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The map label for this gene is exuR [H]

Identifier: 238026206

GI number: 238026206

Start: 566476

End: 567168

Strand: Reverse

Name: exuR [H]

Synonym: bglu_1g05370

Alternate gene names: 238026206

Gene position: 567168-566476 (Counterclockwise)

Preceding gene: 238026210

Following gene: 238026203

Centisome position: 14.52

GC content: 68.25

Gene sequence:

>693_bases
ATGAAGAACCTTCCCCACACCGTCACCGACGCGGCCATCGCCACGATCCAGGCTCGGATCGAAACCGGCGTCTACCCCGT
CGGCAGCCTGTTGCCCGCCCAACGCCAGTTGTCGGAAGAACTCGATATCAGCCGCGCCTCGCTGCGCGAGGCGCTCTCGA
CGCTCGAGGCGCTCGGCATGCTGACGATCCGGCCCGGCAAGGGCGTCTACGTCGAGCGCGCGCAGGCGGGCGCCGATCAT
CCGTGGCGCTTCGCCGAACGCTCGTCACCGCCCGACACCTACCAGATGCGCTACGCACTGGAAGGCTTCACCGCGCGCAT
GGCCGCGCTCGCCGTCAGCGACGTCGATCTGGCCTGGTTCGAGGAGAATCTGGCCGCGCTGCACGTGGCGCTCGTCGACA
ACGCGCTGGACGACGCGTCGCAGCTCGATTTCGAGTTCCACATGCGTATCGTCGGGCTGGCCGGCAATGCGGCGATCGAG
TCGATCCTGCGCAACAGCGCGGACATCATGAAGGAAAGCCAGCGCATGCCGTTCTACCGGCGCGAGCTGATGCTCTCGAC
GTTCCACGAGCACCGCGTGATTCTCGACGCGCTGATCGCACGCGACCCGGCTGCCGCGGGCCGCGCGATCGAGACGCATA
TCCGGGGCGCGGCCCAGCGCGCCGGCGTGTTCTTCCCGACGCCGCCCGGTTGA

Upstream 100 bases:

>100_bases
ATCAAAAACAGGGATTACCCGATTGCCACAGCGGGCCGGGCACTGCCGCTGCGGGGCAGGCCGCCGGATTACAATGCCGG
TCTGACCGCCCCTTGCCGCC

Downstream 100 bases:

>100_bases
GCCTGGCACGGCCGCCGGCAGCATCCACCGCCAGGGCGCCTCGGTCCGCTTGCTTGCGGCTCCGCCATGCCCGGCCCCGA
AAAGACACGGCCCGGCGCCG

Product: GntR-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKNLPHTVTDAAIATIQARIETGVYPVGSLLPAQRQLSEELDISRASLREALSTLEALGMLTIRPGKGVYVERAQAGADH
PWRFAERSSPPDTYQMRYALEGFTARMAALAVSDVDLAWFEENLAALHVALVDNALDDASQLDFEFHMRIVGLAGNAAIE
SILRNSADIMKESQRMPFYRRELMLSTFHEHRVILDALIARDPAAAGRAIETHIRGAAQRAGVFFPTPPG

Sequences:

>Translated_230_residues
MKNLPHTVTDAAIATIQARIETGVYPVGSLLPAQRQLSEELDISRASLREALSTLEALGMLTIRPGKGVYVERAQAGADH
PWRFAERSSPPDTYQMRYALEGFTARMAALAVSDVDLAWFEENLAALHVALVDNALDDASQLDFEFHMRIVGLAGNAAIE
SILRNSADIMKESQRMPFYRRELMLSTFHEHRVILDALIARDPAAAGRAIETHIRGAAQRAGVFFPTPPG
>Mature_230_residues
MKNLPHTVTDAAIATIQARIETGVYPVGSLLPAQRQLSEELDISRASLREALSTLEALGMLTIRPGKGVYVERAQAGADH
PWRFAERSSPPDTYQMRYALEGFTARMAALAVSDVDLAWFEENLAALHVALVDNALDDASQLDFEFHMRIVGLAGNAAIE
SILRNSADIMKESQRMPFYRRELMLSTFHEHRVILDALIARDPAAAGRAIETHIRGAAQRAGVFFPTPPG

Specific function: Repressor for the exu regulon that encode genes involved in hexuronate utilization. It regulates the exuT, uxaCA and uxuRAB operons. Binds D-tagaturonate and D-fructuronate as inducers [H]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082208, Length=214, Percent_Identity=29.9065420560748, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1786303, Length=222, Percent_Identity=29.7297297297297, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790032, Length=223, Percent_Identity=28.6995515695067, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790780, Length=220, Percent_Identity=29.0909090909091, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1789353, Length=235, Percent_Identity=28.0851063829787, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1787821, Length=183, Percent_Identity=25.6830601092896, Blast_Score=60, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25293; Mature: 25293

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLPHTVTDAAIATIQARIETGVYPVGSLLPAQRQLSEELDISRASLREALSTLEALGM
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
LTIRPGKGVYVERAQAGADHPWRFAERSSPPDTYQMRYALEGFTARMAALAVSDVDLAWF
EEECCCCCEEEECCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EENLAALHVALVDNALDDASQLDFEFHMRIVGLAGNAAIESILRNSADIMKESQRMPFYR
HHHHHHHHHHHHHHHHCHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHH
RELMLSTFHEHRVILDALIARDPAAAGRAIETHIRGAAQRAGVFFPTPPG
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKNLPHTVTDAAIATIQARIETGVYPVGSLLPAQRQLSEELDISRASLREALSTLEALGM
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
LTIRPGKGVYVERAQAGADHPWRFAERSSPPDTYQMRYALEGFTARMAALAVSDVDLAWF
EEECCCCCEEEECCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EENLAALHVALVDNALDDASQLDFEFHMRIVGLAGNAAIESILRNSADIMKESQRMPFYR
HHHHHHHHHHHHHHHHCHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHH
RELMLSTFHEHRVILDALIARDPAAAGRAIETHIRGAAQRAGVFFPTPPG
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA