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The map label for this gene is pilC [H]

Identifier: 238026149

GI number: 238026149

Start: 506312

End: 507520

Strand: Reverse

Name: pilC [H]

Synonym: bglu_1g04790

Alternate gene names: 238026149

Gene position: 507520-506312 (Counterclockwise)

Preceding gene: 238026150

Following gene: 238026148

Centisome position: 12.99

GC content: 76.01

Gene sequence:

>1209_bases
ATGAGCACGCCGCCCGCTGCCGACCGGCGGTTCCGCTGGGCCGGGCTCGCGCAGGACGGCACACGCCGGCGTGGCACGCT
GATTGCCTGCGACGCGTCCGCCGCACGCCGTGCGTTGCGCCGGCGCGGCATCACGGTGCTGGCGCTCGACGGCGGCGGCG
CGGCCCGCGCCCCGGCCGCCCGCGCCCGCGACGTCACGCGCTTCACACATCAGCTGGGCGGCCTGCTGCGGGCAGGCCTG
CCGCTCGCGCCGGCGCTCGAGTTGCTGGCCGACGCCGGCGGCCACCGCGACCTGCCGCGCATCGCCGCCGGGCTGGCCCG
CGCGATCGGCGCGGGGCGGCAACTGTCGGAGGCCATGCGCCAGTATCCGCGGCAATTCGATCCGATGTTCCGGCAGTTGG
TGGCGGTCGGCGAGGCGTCGGGCACGCTCGCGCCGCTGCTCGCGCGCGTCGCCGCGGATCGCGAGCGCGGCGCGGCGCAG
CGCGCCCGGGTGCGTACCGCGCTGGCCTACCCGCTCGCGGTGCTGGCGTTCTCGCTCGCGATCAGCGCGGCGCTTCTGGT
GTGGGTCGTGCCGACCTTCGCGCAGATCTTCGACGGCTTCGGCGCAAGGCTGCCGGCGCCGACCCGTTTCGTGCTCACGC
TGTCCGCCACGGTCGCGCGGGCCGGGCCGCCCGCGGCGATCGCGGCAGCCGCCGCCGGCTTCACGCTGGCGGCGCTGCTG
CACCGCTCGGCCGCGCTGCGTCTGACCGCTGCGCGCGCGACGCTCAGGCTGCCGCTGGTCGGCCCGCTGCTGCGCACGCT
GGCCGCCGCGCGCTGGAGCCGCACGCTCGGCACGCTGCTGCGCGCCGGCACGCCGCTCGCCGATGCGTTCGATTCGCTCG
CGCAGGCCACCGGCAACCCGGTCTTCGATCGCGCGACCGACGCGATCGCCGCCCGGCTGCTGCGCGGCGAGCGTCTCGCG
CAGGCGATGCGCGCGGCCGGCTGCTTCCCCGACGAGGTCGTGCAGCCGGTGGCGGTGGCCGAGGAATCGGGCACGCTCGA
CGCGATGCTGGCCGATATCGCAACGCTCTGTGAGCGTCAGGTCGATGAGCAGATCGCCCTGCTGACGAGCCTCTGCGAAC
CGCTCGTGGTGATCGTGCTCGGCGCGCTGGTGGGCGGGCTCGTGGTCGCGATGTACCTGCCGATCGTTCAACTCGGCAAC
GTGGTGTAG

Upstream 100 bases:

>100_bases
CGCGCGATGACGGCATGCGCACGTTACGCGACGCCGCACTCGAGCGCGTGTACGACGGCACGACGAGCCTCGACGAGGCG
CTCGCGACCACGGACGCCGC

Downstream 100 bases:

>100_bases
CATCGCTCCCGGTTGCCGCGCTTCGCTTTCTCCCTCTTTCCCGAACGGTTTCGATGATCTCGCCCCTCGCCCTGTCCGAT
CCGTCGCTCGCGTTCGCCGC

Product: type IV pilus biogenesis protein PilC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MSTPPAADRRFRWAGLAQDGTRRRGTLIACDASAARRALRRRGITVLALDGGGAARAPAARARDVTRFTHQLGGLLRAGL
PLAPALELLADAGGHRDLPRIAAGLARAIGAGRQLSEAMRQYPRQFDPMFRQLVAVGEASGTLAPLLARVAADRERGAAQ
RARVRTALAYPLAVLAFSLAISAALLVWVVPTFAQIFDGFGARLPAPTRFVLTLSATVARAGPPAAIAAAAAGFTLAALL
HRSAALRLTAARATLRLPLVGPLLRTLAAARWSRTLGTLLRAGTPLADAFDSLAQATGNPVFDRATDAIAARLLRGERLA
QAMRAAGCFPDEVVQPVAVAEESGTLDAMLADIATLCERQVDEQIALLTSLCEPLVVIVLGALVGGLVVAMYLPIVQLGN
VV

Sequences:

>Translated_402_residues
MSTPPAADRRFRWAGLAQDGTRRRGTLIACDASAARRALRRRGITVLALDGGGAARAPAARARDVTRFTHQLGGLLRAGL
PLAPALELLADAGGHRDLPRIAAGLARAIGAGRQLSEAMRQYPRQFDPMFRQLVAVGEASGTLAPLLARVAADRERGAAQ
RARVRTALAYPLAVLAFSLAISAALLVWVVPTFAQIFDGFGARLPAPTRFVLTLSATVARAGPPAAIAAAAAGFTLAALL
HRSAALRLTAARATLRLPLVGPLLRTLAAARWSRTLGTLLRAGTPLADAFDSLAQATGNPVFDRATDAIAARLLRGERLA
QAMRAAGCFPDEVVQPVAVAEESGTLDAMLADIATLCERQVDEQIALLTSLCEPLVVIVLGALVGGLVVAMYLPIVQLGN
VV
>Mature_401_residues
STPPAADRRFRWAGLAQDGTRRRGTLIACDASAARRALRRRGITVLALDGGGAARAPAARARDVTRFTHQLGGLLRAGLP
LAPALELLADAGGHRDLPRIAAGLARAIGAGRQLSEAMRQYPRQFDPMFRQLVAVGEASGTLAPLLARVAADRERGAAQR
ARVRTALAYPLAVLAFSLAISAALLVWVVPTFAQIFDGFGARLPAPTRFVLTLSATVARAGPPAAIAAAAAGFTLAALLH
RSAALRLTAARATLRLPLVGPLLRTLAAARWSRTLGTLLRAGTPLADAFDSLAQATGNPVFDRATDAIAARLLRGERLAQ
AMRAAGCFPDEVVQPVAVAEESGTLDAMLADIATLCERQVDEQIALLTSLCEPLVVIVLGALVGGLVVAMYLPIVQLGNV
V

Specific function: Involved in the translocation of the type IV pilin (pilA) [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=404, Percent_Identity=30.4455445544554, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1786295, Length=398, Percent_Identity=28.643216080402, Blast_Score=144, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 41985; Mature: 41853

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPPAADRRFRWAGLAQDGTRRRGTLIACDASAARRALRRRGITVLALDGGGAARAPAA
CCCCCCCCCCEEECCCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCHH
RARDVTRFTHQLGGLLRAGLPLAPALELLADAGGHRDLPRIAAGLARAIGAGRQLSEAMR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
QYPRQFDPMFRQLVAVGEASGTLAPLLARVAADRERGAAQRARVRTALAYPLAVLAFSLA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISAALLVWVVPTFAQIFDGFGARLPAPTRFVLTLSATVARAGPPAAIAAAAAGFTLAALL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHH
HRSAALRLTAARATLRLPLVGPLLRTLAAARWSRTLGTLLRAGTPLADAFDSLAQATGNP
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
VFDRATDAIAARLLRGERLAQAMRAAGCFPDEVVQPVAVAEESGTLDAMLADIATLCERQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VDEQIALLTSLCEPLVVIVLGALVGGLVVAMYLPIVQLGNVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STPPAADRRFRWAGLAQDGTRRRGTLIACDASAARRALRRRGITVLALDGGGAARAPAA
CCCCCCCCCEEECCCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCHH
RARDVTRFTHQLGGLLRAGLPLAPALELLADAGGHRDLPRIAAGLARAIGAGRQLSEAMR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
QYPRQFDPMFRQLVAVGEASGTLAPLLARVAADRERGAAQRARVRTALAYPLAVLAFSLA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISAALLVWVVPTFAQIFDGFGARLPAPTRFVLTLSATVARAGPPAAIAAAAAGFTLAALL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHH
HRSAALRLTAARATLRLPLVGPLLRTLAAARWSRTLGTLLRAGTPLADAFDSLAQATGNP
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
VFDRATDAIAARLLRGERLAQAMRAAGCFPDEVVQPVAVAEESGTLDAMLADIATLCERQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VDEQIALLTSLCEPLVVIVLGALVGGLVVAMYLPIVQLGNVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1971619; 10984043 [H]