGCACCGCGAGGCGCTCGCCGTGCGCGCCG GGTTCGACGCCGCCCAGCTCGACGAGGGTGCCAGGGCGCTGCGCCGCGAGATCCACGGCGTGCTGCGCCAGGCCGATTTC GACTACCAGCGGCTGCAGTACAACACCGTCGTGTCGGCCGCGATGAAGATGCTCAACGCGATCGAGGCGGCCAAGGCCGC GCCGGCCGGCGTGCTGCGCGAGACCTACGGGATCCTGCTGCGCGTGCTGTATCCGGTGGTGCCGCACATCACCTTCGCGC TCTGGCAGGCGCTCGGCTACGCCGATGAATTCGGCACGCTGCTCGACGCGCCCTGGCCGAAGGTCGACGAGGCCGCGCTC GAACAGGCCGAGATCGAACTCGTGCTGCAGATCAACGGCAAGGTGCGCGGCGCGATCAAGGTGGCGAAGGACGCGGGCCG CGACGTGATCGAGGCCGCGGCGCTCGCCGACGAGAGTTTCGCGAAGTTCGGCGAGGGCAAGCCGGCGAAGAAGGTGATCG TCGTGCCGGGCCGTCTCGTCAATGTCGTGGTCTGA
Upstream 100 bases:
>100_bases GTATAATCGACCCTTTCCCCGCGATCCGGGGAGTGCGACCTTCGATCCACTCCAGCCCGCGCGCGCCGCGCCGGTGCCGA CAGCCTAGCCGAACCACACC
Downstream 100 bases:
>100_bases CGCGCAGTAGAACCAGCAAGGAGCCAAGGTGATCCGCAGATCGTTCGTAATGGTGATGGGCAGCGCGCTGCTGCTGTCCG CATGCGGTTTTCAGTTGCGC
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 864; Mature: 864
Protein sequence:
>864_residues MQERYVPADVEAAAQRDWRDADAYLTKEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWD AFGMPAENAAMANGVPPAKWTYDNIAYMKRQMQAMGLAIDWSREIATCNPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDP VDQTVLANEQVIDGRGWRSGAVVEKREIPMYYLRITQYADELLDDLEGLGWPERVKVMQQNWIGKSFGVNFGFPYELDGE QKLLRVFTTRADTIMGVTFCAVAAEHPLATRLAEGRPELLAFIDECKQGGVAEADMATMEKKGMATGFSVKHPLTGEPVP VWIGNYVLMSYGEGAVMGVPAHDERDFAFAAKYGLPIKQVIAAEGETYSTDAWQEWYGDKTKGVCVNSGKYDGLGHEAAV DAVAADLAAGGFGDKQVTWRLRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEADLPVVLPEDLVPDGSGNPLAKSEAFVNC TCPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAATMVAARTDHWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKF GEPAKNLLTQGMVLNETFYREDATGKKTWFNPADVTVTHDDKGRPVGAVHNADGQPVVLGGIEKMSKSKNNGVDPQVLID QHGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWAFGAAHREALAVRAGFDAAQLDEGARALRREIHGVLRQADF DYQRLQYNTVVSAAMKMLNAIEAAKAAPAGVLRETYGILLRVLYPVVPHITFALWQALGYADEFGTLLDAPWPKVDEAAL EQAEIELVLQINGKVRGAIKVAKDAGRDVIEAAALADESFAKFGEGKPAKKVIVVPGRLVNVVV
Sequences:
>Translated_864_residues MQERYVPADVEAAAQRDWRDADAYLTKEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWD AFGMPAENAAMANGVPPAKWTYDNIAYMKRQMQAMGLAIDWSREIATCNPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDP VDQTVLANEQVIDGRGWRSGAVVEKREIPMYYLRITQYADELLDDLEGLGWPERVKVMQQNWIGKSFGVNFGFPYELDGE QKLLRVFTTRADTIMGVTFCAVAAEHPLATRLAEGRPELLAFIDECKQGGVAEADMATMEKKGMATGFSVKHPLTGEPVP VWIGNYVLMSYGEGAVMGVPAHDERDFAFAAKYGLPIKQVIAAEGETYSTDAWQEWYGDKTKGVCVNSGKYDGLGHEAAV DAVAADLAAGGFGDKQVTWRLRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEADLPVVLPEDLVPDGSGNPLAKSEAFVNC TCPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAATMVAARTDHWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKF GEPAKNLLTQGMVLNETFYREDATGKKTWFNPADVTVTHDDKGRPVGAVHNADGQPVVLGGIEKMSKSKNNGVDPQVLID QHGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWAFGAAHREALAVRAGFDAAQLDEGARALRREIHGVLRQADF DYQRLQYNTVVSAAMKMLNAIEAAKAAPAGVLRETYGILLRVLYPVVPHITFALWQALGYADEFGTLLDAPWPKVDEAAL EQAEIELVLQINGKVRGAIKVAKDAGRDVIEAAALADESFAKFGEGKPAKKVIVVPGRLVNVVV >Mature_864_residues MQERYVPADVEAAAQRDWRDADAYLTKEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWD AFGMPAENAAMANGVPPAKWTYDNIAYMKRQMQAMGLAIDWSREIATCNPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDP VDQTVLANEQVIDGRGWRSGAVVEKREIPMYYLRITQYADELLDDLEGLGWPERVKVMQQNWIGKSFGVNFGFPYELDGE QKLLRVFTTRADTIMGVTFCAVAAEHPLATRLAEGRPELLAFIDECKQGGVAEADMATMEKKGMATGFSVKHPLTGEPVP VWIGNYVLMSYGEGAVMGVPAHDERDFAFAAKYGLPIKQVIAAEGETYSTDAWQEWYGDKTKGVCVNSGKYDGLGHEAAV DAVAADLAAGGFGDKQVTWRLRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEADLPVVLPEDLVPDGSGNPLAKSEAFVNC TCPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAATMVAARTDHWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKF GEPAKNLLTQGMVLNETFYREDATGKKTWFNPADVTVTHDDKGRPVGAVHNADGQPVVLGGIEKMSKSKNNGVDPQVLID QHGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWAFGAAHREALAVRAGFDAAQLDEGARALRREIHGVLRQADF DYQRLQYNTVVSAAMKMLNAIEAAKAAPAGVLRETYGILLRVLYPVVPHITFALWQALGYADEFGTLLDAPWPKVDEAAL EQAEIELVLQINGKVRGAIKVAKDAGRDVIEAAALADESFAKFGEGKPAKKVIVVPGRLVNVVV
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=885, Percent_Identity=36.6101694915254, Blast_Score=536, Evalue=1e-152, Organism=Escherichia coli, GI1786861, Length=876, Percent_Identity=51.1415525114155, Blast_Score=878, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=387, Percent_Identity=23.7726098191214, Blast_Score=91, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71997517, Length=255, Percent_Identity=42.3529411764706, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71997510, Length=255, Percent_Identity=42.3529411764706, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI212645227, Length=343, Percent_Identity=29.4460641399417, Blast_Score=141, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323414, Length=829, Percent_Identity=40.1688781664656, Blast_Score=566, Evalue=1e-162, Organism=Saccharomyces cerevisiae, GI6321531, Length=401, Percent_Identity=24.1895261845387, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI21355409, Length=861, Percent_Identity=35.4239256678281, Blast_Score=451, Evalue=1e-126, Organism=Drosophila melanogaster, GI281366294, Length=363, Percent_Identity=21.763085399449, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 95700; Mature: 95700
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQERYVPADVEAAAQRDWRDADAYLTKEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTIND CCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHH VMYRYLRMNGYNTLMPMGWDAFGMPAENAAMANGVPPAKWTYDNIAYMKRQMQAMGLAID HHHHHHHHCCCCEECCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEE WSREIATCNPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDPVDQTVLANEQVIDGRGWRSG CCCCEECCCCCCEEHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCEEECCCCCCCC AVVEKREIPMYYLRITQYADELLDDLEGLGWPERVKVMQQNWIGKSFGVNFGFPYELDGE CEEECCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCH QKLLRVFTTRADTIMGVTFCAVAAEHPLATRLAEGRPELLAFIDECKQGGVAEADMATME HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHH KKGMATGFSVKHPLTGEPVPVWIGNYVLMSYGEGAVMGVPAHDERDFAFAAKYGLPIKQV HCCCCCCCEECCCCCCCCCEEEECCEEEEECCCCCEEECCCCCCCCEEEEECCCCCHHHH IAAEGETYSTDAWQEWYGDKTKGVCVNSGKYDGLGHEAAVDAVAADLAAGGFGDKQVTWR HHCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE LRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEADLPVVLPEDLVPDGSGNPLAKSEAFVNC EHHCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEECCHHCCCCCCCCCCCCCCCEEEE TCPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAATMVAARTDHWMPMDQYIGGIEHAIL CCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCHHHEEEECCCCCCCHHHHHHHHHHHHH HLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVLNETFYREDATGKKTWFNPADVTVTHD HHHHHHHHHHHHHHCCCEECCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEC DKGRPVGAVHNADGQPVVLGGIEKMSKSKNNGVDPQVLIDQHGADTARLFTMFAAPPEQQ CCCCCCCEEECCCCCEEEEECHHHHHCCCCCCCCCEEEEECCCCCHHHHHEEECCCCHHH LEWSGAGVEGASRFLRRVWAFGAAHREALAVRAGFDAAQLDEGARALRREIHGVLRQADF CEECCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC DYQRLQYNTVVSAAMKMLNAIEAAKAAPAGVLRETYGILLRVLYPVVPHITFALWQALGY CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADEFGTLLDAPWPKVDEAALEQAEIELVLQINGKVRGAIKVAKDAGRDVIEAAALADESF HHHHHHHHCCCCCCCCHHHHHHCCEEEEEEECCCEEEEEEEHHHCCHHHHHHHHHHHHHH AKFGEGKPAKKVIVVPGRLVNVVV HHHCCCCCCCEEEEECCCEEEEEC >Mature Secondary Structure MQERYVPADVEAAAQRDWRDADAYLTKEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTIND CCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHH VMYRYLRMNGYNTLMPMGWDAFGMPAENAAMANGVPPAKWTYDNIAYMKRQMQAMGLAID HHHHHHHHCCCCEECCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEE WSREIATCNPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDPVDQTVLANEQVIDGRGWRSG CCCCEECCCCCCEEHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCEEECCCCCCCC AVVEKREIPMYYLRITQYADELLDDLEGLGWPERVKVMQQNWIGKSFGVNFGFPYELDGE CEEECCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCH QKLLRVFTTRADTIMGVTFCAVAAEHPLATRLAEGRPELLAFIDECKQGGVAEADMATME HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHH KKGMATGFSVKHPLTGEPVPVWIGNYVLMSYGEGAVMGVPAHDERDFAFAAKYGLPIKQV HCCCCCCCEECCCCCCCCCEEEECCEEEEECCCCCEEECCCCCCCCEEEEECCCCCHHHH IAAEGETYSTDAWQEWYGDKTKGVCVNSGKYDGLGHEAAVDAVAADLAAGGFGDKQVTWR HHCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE LRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEADLPVVLPEDLVPDGSGNPLAKSEAFVNC EHHCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEECCHHCCCCCCCCCCCCCCCEEEE TCPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAATMVAARTDHWMPMDQYIGGIEHAIL CCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCHHHEEEECCCCCCCHHHHHHHHHHHHH HLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVLNETFYREDATGKKTWFNPADVTVTHD HHHHHHHHHHHHHHCCCEECCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEC DKGRPVGAVHNADGQPVVLGGIEKMSKSKNNGVDPQVLIDQHGADTARLFTMFAAPPEQQ CCCCCCCEEECCCCCEEEEECHHHHHCCCCCCCCCEEEEECCCCCHHHHHEEECCCCHHH LEWSGAGVEGASRFLRRVWAFGAAHREALAVRAGFDAAQLDEGARALRREIHGVLRQADF CEECCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC DYQRLQYNTVVSAAMKMLNAIEAAKAAPAGVLRETYGILLRVLYPVVPHITFALWQALGY CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADEFGTLLDAPWPKVDEAALEQAEIELVLQINGKVRGAIKVAKDAGRDVIEAAALADESF HHHHHHHHCCCCCCCCHHHHHHCCEEEEEEECCCEEEEEEEHHHCCHHHHHHHHHHHHHH AKFGEGKPAKKVIVVPGRLVNVVV HHHCCCCCCCEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA