| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is paaK [H]
Identifier: 238026116
GI number: 238026116
Start: 463456
End: 464751
Strand: Reverse
Name: paaK [H]
Synonym: bglu_1g04460
Alternate gene names: 238026116
Gene position: 464751-463456 (Counterclockwise)
Preceding gene: 238026117
Following gene: 238026113
Centisome position: 11.9
GC content: 68.6
Gene sequence:
>1296_bases ATGAACGCTCAACTTGCGCTCGAACCGATCGAGACCGCCAGCCGCGACGAACTGCAGGCGCTGCAGCTCGAGCGCCTGCG GTGGTCGCTCACGCACGCCTATGAGAACTCGCCTGTCTATCGACGCAAGTTCGACGCGGCGGGGGTGCATCCGCACGAGT TGCGCGGCCTCGCCGATCTCGCGCGGTTCCCGTTCACGACCAAGGACGACCTGCGCGACAACTATCCGTTCGGCATGTTC GCGGTACCGCCGGAGCGGGTCTCGCGCCTGCACGCCTCGTCCGGCACCACCGGCAAGCCTACCGTGGTCGGCTACACGGC ACGCGACATCGACACCTGGGCCGGCCTCGTCGCGCGCTCGATCCGTGCGGCCGGGGCGCGACGCGGCGACAAGGTCCACG TCAGCTACGGCTATGGCCTGTTCACGGGCGGCCTGGGCGCGCATTACGGCGCCGAGCGCGCCGGCCTGACGGTGATCCCG TTCGGCGGCGGCCAGACCGAGAAGCAGGTGCAGCTGATTCGCGATTTCCGGCCCGACATCATCATGGTGACGCCGAGCTA CATGCTGTCGATTGCCGACGAGATGGAGCGGCAGGGGCTCGACCCGCGCGAATCGTCGCTGCGGATCGGCATCTTCGGCG CCGAACCATGGACCAACGAGATGCGCGCGGCGCTCGAGGCCCGCCTGGGTATCGACGCGGTCGACATTTATGGATTGTCG GAGGTGATCGGGCCGGGAGTCGCGTCCGAATGCGCGGCCACCAAGGACGGCCCGACGGTGTGGGAGGACCACTTCTATCC GGAGGTGGTGGATCCGCTGACGGGCGAGGTGCTGCCGGACGGCGAACTCGGCGAGCTGGTGTTCACCTCGCTGACCAAGG AGGCGCTGCCGATCGTGCGCTACCGCACGCGCGATCTCACACGCCTGCTGCCCGGCACGGCGCGCCCGATGCGGCGGATG GAGAAGATCACCGGCCGTGCCGACGACATGATGATCGTTCGCGGCGTGAACGTGTTTCCGACTCAGATCGAGGAGCAGTT GCTCAAGCAACGCGCGCTGGCGCCGCATTTCCAGATCGTGCTGACGAAGGATGGCCCGCTCGACGTGATGACGCTGAACG TGGAGCCCTGCCCGCAAGCGGCGGCCGATGCCGCGCAGCTGGACGCCGCGCGTCGCGCGCTGGCCCACGACATCAAGGCG CTGATCGGCGTGAGCGCGGTGGTCGAGGTGCTGGCGCCGAACGGCATCGAGCGCTCGGTCGGCAAGGCACGCCGCGTGAT CGACCGGCGCCGCTGA
Upstream 100 bases:
>100_bases GATGTTCCGCGGCAAGTCGGCCCGGATCGGGGGCACCGTGACCGCGACCGGCGCCTGAGCGCGCCGCCGCCAGCGAACAG GACGATGGCAGGAGACACCG
Downstream 100 bases:
>100_bases AGGCCGCCGCCGGCTCACCCCGCAGGCGCCCCGCCGCGGCGGCCGCGCCTCAGGAGTTCGGCAGCAGCAGCCACATCCGG CCGACCTGCTTCATGCGGCC
Product: phenylacetate-CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MNAQLALEPIETASRDELQALQLERLRWSLTHAYENSPVYRRKFDAAGVHPHELRGLADLARFPFTTKDDLRDNYPFGMF AVPPERVSRLHASSGTTGKPTVVGYTARDIDTWAGLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIP FGGGQTEKQVQLIRDFRPDIIMVTPSYMLSIADEMERQGLDPRESSLRIGIFGAEPWTNEMRAALEARLGIDAVDIYGLS EVIGPGVASECAATKDGPTVWEDHFYPEVVDPLTGEVLPDGELGELVFTSLTKEALPIVRYRTRDLTRLLPGTARPMRRM EKITGRADDMMIVRGVNVFPTQIEEQLLKQRALAPHFQIVLTKDGPLDVMTLNVEPCPQAAADAAQLDAARRALAHDIKA LIGVSAVVEVLAPNGIERSVGKARRVIDRRR
Sequences:
