| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is maeB [H]
Identifier: 238026198
GI number: 238026198
Start: 556687
End: 558987
Strand: Direct
Name: maeB [H]
Synonym: bglu_1g05290
Alternate gene names: 238026198
Gene position: 556687-558987 (Clockwise)
Preceding gene: 238026194
Following gene: 238026199
Centisome position: 14.25
GC content: 66.75
Gene sequence:
>2301_bases ATGTCCACCAAGTCCTCCCCGAAAGCCGATTTGCGCGCAGCCGCCCTCGATTACCACGAATTCCCGACCCCGGGCAAAAT CGCCGTCCAGCCGACCAAGCAGATGATCAACCAGCGCGATCTCGCGCTGGCGTATTCGCCCGGCGTCGCGTTCGCCTGCG AGGAGATCGTCGAGAATCCGCTCAATGCCGCGCGCTTCACGTCCCGCAGCAACCTGGTCGGCGTCGTCACCAACGGCACC GCGGTGCTGGGCCTCGGCAACATCGGCCCGCTCGCGTCGAAGCCGGTGATGGAGGGCAAGGCCGCGCTGTTCAAGAAGTT CGCCGGCATCGACGTGTTCGACATCGAACTGAACGAATCGGACCCGCACAAGCTGGTGGAGGTGATCGCCGCGCTCGAGC CGACCTTCGGCGGCATCAACCTCGAGGACATCAAGGCACCGGACTGCTTCATCGTCGAGCGCGAATGCCGCAAGCGCATG AAGATCCCGGTATTCCACGACGACCAGCACGGCACCGCGATCGTGGTTGCCGCCGCGGTCACCAACGGCCTCAAGGTGGT GGGCAAGGACATCAAGCAGGTCAAGCTGGTCGCCTCGGGCGCGGGCGCCGCGGCGCTCGCCTGCCTGGACCTGCTGGTCG ACATCGGCCTGCCGCTCGAGAACATCTTCGTCACGGACCTGGCCGGCGTCGTCTACCGGGGCCGCGCCGAGCTGATGGAC CCGGACAAGGAGCGGTTCGCGCGCGAGACCGACGCGCGCACGCTGGCCGAGGTGATCGAGGGCGCCGACATCTTCCTCGG CCTGTCGGCCGCCGGCGTGCTGAAGCAGGAGATGGTCAAGGGCATGGCCGAGCGCCCGCTGATCCTCGCGCTGGCCAACC CGACGCCGGAAATCCTGCCGGAAGTCGCGCACGAGGTGCGCCCCGACGCGATTCTCGCGACCGGCCGCACCGACTATCCG AATCAGGTCAACAACGTCCTCTGCTTCCCGTTCATCTTCCGCGGCGCGCTCGACGTGGGCGCGACCACGATCACGCGCGA GATGGAGATCGCCGCCGTCAACGCGATCGCCGAGCTTGCGCAGCAGGAGCAGAGCGACATCGTCGCCACGGCCTACGCGA TCGAGGATCTCTCGTTCGGGCCGGAATACCTGATCCCGAAGCCGTTCGATCCGCGCCTGATCGTCAAAATCGCGCCGGCC GTCGCGAAGGCCGCGATGGAGGGCGGCGTGGCGACGCGCCCGATCGAGGACATGGACGCCTACGTCCAGCACCTGCAGCA GTTCGTCTATCACAGCGGCAACACCATGAAGCCGGTGTTCCAGGCCGCGCGCAGCGCCCCGCTGGAGAAGAAGCGCGTGG TGTTCGCCGAGGGCGAGGAGGAGCGCGTGCTGCGCGCGGTGCAGATCCTCGTCGACGAGCACGTCGCCAAGCCGATCCTG ATCGGCCGCCCGCACGTGATCGAGAACCGCATCAAGCGCTTCGGCCTGCGCATCGCGCCGGGCGTCGATTTCACGATCGT CAATACCGAGCACGACGAGCGCTATCGCGATTTCTGGCAAACCTATTATCAGCTGATGGTGCGCAAGGGCATGGGCCCGC AGCTCGCCAAGCTCGAAATGCGGCGCCGCACGACGCTGATCGGCGCGATGCTGGTGAAGAAGGGCGAGGCCGACGGCATG ATCTGCGGCACGATCAGCACGACCCACCGCCACCTGCACTTCATCGACCAGGTGATCGGCAAGCGCGAGGGCTGCAGCGT CTACGCCGCGATGAACGGCCTGGTGCTGCCGGGCCGCCAGATCTTCATCGTCGACACGCACGTCAACGTCGATCCAACGC CCGAGCAACTGGCCGAGATCACCATGATGGCGGCCGAGGAAGTGCGCCGCTTCGGCATCGAGCCGAAGGTCGCGCTGCTC TCGCATTCGAACTTCGGCACCAGCAACGCGCCGACCGCGCAGAAGATGCGCGATACGCTCGCGCTGCTCAAGGAGCGCGC GCCGGGTCTCGAGGTGGACGGCGAGATGCACGGCGACGTCGCGCTCGATCCGCTGCTGCGCAAGGAAATCCTGCCGGATT CGACGCTCGAGGGCGAGGCGAACCTGCTGGTGCTGCCGAACATCGATGCCGCCAACATTGCTTACAACCTGCTCAAGACC GCGGCCGGCAACAACATCGCGATCGGCCCGATCCTGCTCGGTGCCGCGCGGCCGGTGCATGTGCTGACCGAATCGGCCAC GGTGCGCCGGATCGTCAACATGGCCGCGCTGCTCGTCGCCGACGTGAACGCGACGCGCTGA
Upstream 100 bases:
