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The map label for this gene is rnaSA [H]

Identifier: 238026199

GI number: 238026199

Start: 559525

End: 559947

Strand: Direct

Name: rnaSA [H]

Synonym: bglu_1g05300

Alternate gene names: 238026199

Gene position: 559525-559947 (Clockwise)

Preceding gene: 238026198

Following gene: 238026200

Centisome position: 14.32

GC content: 64.07

Gene sequence:

>423_bases
ATGGCACGCAAGTGGCTCCGCAACGGCGCGCTCGCGTCTGTTTTCGCGCTCGTCGCACTGGGTAGCGCTGGCTTGCCGGC
AGGCAGTGCGATTTCCCTGGCGTACGCTCGGGAAGCCGTCTCCAGCATGGCGCCCGTCGGCACCATTCCCACTTCCCGGT
TGCCGAGCGAAGCCGTGACGACGCTTGGCCTGATTGCCGCCGGCGGCCCTTATCCGTATCCGAAAGACGGGGCCGTGTTC
GGCAATTTCGAGCGCATTCTGCCGAAGATGCGGCGCGGCTATTACCACGAGTACACGGTGCCGACGCCGCGCGCGCGCAA
TCGCGGCGCGAAGCGCATCGTCTGCGGCGGTCCGCTGCGACGCGTCGACAACTGTTATTACACCGACGACCACTACGCCA
GTTTTAAACGTATTGTTGAATGA

Upstream 100 bases:

>100_bases
TGCATTTGCCTGGCGAACATTGATTCCGTCCGCCATTAGCGCTACGCTTACGCCTTTCCTGGTCGTCAACTTGTTGATTT
AACAGCGGGAACCCCGGTTC

Downstream 100 bases:

>100_bases
CTTCGGGATGATCGGCATGGGCGACACTACCTACGCGCACGAAATGTCGGCTGCGGCGGATCTGTTCGCGGCCGGAGACG
GCAACCTGTTCCAGCGGGTG

Product: guanyl-specific ribonuclease Sa

Products: NA

Alternate protein names: RNase Sa [H]

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MARKWLRNGALASVFALVALGSAGLPAGSAISLAYAREAVSSMAPVGTIPTSRLPSEAVTTLGLIAAGGPYPYPKDGAVF
GNFERILPKMRRGYYHEYTVPTPRARNRGAKRIVCGGPLRRVDNCYYTDDHYASFKRIVE

Sequences:

>Translated_140_residues
MARKWLRNGALASVFALVALGSAGLPAGSAISLAYAREAVSSMAPVGTIPTSRLPSEAVTTLGLIAAGGPYPYPKDGAVF
GNFERILPKMRRGYYHEYTVPTPRARNRGAKRIVCGGPLRRVDNCYYTDDHYASFKRIVE
>Mature_139_residues
ARKWLRNGALASVFALVALGSAGLPAGSAISLAYAREAVSSMAPVGTIPTSRLPSEAVTTLGLIAAGGPYPYPKDGAVFG
NFERILPKMRRGYYHEYTVPTPRARNRGAKRIVCGGPLRRVDNCYYTDDHYASFKRIVE

Specific function: Unknown

COG id: COG4290

COG function: function code F; Guanyl-specific ribonuclease Sa

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonuclease N1/T1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000026
- InterPro:   IPR016191 [H]

Pfam domain/function: PF00545 Ribonuclease [H]

EC number: =3.1.27.3 [H]

Molecular weight: Translated: 15150; Mature: 15018

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKWLRNGALASVFALVALGSAGLPAGSAISLAYAREAVSSMAPVGTIPTSRLPSEAVT
CCCHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
TLGLIAAGGPYPYPKDGAVFGNFERILPKMRRGYYHEYTVPTPRARNRGAKRIVCGGPLR
HHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHH
RVDNCYYTDDHYASFKRIVE
HHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
ARKWLRNGALASVFALVALGSAGLPAGSAISLAYAREAVSSMAPVGTIPTSRLPSEAVT
CCHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
TLGLIAAGGPYPYPKDGAVFGNFERILPKMRRGYYHEYTVPTPRARNRGAKRIVCGGPLR
HHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHH
RVDNCYYTDDHYASFKRIVE
HHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3098582; 3118883; 1654932; 8396032; 9757110; 9819211; 11455593 [H]