| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is thiL [H]
Identifier: 238026197
GI number: 238026197
Start: 555517
End: 556506
Strand: Reverse
Name: thiL [H]
Synonym: bglu_1g05280
Alternate gene names: 238026197
Gene position: 556506-555517 (Counterclockwise)
Preceding gene: 238026201
Following gene: 238026196
Centisome position: 14.25
GC content: 74.04
Gene sequence:
>990_bases CTGTCCGAATTCTCGTTGATCGACCGCTATTTCGCACGCCGGGCGCGGCGCCCGAATGCGCGCGCCGCGCTCGGCATCGG CGACGATTGCGCGCTGTTGGCGCCCCATCCGGATACGATGCTGGCGATTTCGACGGATATGCTGGTGGAAGGCCGTCACT TCTTCCCCGACGTGGCGCCGCGCGCACTCGGCCACAAGACGCTGGCCGTCAACCTCTCCGACCTCGCCGCGATGGGCGCC CAGCCGCGCGCGTTCACGCTCGCGTTCGCGCTGCCGCGCGCCGACGCCGACTGGCTCGACGCGTTTGCCGACGGTTTGTT TACGATTGCCGATCGCTACGGCTGCGAGCTGGTGGGCGGCGACACCACGAGCGGGCCGCTCAACCTGTGCGTGACCGTGT TCGGCGACGTCGGCCCGGATCGCGCGCTGCGCCGCGACGCCGCGCGCCCCGGCGACGAGGTGTGGGTGTCGGGCACGCTC GGCGACGCGCGCGCCGGCCTCGGCGTGGCACGCGGCGAGTGGACGGCCGGCACGGCCGAACATGCGACATTTCGCCGCGC ACTTGAATGGCCGGAACCGCGCGTCGCGCTCGGCCTCGCGCTGGCCGGCATCGCGCACGCCGCGCTCGACGTCTCCGACG GCCTCGCGGGCGACCTGCGGCACATCCTCGAGCGCTCGCGCGTGAGCGCCGACATCGAGGTGGACGCGGTGCCGCGCTCG GCCGCGCTCGCCACGCTCGCGCCCGAGCTGCAGCGCCTCTGCACGCTGGCGGGCGGCGACGACTACGAACTCTGCTTCAC GGCGCCGGCCGCCGCGCACGCGGCGGTGCTGGCCGCCGGCACGACGGCCGGCGTGGCGGTCACGCGGATCGGCACGATCC GCGCGCTTGCCGCGCCCGAGGAGGCGCCCGGCATCCGCTGGCTCGACGGCGCCGGCACGCCGCTCGCACTGACGCTGCGC GGCTTCGATCACTTCCATGGCGACCAGTGA
Upstream 100 bases:
>100_bases CGACGGCCGCGGCCGGAATGCACGTGACGGCGGCCCGCCCGCCTTACAATGGCCGCCCTTCATCCTGTCGCCTGAAAGGC TCGCCGTGGTCACCTCTGCC
Downstream 100 bases:
>100_bases CGATCCGGCGCCGCGCGCCGACGCCCCCCGCCCCGGCACGGCCCTCGCGACGGTGCACGGCCAAGGCCGTGCCTCGCCCC GCGCCGGCCGTCCCGAGGCG
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSEFSLIDRYFARRARRPNARAALGIGDDCALLAPHPDTMLAISTDMLVEGRHFFPDVAPRALGHKTLAVNLSDLAAMGA QPRAFTLAFALPRADADWLDAFADGLFTIADRYGCELVGGDTTSGPLNLCVTVFGDVGPDRALRRDAARPGDEVWVSGTL GDARAGLGVARGEWTAGTAEHATFRRALEWPEPRVALGLALAGIAHAALDVSDGLAGDLRHILERSRVSADIEVDAVPRS AALATLAPELQRLCTLAGGDDYELCFTAPAAAHAAVLAAGTTAGVAVTRIGTIRALAAPEEAPGIRWLDGAGTPLALTLR GFDHFHGDQ
Sequences:
>Translated_329_residues MSEFSLIDRYFARRARRPNARAALGIGDDCALLAPHPDTMLAISTDMLVEGRHFFPDVAPRALGHKTLAVNLSDLAAMGA QPRAFTLAFALPRADADWLDAFADGLFTIADRYGCELVGGDTTSGPLNLCVTVFGDVGPDRALRRDAARPGDEVWVSGTL GDARAGLGVARGEWTAGTAEHATFRRALEWPEPRVALGLALAGIAHAALDVSDGLAGDLRHILERSRVSADIEVDAVPRS AALATLAPELQRLCTLAGGDDYELCFTAPAAAHAAVLAAGTTAGVAVTRIGTIRALAAPEEAPGIRWLDGAGTPLALTLR GFDHFHGDQ >Mature_328_residues SEFSLIDRYFARRARRPNARAALGIGDDCALLAPHPDTMLAISTDMLVEGRHFFPDVAPRALGHKTLAVNLSDLAAMGAQ PRAFTLAFALPRADADWLDAFADGLFTIADRYGCELVGGDTTSGPLNLCVTVFGDVGPDRALRRDAARPGDEVWVSGTLG DARAGLGVARGEWTAGTAEHATFRRALEWPEPRVALGLALAGIAHAALDVSDGLAGDLRHILERSRVSADIEVDAVPRSA ALATLAPELQRLCTLAGGDDYELCFTAPAAAHAAVLAAGTTAGVAVTRIGTIRALAAPEEAPGIRWLDGAGTPLALTLRG FDHFHGDQ
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=326, Percent_Identity=45.0920245398773, Blast_Score=241, Evalue=6e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 34515; Mature: 34384
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFSLIDRYFARRARRPNARAALGIGDDCALLAPHPDTMLAISTDMLVEGRHFFPDVAP CCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCEEEEEHHHEECCCCCCCCHHH RALGHKTLAVNLSDLAAMGAQPRAFTLAFALPRADADWLDAFADGLFTIADRYGCELVGG HHHCCEEEEEEHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEECC DTTSGPLNLCVTVFGDVGPDRALRRDAARPGDEVWVSGTLGDARAGLGVARGEWTAGTAE CCCCCHHEEEEEEECCCCCHHHHHHHCCCCCCCEEEECCCCCHHHCCEEECCCCCCCCHH HATFRRALEWPEPRVALGLALAGIAHAALDVSDGLAGDLRHILERSRVSADIEVDAVPRS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCH AALATLAPELQRLCTLAGGDDYELCFTAPAAAHAAVLAAGTTAGVAVTRIGTIRALAAPE HHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHEECCCCCCEEEEHHHHHHEECCCC EAPGIRWLDGAGTPLALTLRGFDHFHGDQ CCCCCEEECCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure SEFSLIDRYFARRARRPNARAALGIGDDCALLAPHPDTMLAISTDMLVEGRHFFPDVAP CHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCEEEEEHHHEECCCCCCCCHHH RALGHKTLAVNLSDLAAMGAQPRAFTLAFALPRADADWLDAFADGLFTIADRYGCELVGG HHHCCEEEEEEHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEECC DTTSGPLNLCVTVFGDVGPDRALRRDAARPGDEVWVSGTLGDARAGLGVARGEWTAGTAE CCCCCHHEEEEEEECCCCCHHHHHHHCCCCCCCEEEECCCCCHHHCCEEECCCCCCCCHH HATFRRALEWPEPRVALGLALAGIAHAALDVSDGLAGDLRHILERSRVSADIEVDAVPRS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCH AALATLAPELQRLCTLAGGDDYELCFTAPAAAHAAVLAAGTTAGVAVTRIGTIRALAAPE HHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHEECCCCCCEEEEHHHHHHEECCCC EAPGIRWLDGAGTPLALTLRGFDHFHGDQ CCCCCEEECCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]