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The map label for this gene is tapB [H]

Identifier: 238026150

GI number: 238026150

Start: 507517

End: 508677

Strand: Reverse

Name: tapB [H]

Synonym: bglu_1g04800

Alternate gene names: 238026150

Gene position: 508677-507517 (Counterclockwise)

Preceding gene: 238026151

Following gene: 238026149

Centisome position: 13.02

GC content: 72.52

Gene sequence:

>1161_bases
GTGGTCGCGCTCGTCAACGAGATCCTGAACGAGGCGGCACGCCGCGACGCCTCCGACATCCATATCGAGGCGGCCGAACG
CGCCTGGCGCGTGCGCCTGCGCATCGACGGCGCGCTGCATCCGTTCGCGGCCCCGCCCGTGCATCTGCGCGACGGCGTGG
TCACGCGCCTGAAGGTGTTGGCGCGGATGGACATCGCGGAACGCCGCGTCCCCCAGGACGGCCGGCTGCGAATCGCGCTC
GGCCATGGCGTGACGGGCGACTACCGGGTCAGCTCGCTGCCCACGCTGCACGGCGAGAAGCTCGTGCTGCGGCGCCTCGA
CACGCTGCCGGCCGATCTGTCGCTGCCGGCGCTCGGTTTCGCCGCGCGCCAGGCCGAGGCCCTGGAGGCCGCGATCGCCG
CGCCGCACGGGCTCGTGCTCGTCACCGGCCCGACCGGCAGCGGCAAGACGGTGACGCTCTACTGCTGCCTGCAGCGGCTC
AATCTGGCCTCGCGCAACCTCTGCACGATCGAGGATCCGGCCGAGCTGCAGCTCGACGGGCTCAACCAGGTCAACGTGCA
CGACAAGGCCGGGCTCACGTTCGCCGTCGCGTTGCGCGCGTTCCTGCGGCAGGACCCGGACGTGCTCATGATCGGCGAGA
TCCGCGACGCCGAAACGGCCGACGTCGCGCTCAAGGCCGCACAAACCGGCCATCTCGTGCTCTCGACGCTGCATACCAAC
GATGCGCCGGGGGCGATCGCGCGCCTGCTCGATATCGGCGTGGCGCCTTACCACGTCGCGTCGGCATTGCGCGTCGTCAC
CGCACAACGGCTCGTCAGACGGCTCTGCGCCGCGTGCCGACAGCCGTCGTCCGCGCCGGCGGCGCGCCTTGCCGCCGGCG
GGCTCGATCCCGTCGCGCTCGGCGCCGGCTGGCGTCCGTTTGCCGCCGTCGGCTGCGAAGCCTGCCACGGCATCGGCTAC
CGCGGCCGGATCGGCGTACATCAGGTGATGGCCGTGTCGGACACGCTGCGCGAGCGGATCGTCGCCCGCGCCGGCAGTCT
GGCGCTCGCGCGGCAGGCGCGCGATGACGGCATGCGCACGTTACGCGACGCCGCACTCGAGCGCGTGTACGACGGCACGA
CGAGCCTCGACGAGGCGCTCGCGACCACGGACGCCGCATGA

Upstream 100 bases:

>100_bases
TCGTGATCAACAGGCGGTCGCAAGGCCGGTCGAAGTGTCCACACCTTCCGCACCCTTTTCCCCGGAGGCGGGCCGGCTCG
CGCCGGCCGGCGACGCACCG

Downstream 100 bases:

>100_bases
GCACGCCGCCCGCTGCCGACCGGCGGTTCCGCTGGGCCGGGCTCGCGCAGGACGGCACACGCCGGCGTGGCACGCTGATT
GCCTGCGACGCGTCCGCCGC

Product: type IV fimbrial biogenesis protein,PilB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MVALVNEILNEAARRDASDIHIEAAERAWRVRLRIDGALHPFAAPPVHLRDGVVTRLKVLARMDIAERRVPQDGRLRIAL
GHGVTGDYRVSSLPTLHGEKLVLRRLDTLPADLSLPALGFAARQAEALEAAIAAPHGLVLVTGPTGSGKTVTLYCCLQRL
NLASRNLCTIEDPAELQLDGLNQVNVHDKAGLTFAVALRAFLRQDPDVLMIGEIRDAETADVALKAAQTGHLVLSTLHTN
DAPGAIARLLDIGVAPYHVASALRVVTAQRLVRRLCAACRQPSSAPAARLAAGGLDPVALGAGWRPFAAVGCEACHGIGY
RGRIGVHQVMAVSDTLRERIVARAGSLALARQARDDGMRTLRDAALERVYDGTTSLDEALATTDAA