>100_bases CATTCCGGCCGCGGCCGTCGCGGCCGGAACGAGAAATCTGGATAAGGATTGGCGCTACAATATGAGCCGAACAGGTATTC TAATCCCGCCCCCTCGACTC
Downstream 100 bases:
>100_bases GCGTGGGCGGCGAGCGCGGCGCCGCCTGCTCTTGCCGCCGGCCCATGTCGTGACGGCTCATGCTGCGTCCGGCGTGGTGC TGGCCTGCCGGACCCGTACC
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 766; Mature: 765
Protein sequence:
>766_residues MSTKSSPKADLRAAALDYHEFPTPGKIAVQPTKQMINQRDLALAYSPGVAFACEEIVENPLNAARFTSRSNLVGVVTNGT AVLGLGNIGPLASKPVMEGKAALFKKFAGIDVFDIELNESDPHKLVEVIAALEPTFGGINLEDIKAPDCFIVERECRKRM KIPVFHDDQHGTAIVVAAAVTNGLKVVGKDIKQVKLVASGAGAAALACLDLLVDIGLPLENIFVTDLAGVVYRGRAELMD PDKERFARETDARTLAEVIEGADIFLGLSAAGVLKQEMVKGMAERPLILALANPTPEILPEVAHEVRPDAILATGRTDYP NQVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIAELAQQEQSDIVATAYAIEDLSFGPEYLIPKPFDPRLIVKIAPA VAKAAMEGGVATRPIEDMDAYVQHLQQFVYHSGNTMKPVFQAARSAPLEKKRVVFAEGEEERVLRAVQILVDEHVAKPIL IGRPHVIENRIKRFGLRIAPGVDFTIVNTEHDERYRDFWQTYYQLMVRKGMGPQLAKLEMRRRTTLIGAMLVKKGEADGM ICGTISTTHRHLHFIDQVIGKREGCSVYAAMNGLVLPGRQIFIVDTHVNVDPTPEQLAEITMMAAEEVRRFGIEPKVALL SHSNFGTSNAPTAQKMRDTLALLKERAPGLEVDGEMHGDVALDPLLRKEILPDSTLEGEANLLVLPNIDAANIAYNLLKT AAGNNIAIGPILLGAARPVHVLTESATVRRIVNMAALLVADVNATR
Sequences:
>Translated_766_residues MSTKSSPKADLRAAALDYHEFPTPGKIAVQPTKQMINQRDLALAYSPGVAFACEEIVENPLNAARFTSRSNLVGVVTNGT AVLGLGNIGPLASKPVMEGKAALFKKFAGIDVFDIELNESDPHKLVEVIAALEPTFGGINLEDIKAPDCFIVERECRKRM KIPVFHDDQHGTAIVVAAAVTNGLKVVGKDIKQVKLVASGAGAAALACLDLLVDIGLPLENIFVTDLAGVVYRGRAELMD PDKERFARETDARTLAEVIEGADIFLGLSAAGVLKQEMVKGMAERPLILALANPTPEILPEVAHEVRPDAILATGRTDYP NQVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIAELAQQEQSDIVATAYAIEDLSFGPEYLIPKPFDPRLIVKIAPA VAKAAMEGGVATRPIEDMDAYVQHLQQFVYHSGNTMKPVFQAARSAPLEKKRVVFAEGEEERVLRAVQILVDEHVAKPIL IGRPHVIENRIKRFGLRIAPGVDFTIVNTEHDERYRDFWQTYYQLMVRKGMGPQLAKLEMRRRTTLIGAMLVKKGEADGM ICGTISTTHRHLHFIDQVIGKREGCSVYAAMNGLVLPGRQIFIVDTHVNVDPTPEQLAEITMMAAEEVRRFGIEPKVALL SHSNFGTSNAPTAQKMRDTLALLKERAPGLEVDGEMHGDVALDPLLRKEILPDSTLEGEANLLVLPNIDAANIAYNLLKT AAGNNIAIGPILLGAARPVHVLTESATVRRIVNMAALLVADVNATR >Mature_765_residues STKSSPKADLRAAALDYHEFPTPGKIAVQPTKQMINQRDLALAYSPGVAFACEEIVENPLNAARFTSRSNLVGVVTNGTA VLGLGNIGPLASKPVMEGKAALFKKFAGIDVFDIELNESDPHKLVEVIAALEPTFGGINLEDIKAPDCFIVERECRKRMK IPVFHDDQHGTAIVVAAAVTNGLKVVGKDIKQVKLVASGAGAAALACLDLLVDIGLPLENIFVTDLAGVVYRGRAELMDP DKERFARETDARTLAEVIEGADIFLGLSAAGVLKQEMVKGMAERPLILALANPTPEILPEVAHEVRPDAILATGRTDYPN QVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIAELAQQEQSDIVATAYAIEDLSFGPEYLIPKPFDPRLIVKIAPAV AKAAMEGGVATRPIEDMDAYVQHLQQFVYHSGNTMKPVFQAARSAPLEKKRVVFAEGEEERVLRAVQILVDEHVAKPILI GRPHVIENRIKRFGLRIAPGVDFTIVNTEHDERYRDFWQTYYQLMVRKGMGPQLAKLEMRRRTTLIGAMLVKKGEADGMI CGTISTTHRHLHFIDQVIGKREGCSVYAAMNGLVLPGRQIFIVDTHVNVDPTPEQLAEITMMAAEEVRRFGIEPKVALLS HSNFGTSNAPTAQKMRDTLALLKERAPGLEVDGEMHGDVALDPLLRKEILPDSTLEGEANLLVLPNIDAANIAYNLLKTA AGNNIAIGPILLGAARPVHVLTESATVRRIVNMAALLVADVNATR
