| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is fur [H]
Identifier: 238026210
GI number: 238026210
Start: 570581
End: 571009
Strand: Reverse
Name: fur [H]
Synonym: bglu_1g05410
Alternate gene names: 238026210
Gene position: 571009-570581 (Counterclockwise)
Preceding gene: 238026220
Following gene: 238026206
Centisome position: 14.62
GC content: 61.54
Gene sequence:
>429_bases ATGACCAATCCGACCGAGCTGAAGAATATCGGGCTCAAGGCCACCCTACCTCGCCTCAAGATTCTGGAAATCTTCCAGCA AAGCGAAGTCCGGCACCTGACGGCCGAAGACGTCTATCGCAATCTGCTGCACGAGCAACTCGACATCGGACTGGCCACGG TCTATCGCGTGCTGACGCAGTTCGAGCAGGCGGGCCTGCTCACGCGCAGCAACTTCGAATCGGGCAAGGCCGTGTTCGAG CTCAACGAAGGCTCGCACCACGATCACCTGGTCTGCCTCGACTGCGGCCGCGTCGAGGAATTCTTCGACGCCGAGATCGA GAACCGCCAGCAGGCGATCGCGAAGACGCGCGGCTTCAAGCTGCAGGAGCATTCGCTCGCGATGTACGGCTCGTGCACCA CCGAGGACTGCCCGCACCGCAAGCACTGA
Upstream 100 bases:
>100_bases GAACCGTCGGACAGGCCGCACGACTCGGCTCACTGATGACTGACAGGGCGAAAAGCCGGTACTATTGGAACCCTGCATTG TACTCTAGGGACGCCTAGCC
Downstream 100 bases:
>100_bases CGGCTGCCTGCACGGCACGGCCGCGCAGCGATTCGGCCCGGCGGGCGCCAGCCCGGCCGGGCCGAATCGTTTTCGGGCGC GCCGCCGCCGAATCGCACGG
Product: Fur family ferric uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTNPTELKNIGLKATLPRLKILEIFQQSEVRHLTAEDVYRNLLHEQLDIGLATVYRVLTQFEQAGLLTRSNFESGKAVFE LNEGSHHDHLVCLDCGRVEEFFDAEIENRQQAIAKTRGFKLQEHSLAMYGSCTTEDCPHRKH
Sequences:
>Translated_142_residues MTNPTELKNIGLKATLPRLKILEIFQQSEVRHLTAEDVYRNLLHEQLDIGLATVYRVLTQFEQAGLLTRSNFESGKAVFE LNEGSHHDHLVCLDCGRVEEFFDAEIENRQQAIAKTRGFKLQEHSLAMYGSCTTEDCPHRKH >Mature_141_residues TNPTELKNIGLKATLPRLKILEIFQQSEVRHLTAEDVYRNLLHEQLDIGLATVYRVLTQFEQAGLLTRSNFESGKAVFEL NEGSHHDHLVCLDCGRVEEFFDAEIENRQQAIAKTRGFKLQEHSLAMYGSCTTEDCPHRKH
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulator for biosynthesis of the siderophore alcaligin E [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=140, Percent_Identity=56.4285714285714, Blast_Score=166, Evalue=6e-43,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16281; Mature: 16149
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPTELKNIGLKATLPRLKILEIFQQSEVRHLTAEDVYRNLLHEQLDIGLATVYRVLTQ CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH FEQAGLLTRSNFESGKAVFELNEGSHHDHLVCLDCGRVEEFFDAEIENRQQAIAKTRGFK HHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC LQEHSLAMYGSCTTEDCPHRKH CCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure TNPTELKNIGLKATLPRLKILEIFQQSEVRHLTAEDVYRNLLHEQLDIGLATVYRVLTQ CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH FEQAGLLTRSNFESGKAVFELNEGSHHDHLVCLDCGRVEEFFDAEIENRQQAIAKTRGFK HHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC LQEHSLAMYGSCTTEDCPHRKH CCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA