| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is hemA [H]
Identifier: 238026093
GI number: 238026093
Start: 438145
End: 439431
Strand: Reverse
Name: hemA [H]
Synonym: bglu_1g04210
Alternate gene names: 238026093
Gene position: 439431-438145 (Counterclockwise)
Preceding gene: 238026097
Following gene: 238026092
Centisome position: 11.25
GC content: 69.46
Gene sequence:
>1287_bases ATGCAGCTTCTCACGATCGGAATCAATCACCACACTGCGCCCGTCGCCTTGCGCGAACGCGTAGCGTTTCCGCTCGAACA GATCAAGCCTGCACTGTCCACGCTGAAGGACGTCTTCCTGGGGCGCCAGGCACGGAACGCGCCCGAGGCGGCGATTCTCT CCACCTGCAACCGCACCGAGCTCTACTGCGCCACCGACGATCGCGCCGCGCGCGACGCGGCGCTGCGCTGGCTGGCCGAC TTCCACCGCATCCCGGCCGACGAACTGGCCCCGCACGTCTACGCGCTGCCGCAGTCCGAAGCCGTGCGCCACGCGTTCCG GGTCGCCTCCGGGCTCGACTCGATGGTGCTCGGCGAAACCCAGATCGTCGGCCAGATGAAGGATGCGGTGCGCACCGCCT CGGAGGCCGGCGCGCTCGGCACCTATCTGAACCAGCTGTTCCAGCGCACCTTCGCGGTGGCCAAGGAAGTGCGCAGCACC ACCGAGATCGGTGCGCAGTCGGTGTCGATGGCCGCGGCCGCGGTGCGGCTCGCACAGCGCATCTTCGAGAACGTGGCCGA CCAGAAGGTGCTGTTCATCGGCGCGGGCGAGATGATCGAGCTCTGCGCGACGCACTTCGCCGCGCAAACGCCGCGCGAGC TGGTGGTCGCCAACCGCACCGCCGAGCGCGGCGCGAAGCTCGCCGAGCGGTTCGGCGGCCACGCGATGCCGCTCGCGGAC CTGCCCGCCCGCATGCACGAGTTCGACATCATCGTCTCGTGTACCGCCTCGACGCTGCCGATCATCGGCCTGGGCGCGGT GGAGCGCGCGGTGAAGGCGCGCCGCCGCCGGCCGATCTTCATGGTCGATCTGGCCGTGCCGCGCGACATCGAGCAGGAGG TCGGCAAGCTGAAGGACGTGTTCCTCTATACCGTCGACGATCTCGGCGCGATCGTGCGCGAAGGCAGCGCGTCGCGGCAG GCCGCCGTGGCGCAGGCCGAGACCATCATCGAGACGCGCGTGCAGCACTTCATGCAGTGGCTCGACACGCGCAGCGTGGT GCCGATCATCCGCCACATGCATACGCAGGCCGACGCGCTGCGCCGCACCGAGGTCGAGCGCGCGCAGAAGATGCTCGCGC GCGGCGACGATCCGCTCGCCGTGCTCGACGCGCTGTCGCAGGCGCTCACCAACAAGCTGATCCACGGCCCGACCTCGGCG CTGAACCGCACCAGCGGCACCGAACGCGACCAGTTGATCGACCTGATGCGCGGCTTCTACGCGCATGGCCCGCGCGCCGA CAACTAG
Upstream 100 bases:
>100_bases CGCGCGGGATGCGCCGGCGGCCCGGCGGGTCGGCAGCATGGCCGGCAGTGGGAGCAGCGGTAAGACGCTATAATGCGAAC CTAAACGATAGTCCCCGGAT
Downstream 100 bases:
>100_bases CGCCGCTGCGCCTTCGGCCGCAGTGCCGGCCCTCCCCCTTTTTCCTTTCGATTCCTCGCCCGGGAGCATCGCTCCAGATC ATGAAAACGAGCATGCAAAG
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MQLLTIGINHHTAPVALRERVAFPLEQIKPALSTLKDVFLGRQARNAPEAAILSTCNRTELYCATDDRAARDAALRWLAD FHRIPADELAPHVYALPQSEAVRHAFRVASGLDSMVLGETQIVGQMKDAVRTASEAGALGTYLNQLFQRTFAVAKEVRST TEIGAQSVSMAAAAVRLAQRIFENVADQKVLFIGAGEMIELCATHFAAQTPRELVVANRTAERGAKLAERFGGHAMPLAD LPARMHEFDIIVSCTASTLPIIGLGAVERAVKARRRRPIFMVDLAVPRDIEQEVGKLKDVFLYTVDDLGAIVREGSASRQ AAVAQAETIIETRVQHFMQWLDTRSVVPIIRHMHTQADALRRTEVERAQKMLARGDDPLAVLDALSQALTNKLIHGPTSA LNRTSGTERDQLIDLMRGFYAHGPRADN
Sequences:
>Translated_428_residues MQLLTIGINHHTAPVALRERVAFPLEQIKPALSTLKDVFLGRQARNAPEAAILSTCNRTELYCATDDRAARDAALRWLAD FHRIPADELAPHVYALPQSEAVRHAFRVASGLDSMVLGETQIVGQMKDAVRTASEAGALGTYLNQLFQRTFAVAKEVRST TEIGAQSVSMAAAAVRLAQRIFENVADQKVLFIGAGEMIELCATHFAAQTPRELVVANRTAERGAKLAERFGGHAMPLAD LPARMHEFDIIVSCTASTLPIIGLGAVERAVKARRRRPIFMVDLAVPRDIEQEVGKLKDVFLYTVDDLGAIVREGSASRQ AAVAQAETIIETRVQHFMQWLDTRSVVPIIRHMHTQADALRRTEVERAQKMLARGDDPLAVLDALSQALTNKLIHGPTSA LNRTSGTERDQLIDLMRGFYAHGPRADN >Mature_428_residues MQLLTIGINHHTAPVALRERVAFPLEQIKPALSTLKDVFLGRQARNAPEAAILSTCNRTELYCATDDRAARDAALRWLAD FHRIPADELAPHVYALPQSEAVRHAFRVASGLDSMVLGETQIVGQMKDAVRTASEAGALGTYLNQLFQRTFAVAKEVRST TEIGAQSVSMAAAAVRLAQRIFENVADQKVLFIGAGEMIELCATHFAAQTPRELVVANRTAERGAKLAERFGGHAMPLAD LPARMHEFDIIVSCTASTLPIIGLGAVERAVKARRRRPIFMVDLAVPRDIEQEVGKLKDVFLYTVDDLGAIVREGSASRQ AAVAQAETIIETRVQHFMQWLDTRSVVPIIRHMHTQADALRRTEVERAQKMLARGDDPLAVLDALSQALTNKLIHGPTSA LNRTSGTERDQLIDLMRGFYAHGPRADN
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=420, Percent_Identity=43.3333333333333, Blast_Score=339, Evalue=2e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 [H]
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 47000; Mature: 47000
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS00747 GLUTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLLTIGINHHTAPVALRERVAFPLEQIKPALSTLKDVFLGRQARNAPEAAILSTCNRTE CEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHCCCCCE LYCATDDRAARDAALRWLADFHRIPADELAPHVYALPQSEAVRHAFRVASGLDSMVLGET EEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCEEECCCHHHHHHHHHHHHCCHHHHHCHH QIVGQMKDAVRTASEAGALGTYLNQLFQRTFAVAKEVRSTTEIGAQSVSMAAAAVRLAQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFENVADQKVLFIGAGEMIELCATHFAAQTPRELVVANRTAERGAKLAERFGGHAMPLAD HHHHHCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHH LPARMHEFDIIVSCTASTLPIIGLGAVERAVKARRRRPIFMVDLAVPRDIEQEVGKLKDV HHHHHHHHHEEEEECCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH FLYTVDDLGAIVREGSASRQAAVAQAETIIETRVQHFMQWLDTRSVVPIIRHMHTQADAL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RRTEVERAQKMLARGDDPLAVLDALSQALTNKLIHGPTSALNRTSGTERDQLIDLMRGFY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHH AHGPRADN HCCCCCCC >Mature Secondary Structure MQLLTIGINHHTAPVALRERVAFPLEQIKPALSTLKDVFLGRQARNAPEAAILSTCNRTE CEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHCCCCCE LYCATDDRAARDAALRWLADFHRIPADELAPHVYALPQSEAVRHAFRVASGLDSMVLGET EEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCEEECCCHHHHHHHHHHHHCCHHHHHCHH QIVGQMKDAVRTASEAGALGTYLNQLFQRTFAVAKEVRSTTEIGAQSVSMAAAAVRLAQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFENVADQKVLFIGAGEMIELCATHFAAQTPRELVVANRTAERGAKLAERFGGHAMPLAD HHHHHCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHH LPARMHEFDIIVSCTASTLPIIGLGAVERAVKARRRRPIFMVDLAVPRDIEQEVGKLKDV HHHHHHHHHEEEEECCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH FLYTVDDLGAIVREGSASRQAAVAQAETIIETRVQHFMQWLDTRSVVPIIRHMHTQADAL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RRTEVERAQKMLARGDDPLAVLDALSQALTNKLIHGPTSALNRTSGTERDQLIDLMRGFY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHH AHGPRADN HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA