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The map label for this gene is rpe [H]

Identifier: 238026113

GI number: 238026113

Start: 460848

End: 461534

Strand: Reverse

Name: rpe [H]

Synonym: bglu_1g04420

Alternate gene names: 238026113

Gene position: 461534-460848 (Counterclockwise)

Preceding gene: 238026116

Following gene: 238026112

Centisome position: 11.81

GC content: 66.81

Gene sequence:

>687_bases
ATGACGCAATTCCGCATCGCTCCCAGCATTCTGTCAGCCGATTTCGCGCGGCTCGGCGAAGAAGTCCGCAATGTCGTCGC
CGCCGGCGCCGACTGGATCCACTTCGACGTGATGGACAACCACTACGTCCCGAACCTGACGATCGGGCCGCTCGTCTGCG
AAGCGATCCGGCCGCACGTGCAGGTGCCGATCGACGTCCATCTGATGGTGCGCCCGGTGGACCGGATCGTGCCGGACTTC
GCGAAGGCGGGCGCCAACGTGATCAGCTTCCACCCGGAAGGCTCCGATCACATCGACCGCACGCTGAGCCTGATTAAGGA
CCATGGCTGCAAGGCCGGCCTCGTGTTCAACCCGGCCACGCCGCTCAACTACCTCGACCACGTGATGGACCGCCTCGATC
TGGTGCTGATCATGTCGGTGAACCCGGGCTTCGGCGGCCAGTCGTTCATCCCCGAGGCGCTGCGCAAGGTGCGCGAGGCG
CGGGCGAAGATCGACGCCTACCGCGAGCGCACCGGCCGCGAGATCCATCTCGAGGTGGACGGCGGCGTGAAGGTCGACAA
CATCGCCGAAATCGCCGCGGCGGGCGCGGACACCTTCGTGGCCGGCTCCGCGATCTTCGGCAAGCCCGACTACCGGGCCG
TGATCGACGAGATGCGCGCGTCGCTCGCCGGCGTTGCGAAGGGCTGA

Upstream 100 bases:

>100_bases
TCTGCTTGATGCCGCCAGCGCCCGCAACCGCGCGGCAGCCGGCGCCGCCCGCGGCGGTAGAATGGCGGCTTCGCATCAAC
GCACGCCCCCCGCTACCGAC

Downstream 100 bases:

>100_bases
GCCGATGACGACGATCCGCTTCGCCGCGCCGAGGCTCGCGGCCGCGCTAATCGATCTGGACGGCACCATGATCGACACCG
CCGACGATTTCACGGCGGGC

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQVPIDVHLMVRPVDRIVPDF
AKAGANVISFHPEGSDHIDRTLSLIKDHGCKAGLVFNPATPLNYLDHVMDRLDLVLIMSVNPGFGGQSFIPEALRKVREA
RAKIDAYRERTGREIHLEVDGGVKVDNIAEIAAAGADTFVAGSAIFGKPDYRAVIDEMRASLAGVAKG

Sequences:

>Translated_228_residues
MTQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQVPIDVHLMVRPVDRIVPDF
AKAGANVISFHPEGSDHIDRTLSLIKDHGCKAGLVFNPATPLNYLDHVMDRLDLVLIMSVNPGFGGQSFIPEALRKVREA
RAKIDAYRERTGREIHLEVDGGVKVDNIAEIAAAGADTFVAGSAIFGKPDYRAVIDEMRASLAGVAKG
>Mature_227_residues
TQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQVPIDVHLMVRPVDRIVPDFA
KAGANVISFHPEGSDHIDRTLSLIKDHGCKAGLVFNPATPLNYLDHVMDRLDLVLIMSVNPGFGGQSFIPEALRKVREAR
AKIDAYRERTGREIHLEVDGGVKVDNIAEIAAAGADTFVAGSAIFGKPDYRAVIDEMRASLAGVAKG

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=225, Percent_Identity=38.6666666666667, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI219879828, Length=217, Percent_Identity=37.7880184331797, Blast_Score=149, Evalue=2e-36,
Organism=Homo sapiens, GI24307923, Length=180, Percent_Identity=31.6666666666667, Blast_Score=94, Evalue=7e-20,
Organism=Escherichia coli, GI1789788, Length=227, Percent_Identity=70.9251101321586, Blast_Score=335, Evalue=1e-93,
Organism=Escherichia coli, GI1790523, Length=202, Percent_Identity=38.6138613861386, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1790754, Length=214, Percent_Identity=31.3084112149533, Blast_Score=99, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17552948, Length=219, Percent_Identity=40.6392694063927, Blast_Score=153, Evalue=6e-38,
Organism=Saccharomyces cerevisiae, GI6322341, Length=236, Percent_Identity=38.135593220339, Blast_Score=162, Evalue=5e-41,
Organism=Drosophila melanogaster, GI24586301, Length=218, Percent_Identity=36.2385321100917, Blast_Score=145, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24811; Mature: 24680

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHV
CCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCE
QVPIDVHLMVRPVDRIVPDFAKAGANVISFHPEGSDHIDRTLSLIKDHGCKAGLVFNPAT
ECCEEEEEEEECHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCC
PLNYLDHVMDRLDLVLIMSVNPGFGGQSFIPEALRKVREARAKIDAYRERTGREIHLEVD
CHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
GGVKVDNIAEIAAAGADTFVAGSAIFGKPDYRAVIDEMRASLAGVAKG
CCCCHHHHHHHHHCCCCHHEECCEEECCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHV
CCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCE
QVPIDVHLMVRPVDRIVPDFAKAGANVISFHPEGSDHIDRTLSLIKDHGCKAGLVFNPAT
ECCEEEEEEEECHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCC
PLNYLDHVMDRLDLVLIMSVNPGFGGQSFIPEALRKVREARAKIDAYRERTGREIHLEVD
CHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
GGVKVDNIAEIAAAGADTFVAGSAIFGKPDYRAVIDEMRASLAGVAKG
CCCCHHHHHHHHHCCCCHHEECCEEECCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]