Sequences:

>Translated_386_residues
MVALVNEILNEAARRDASDIHIEAAERAWRVRLRIDGALHPFAAPPVHLRDGVVTRLKVLARMDIAERRVPQDGRLRIAL
GHGVTGDYRVSSLPTLHGEKLVLRRLDTLPADLSLPALGFAARQAEALEAAIAAPHGLVLVTGPTGSGKTVTLYCCLQRL
NLASRNLCTIEDPAELQLDGLNQVNVHDKAGLTFAVALRAFLRQDPDVLMIGEIRDAETADVALKAAQTGHLVLSTLHTN
DAPGAIARLLDIGVAPYHVASALRVVTAQRLVRRLCAACRQPSSAPAARLAAGGLDPVALGAGWRPFAAVGCEACHGIGY
RGRIGVHQVMAVSDTLRERIVARAGSLALARQARDDGMRTLRDAALERVYDGTTSLDEALATTDAA
>Mature_386_residues
MVALVNEILNEAARRDASDIHIEAAERAWRVRLRIDGALHPFAAPPVHLRDGVVTRLKVLARMDIAERRVPQDGRLRIAL
GHGVTGDYRVSSLPTLHGEKLVLRRLDTLPADLSLPALGFAARQAEALEAAIAAPHGLVLVTGPTGSGKTVTLYCCLQRL
NLASRNLCTIEDPAELQLDGLNQVNVHDKAGLTFAVALRAFLRQDPDVLMIGEIRDAETADVALKAAQTGHLVLSTLHTN
DAPGAIARLLDIGVAPYHVASALRVVTAQRLVRRLCAACRQPSSAPAARLAAGGLDPVALGAGWRPFAAVGCEACHGIGY
RGRIGVHQVMAVSDTLRERIVARAGSLALARQARDDGMRTLRDAALERVYDGTTSLDEALATTDAA

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=380, Percent_Identity=46.0526315789474, Blast_Score=334, Evalue=5e-93,
Organism=Escherichia coli, GI1786296, Length=379, Percent_Identity=47.4934036939314, Blast_Score=314, Evalue=6e-87,
Organism=Escherichia coli, GI87082188, Length=288, Percent_Identity=35.7638888888889, Blast_Score=123, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013374
- InterPro:   IPR007831
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 41113; Mature: 41113

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALVNEILNEAARRDASDIHIEAAERAWRVRLRIDGALHPFAAPPVHLRDGVVTRLKVL
CHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCHHHCHHHHHHHHH
ARMDIAERRVPQDGRLRIALGHGVTGDYRVSSLPTLHGEKLVLRRLDTLPADLSLPALGF
HHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHH
AARQAEALEAAIAAPHGLVLVTGPTGSGKTVTLYCCLQRLNLASRNLCTIEDPAELQLDG
HHHHHHHHHHHHCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCCCCEEECCCCCCEEECC
LNQVNVHDKAGLTFAVALRAFLRQDPDVLMIGEIRDAETADVALKAAQTGHLVLSTLHTN
CCEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCC
DAPGAIARLLDIGVAPYHVASALRVVTAQRLVRRLCAACRQPSSAPAARLAAGGLDPVAL
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEE
GAGWRPFAAVGCEACHGIGYRGRIGVHQVMAVSDTLRERIVARAGSLALARQARDDGMRT
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LRDAALERVYDGTTSLDEALATTDAA
HHHHHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MVALVNEILNEAARRDASDIHIEAAERAWRVRLRIDGALHPFAAPPVHLRDGVVTRLKVL
CHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCHHHCHHHHHHHHH
ARMDIAERRVPQDGRLRIALGHGVTGDYRVSSLPTLHGEKLVLRRLDTLPADLSLPALGF
HHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHH
AARQAEALEAAIAAPHGLVLVTGPTGSGKTVTLYCCLQRLNLASRNLCTIEDPAELQLDG
HHHHHHHHHHHHCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCCCCEEECCCCCCEEECC
LNQVNVHDKAGLTFAVALRAFLRQDPDVLMIGEIRDAETADVALKAAQTGHLVLSTLHTN
CCEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCC
DAPGAIARLLDIGVAPYHVASALRVVTAQRLVRRLCAACRQPSSAPAARLAAGGLDPVAL
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEE
GAGWRPFAAVGCEACHGIGYRGRIGVHQVMAVSDTLRERIVARAGSLALARQARDDGMRT
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LRDAALERVYDGTTSLDEALATTDAA
HHHHHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]