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=343, Percent_Identity=27.4052478134111, Blast_Score=90, Evalue=9e-18, Organism=Homo sapiens, GI62420882, Length=352, Percent_Identity=28.6931818181818, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI62420880, Length=352, Percent_Identity=28.6931818181818, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI239049447, Length=352, Percent_Identity=28.6931818181818, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI4505145, Length=352, Percent_Identity=26.4204545454545, Blast_Score=71, Evalue=5e-12, Organism=Homo sapiens, GI270265879, Length=318, Percent_Identity=27.6729559748428, Blast_Score=70, Evalue=9e-12, Organism=Escherichia coli, GI1788806, Length=752, Percent_Identity=62.8989361702128, Blast_Score=970, Evalue=0.0, Organism=Escherichia coli, GI1788800, Length=316, Percent_Identity=32.2784810126582, Blast_Score=148, Evalue=1e-36, Organism=Escherichia coli, GI1788635, Length=340, Percent_Identity=30.5882352941176, Blast_Score=147, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17537199, Length=466, Percent_Identity=24.8927038626609, Blast_Score=80, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6322823, Length=239, Percent_Identity=30.5439330543933, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI281362672, Length=473, Percent_Identity=27.6955602536998, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI281362674, Length=473, Percent_Identity=27.6955602536998, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI21356279, Length=473, Percent_Identity=27.6955602536998, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI78707242, Length=410, Percent_Identity=25.8536585365854, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI78707238, Length=410, Percent_Identity=25.8536585365854, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI24646388, Length=370, Percent_Identity=28.9189189189189, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI78707240, Length=349, Percent_Identity=26.0744985673352, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI24646386, Length=370, Percent_Identity=28.9189189189189, Blast_Score=79, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 83220; Mature: 83089
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKSSPKADLRAAALDYHEFPTPGKIAVQPTKQMINQRDLALAYSPGVAFACEEIVENP CCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCEEEEECCCHHHHHHHHHHCC LNAARFTSRSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAALFKKFAGIDVFDIELNES CHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC DPHKLVEVIAALEPTFGGINLEDIKAPDCFIVERECRKRMKIPVFHDDQHGTAIVVAAAV CHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEHHHHHCCCCCEEECCCCCCEEEEEEHH TNGLKVVGKDIKQVKLVASGAGAAALACLDLLVDIGLPLENIFVTDLAGVVYRGRAELMD HCCHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCCC PDKERFARETDARTLAEVIEGADIFLGLSAAGVLKQEMVKGMAERPLILALANPTPEILP CCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH EVAHEVRPDAILATGRTDYPNQVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIAELA HHHHHCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QQEQSDIVATAYAIEDLSFGPEYLIPKPFDPRLIVKIAPAVAKAAMEGGVATRPIEDMDA HHHHCCCEEHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCHHHHHH YVQHLQQFVYHSGNTMKPVFQAARSAPLEKKRVVFAEGEEERVLRAVQILVDEHVAKPIL HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEE IGRPHVIENRIKRFGLRIAPGVDFTIVNTEHDERYRDFWQTYYQLMVRKGMGPQLAKLEM ECCCHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RRRTTLIGAMLVKKGEADGMICGTISTTHRHLHFIDQVIGKREGCSVYAAMNGLVLPGRQ HHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCE IFIVDTHVNVDPTPEQLAEITMMAAEEVRRFGIEPKVALLSHSNFGTSNAPTAQKMRDTL EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHH ALLKERAPGLEVDGEMHGDVALDPLLRKEILPDSTLEGEANLLVLPNIDAANIAYNLLKT HHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHH AAGNNIAIGPILLGAARPVHVLTESATVRRIVNMAALLVADVNATR CCCCCEEEHHEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STKSSPKADLRAAALDYHEFPTPGKIAVQPTKQMINQRDLALAYSPGVAFACEEIVENP CCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCEEEEECCCHHHHHHHHHHCC LNAARFTSRSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAALFKKFAGIDVFDIELNES CHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC DPHKLVEVIAALEPTFGGINLEDIKAPDCFIVERECRKRMKIPVFHDDQHGTAIVVAAAV CHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEHHHHHCCCCCEEECCCCCCEEEEEEHH TNGLKVVGKDIKQVKLVASGAGAAALACLDLLVDIGLPLENIFVTDLAGVVYRGRAELMD HCCHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCCC PDKERFARETDARTLAEVIEGADIFLGLSAAGVLKQEMVKGMAERPLILALANPTPEILP CCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH EVAHEVRPDAILATGRTDYPNQVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIAELA HHHHHCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QQEQSDIVATAYAIEDLSFGPEYLIPKPFDPRLIVKIAPAVAKAAMEGGVATRPIEDMDA HHHHCCCEEHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCHHHHHH YVQHLQQFVYHSGNTMKPVFQAARSAPLEKKRVVFAEGEEERVLRAVQILVDEHVAKPIL HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEE IGRPHVIENRIKRFGLRIAPGVDFTIVNTEHDERYRDFWQTYYQLMVRKGMGPQLAKLEM ECCCHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RRRTTLIGAMLVKKGEADGMICGTISTTHRHLHFIDQVIGKREGCSVYAAMNGLVLPGRQ HHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCE IFIVDTHVNVDPTPEQLAEITMMAAEEVRRFGIEPKVALLSHSNFGTSNAPTAQKMRDTL EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHH ALLKERAPGLEVDGEMHGDVALDPLLRKEILPDSTLEGEANLLVLPNIDAANIAYNLLKT HHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHH AAGNNIAIGPILLGAARPVHVLTESATVRRIVNMAALLVADVNATR CCCCCEEEHHEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]