>Translated_431_residues MNAQLALEPIETASRDELQALQLERLRWSLTHAYENSPVYRRKFDAAGVHPHELRGLADLARFPFTTKDDLRDNYPFGMF AVPPERVSRLHASSGTTGKPTVVGYTARDIDTWAGLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIP FGGGQTEKQVQLIRDFRPDIIMVTPSYMLSIADEMERQGLDPRESSLRIGIFGAEPWTNEMRAALEARLGIDAVDIYGLS EVIGPGVASECAATKDGPTVWEDHFYPEVVDPLTGEVLPDGELGELVFTSLTKEALPIVRYRTRDLTRLLPGTARPMRRM EKITGRADDMMIVRGVNVFPTQIEEQLLKQRALAPHFQIVLTKDGPLDVMTLNVEPCPQAAADAAQLDAARRALAHDIKA LIGVSAVVEVLAPNGIERSVGKARRVIDRRR >Mature_431_residues MNAQLALEPIETASRDELQALQLERLRWSLTHAYENSPVYRRKFDAAGVHPHELRGLADLARFPFTTKDDLRDNYPFGMF AVPPERVSRLHASSGTTGKPTVVGYTARDIDTWAGLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIP FGGGQTEKQVQLIRDFRPDIIMVTPSYMLSIADEMERQGLDPRESSLRIGIFGAEPWTNEMRAALEARLGIDAVDIYGLS EVIGPGVASECAATKDGPTVWEDHFYPEVVDPLTGEVLPDGELGELVFTSLTKEALPIVRYRTRDLTRLLPGTARPMRRM EKITGRADDMMIVRGVNVFPTQIEEQLLKQRALAPHFQIVLTKDGPLDVMTLNVEPCPQAAADAAQLDAARRALAHDIKA LIGVSAVVEVLAPNGIERSVGKARRVIDRRR
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=432, Percent_Identity=64.1203703703704, Blast_Score=573, Evalue=1e-165,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 47425; Mature: 47425
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQLALEPIETASRDELQALQLERLRWSLTHAYENSPVYRRKFDAAGVHPHELRGLADL CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHH ARFPFTTKDDLRDNYPFGMFAVPPERVSRLHASSGTTGKPTVVGYTARDIDTWAGLVARS HHCCCCCCHHHCCCCCCCEEECCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHH IRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGGGQTEKQVQLIRDFRPDI HHHHCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCE IMVTPSYMLSIADEMERQGLDPRESSLRIGIFGAEPWTNEMRAALEARLGIDAVDIYGLS EEECHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHCCHH EVIGPGVASECAATKDGPTVWEDHFYPEVVDPLTGEVLPDGELGELVFTSLTKEALPIVR HHHCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YRTRDLTRLLPGTARPMRRMEKITGRADDMMIVRGVNVFPTQIEEQLLKQRALAPHFQIV HHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEE LTKDGPLDVMTLNVEPCPQAAADAAQLDAARRALAHDIKALIGVSAVVEVLAPNGIERSV EECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GKARRVIDRRR HHHHHHHHCCC >Mature Secondary Structure MNAQLALEPIETASRDELQALQLERLRWSLTHAYENSPVYRRKFDAAGVHPHELRGLADL CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHH ARFPFTTKDDLRDNYPFGMFAVPPERVSRLHASSGTTGKPTVVGYTARDIDTWAGLVARS HHCCCCCCHHHCCCCCCCEEECCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHH IRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGGGQTEKQVQLIRDFRPDI HHHHCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCE IMVTPSYMLSIADEMERQGLDPRESSLRIGIFGAEPWTNEMRAALEARLGIDAVDIYGLS EEECHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHCCHH EVIGPGVASECAATKDGPTVWEDHFYPEVVDPLTGEVLPDGELGELVFTSLTKEALPIVR HHHCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YRTRDLTRLLPGTARPMRRMEKITGRADDMMIVRGVNVFPTQIEEQLLKQRALAPHFQIV HHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEE LTKDGPLDVMTLNVEPCPQAAADAAQLDAARRALAHDIKALIGVSAVVEVLAPNGIERSV EECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GKARRVIDRRR HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]