| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is hemK [H]
Identifier: 238026091
GI number: 238026091
Start: 436113
End: 436961
Strand: Reverse
Name: hemK [H]
Synonym: bglu_1g04190
Alternate gene names: 238026091
Gene position: 436961-436113 (Counterclockwise)
Preceding gene: 238026092
Following gene: 238026090
Centisome position: 11.19
GC content: 76.68
Gene sequence:
>849_bases ATGAACGCCTCGCCCGTCACCGCGGCCGGCCTGCTGCGCGCCAGCCCGCTCGACGCCGTCGACGCGCGCATCCTGCTCGC GCATGTGCTCGGCTGGAGCCGCACCCAATTAATCACGCGCGCCGACGCGCCGCTCGAGGCCGCGGCCGCCGAGCGCTTTC GCGCGCTGGAGGCGCGGCGCTCGGCCGGCGAACCGGTCGCGCAGCTGGTCGGCTCGCGCGAATTCTTCGGGCTCGCGTTC GAGGTCACGCCCGACGTGCTGATCCCGCGCCCCGAGACGGAGCTGCTGGTCGAGGCCGCGCTCGACGCGCTCGACGGCAT CGCGGCGCCCGCCGTGCTCGATCTCGGCACCGGCAGCGGCGCGGTGGCGCTGGCGATCGCCGCCGCGCGGCCCGACGCGC GCGTGACCGCGCTGGACCGCTCGGCCGCCGCGCTCGCCGTGGCGCGCCGCAACGCGGCGCGGCTGCTCGACGACGCGCGC CCCGGCGGCGCCGTGAGCTTGCTCGCAAGCGACTGGTACGCCGCGCTCGGCCCGGCGGCGCGCTTTCACGCCATCGTCAG CAATCCGCCCTACATCGCGCGGCACGATCCGCATCTCGACCAGGGCGACCTGCGCTTCGAGCCGCGCGGCGCGCTGACCG ACGAGGCCGACGGCCTGGCCGCGATCCGCCGCATCGTGGCGGGTGCCGGCGCGTTCCTGCTGCCGCGCGGCGAACTCTGG ATCGAGCACGGCTACGATCAGGCCGAGGCGGTGCGCGCGCTGCTCTTGCAGGCCGGCTTCCGCGAGGTGGCCTCGCTTGC CGACCTGGCCTCGATCGAGCGCACCACGGGCGGCCGCCGGCCCGGCTGA
Upstream 100 bases:
>100_bases GCGACCTCGACGAGCTGATCGCCTCGCTCGCGAGCGAGCACCAGGCCGAGCTGCTCGCCTCGCTCGGCGAAGCGGACTGA CGCGGGCGGCGCCGATCGTC
Downstream 100 bases:
>100_bases CCGGCAGGCGAGCCGGCCGGCCAGGCCACGCCCGAGCCGCGCAGAAGCGGCCGGGCGGCGCCATGCGGCCCGCCGGCCGG GCGCCGCGGCCGGTCGGGCA
Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Products: NA
Alternate protein names: M.XfaHemK2P [H]
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MNASPVTAAGLLRASPLDAVDARILLAHVLGWSRTQLITRADAPLEAAAAERFRALEARRSAGEPVAQLVGSREFFGLAF EVTPDVLIPRPETELLVEAALDALDGIAAPAVLDLGTGSGAVALAIAAARPDARVTALDRSAAALAVARRNAARLLDDAR PGGAVSLLASDWYAALGPAARFHAIVSNPPYIARHDPHLDQGDLRFEPRGALTDEADGLAAIRRIVAGAGAFLLPRGELW IEHGYDQAEAVRALLLQAGFREVASLADLASIERTTGGRRPG
Sequences:
>Translated_282_residues MNASPVTAAGLLRASPLDAVDARILLAHVLGWSRTQLITRADAPLEAAAAERFRALEARRSAGEPVAQLVGSREFFGLAF EVTPDVLIPRPETELLVEAALDALDGIAAPAVLDLGTGSGAVALAIAAARPDARVTALDRSAAALAVARRNAARLLDDAR PGGAVSLLASDWYAALGPAARFHAIVSNPPYIARHDPHLDQGDLRFEPRGALTDEADGLAAIRRIVAGAGAFLLPRGELW IEHGYDQAEAVRALLLQAGFREVASLADLASIERTTGGRRPG >Mature_282_residues MNASPVTAAGLLRASPLDAVDARILLAHVLGWSRTQLITRADAPLEAAAAERFRALEARRSAGEPVAQLVGSREFFGLAF EVTPDVLIPRPETELLVEAALDALDGIAAPAVLDLGTGSGAVALAIAAARPDARVTALDRSAAALAVARRNAARLLDDAR PGGAVSLLASDWYAALGPAARFHAIVSNPPYIARHDPHLDQGDLRFEPRGALTDEADGLAAIRRIVAGAGAFLLPRGELW IEHGYDQAEAVRALLLQAGFREVASLADLASIERTTGGRRPG
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=245, Percent_Identity=31.8367346938775, Blast_Score=93, Evalue=3e-19, Organism=Escherichia coli, GI1787463, Length=273, Percent_Identity=44.3223443223443, Blast_Score=201, Evalue=3e-53, Organism=Escherichia coli, GI87082085, Length=202, Percent_Identity=35.1485148514851, Blast_Score=91, Evalue=7e-20, Organism=Drosophila melanogaster, GI24582226, Length=266, Percent_Identity=28.9473684210526, Blast_Score=99, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 29482; Mature: 29482
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASPVTAAGLLRASPLDAVDARILLAHVLGWSRTQLITRADAPLEAAAAERFRALEARR CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHEECCCCCHHHHHHHHHHHHHHHH SAGEPVAQLVGSREFFGLAFEVTPDVLIPRPETELLVEAALDALDGIAAPAVLDLGTGSG CCCCHHHHHHCCCHHEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCC AVALAIAAARPDARVTALDRSAAALAVARRNAARLLDDARPGGAVSLLASDWYAALGPAA CEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCHH RFHAIVSNPPYIARHDPHLDQGDLRFEPRGALTDEADGLAAIRRIVAGAGAFLLPRGELW HHHHEECCCCEEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCEE IEHGYDQAEAVRALLLQAGFREVASLADLASIERTTGGRRPG EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNASPVTAAGLLRASPLDAVDARILLAHVLGWSRTQLITRADAPLEAAAAERFRALEARR CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHEECCCCCHHHHHHHHHHHHHHHH SAGEPVAQLVGSREFFGLAFEVTPDVLIPRPETELLVEAALDALDGIAAPAVLDLGTGSG CCCCHHHHHHCCCHHEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCC AVALAIAAARPDARVTALDRSAAALAVARRNAARLLDDARPGGAVSLLASDWYAALGPAA CEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCHH RFHAIVSNPPYIARHDPHLDQGDLRFEPRGALTDEADGLAAIRRIVAGAGAFLLPRGELW HHHHEECCCCEEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCEE IEHGYDQAEAVRALLLQAGFREVASLADLASIERTTGGRRPG EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]