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The map label for this gene is rsmE [H]

Identifier: 238026201

GI number: 238026201

Start: 560680

End: 561441

Strand: Reverse

Name: rsmE [H]

Synonym: bglu_1g05320

Alternate gene names: 238026201

Gene position: 561441-560680 (Counterclockwise)

Preceding gene: 238026202

Following gene: 238026197

Centisome position: 14.37

GC content: 74.67

Gene sequence:

>762_bases
ATGAGCGGCAGCACTTCCGCGATCCCGCGCTTCTTCGTCGATCGCCCGCTGCAGGCCGACAGCGAGGTGATGCTGCCCGC
CGAGGTCGCCCGCCACGTGCAGGTGCTGCGCCTCGAACCGGGCGATCCGCTGACGCTGTTCGACGGCACGGGCGGCCAGT
ACCGCGCCGAGCTCGTCGAGCTCGGCAAGCGCAACGCCGTGGCCCGCACCGTCGGCTTCGACGCGCGCGAACTCGAGACG
CCGTACCGCGTCACGCTTGCCCAGGGCATCGCCGGCGGCGACAAGATGGACTGGCTGATCGAGAAGGCCGTCGAGCTCGG
CGTCACGGCGCTCGCGCCGCTTTCGACCGCGCGCGGCGTGGTGCGCTTGTCCGGCGAGCGCGCGGACAAGCGCGTCGCCC
ATTGGCAAGGCGTGGTGCGCGCCGCCTGCGAGCAGTGCGGCCGCAACCGCGTGCCGGCGGTCGCGCCGATCGCGGAGCTT
TCGGCCTGGCTCGACGCCCTGCCGCCCGCGGCCGACGCCGAGCTGCGGCTGATGCTCTCGCCGCGCGCGAGCATCGCGTT
CGCGGCGCTGCCGGCCACGGCGCCCGCCGGCACGGTCACGCTGCTGATCGGCCCGGAAGGCGGGCTGTCGCCGGCCGAGG
AGGACGCGGCGCGCAAGCACGGCTTCCAGGCAATCGTGCTCGGCGCGCGCGTGCTGCGCACCGAGACGGCCGGCATGGCC
ATGCTGGCGGCACTGGCCGCGCGCTGGGGCGGATGGGAATGA

Upstream 100 bases:

>100_bases
AATCGCTGAGCGAGCCGCGCGATCAGTTCTGGGGGGACCGTTTCGCACAGGTCGAGGATCTCGACGGCTACCGCTGGGCG
CTGGCGCGGCGCATCGAGCA

Downstream 100 bases:

>100_bases
GGCGGTGACGCGCGACGCCGAAGGCGCAGGCCAAAAGGAAAAGGCCCGCTCGCGAGCGGGCCTTGCCGGTGCCGGCCGAT
GACGGGAAACAGCGGCAAAA

Product: 16S ribosomal RNA methyltransferase RsmE

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSGSTSAIPRFFVDRPLQADSEVMLPAEVARHVQVLRLEPGDPLTLFDGTGGQYRAELVELGKRNAVARTVGFDARELET
PYRVTLAQGIAGGDKMDWLIEKAVELGVTALAPLSTARGVVRLSGERADKRVAHWQGVVRAACEQCGRNRVPAVAPIAEL
SAWLDALPPAADAELRLMLSPRASIAFAALPATAPAGTVTLLIGPEGGLSPAEEDAARKHGFQAIVLGARVLRTETAGMA
MLAALAARWGGWE

Sequences:

>Translated_253_residues
MSGSTSAIPRFFVDRPLQADSEVMLPAEVARHVQVLRLEPGDPLTLFDGTGGQYRAELVELGKRNAVARTVGFDARELET
PYRVTLAQGIAGGDKMDWLIEKAVELGVTALAPLSTARGVVRLSGERADKRVAHWQGVVRAACEQCGRNRVPAVAPIAEL
SAWLDALPPAADAELRLMLSPRASIAFAALPATAPAGTVTLLIGPEGGLSPAEEDAARKHGFQAIVLGARVLRTETAGMA
MLAALAARWGGWE
>Mature_252_residues
SGSTSAIPRFFVDRPLQADSEVMLPAEVARHVQVLRLEPGDPLTLFDGTGGQYRAELVELGKRNAVARTVGFDARELETP
YRVTLAQGIAGGDKMDWLIEKAVELGVTALAPLSTARGVVRLSGERADKRVAHWQGVVRAACEQCGRNRVPAVAPIAELS
AWLDALPPAADAELRLMLSPRASIAFAALPATAPAGTVTLLIGPEGGLSPAEEDAARKHGFQAIVLGARVLRTETAGMAM
LAALAARWGGWE

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

Organism=Escherichia coli, GI87082186, Length=244, Percent_Identity=40.5737704918033, Blast_Score=184, Evalue=4e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015947
- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 26747; Mature: 26616

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSTSAIPRFFVDRPLQADSEVMLPAEVARHVQVLRLEPGDPLTLFDGTGGQYRAELVE
CCCCCCCCHHHHHCCCCCCCCCEECHHHHHCCEEEEEECCCCCEEEEECCCCHHHHHHHH
LGKRNAVARTVGFDARELETPYRVTLAQGIAGGDKMDWLIEKAVELGVTALAPLSTARGV
HCCCCHHHHHHCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCE
VRLSGERADKRVAHWQGVVRAACEQCGRNRVPAVAPIAELSAWLDALPPAADAELRLMLS
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEC
PRASIAFAALPATAPAGTVTLLIGPEGGLSPAEEDAARKHGFQAIVLGARVLRTETAGMA
CCCCEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHH
MLAALAARWGGWE
HHHHHHHHCCCCC
>Mature Secondary Structure 
SGSTSAIPRFFVDRPLQADSEVMLPAEVARHVQVLRLEPGDPLTLFDGTGGQYRAELVE
CCCCCCCHHHHHCCCCCCCCCEECHHHHHCCEEEEEECCCCCEEEEECCCCHHHHHHHH
LGKRNAVARTVGFDARELETPYRVTLAQGIAGGDKMDWLIEKAVELGVTALAPLSTARGV
HCCCCHHHHHHCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCE
VRLSGERADKRVAHWQGVVRAACEQCGRNRVPAVAPIAELSAWLDALPPAADAELRLMLS
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEC
PRASIAFAALPATAPAGTVTLLIGPEGGLSPAEEDAARKHGFQAIVLGARVLRTETAGMA
CCCCEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHH
MLAALAARWGGWE
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]