The gene/protein map for NC_012724 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026059

Identifier: 238026059

GI number: 238026059

Start: 399588

End: 400205

Strand: Reverse

Name: 238026059

Synonym: bglu_1g03870

Alternate gene names: NA

Gene position: 400205-399588 (Counterclockwise)

Preceding gene: 238026069

Following gene: 238026058

Centisome position: 10.24

GC content: 67.31

Gene sequence:

>618_bases
ATGACTCCGTTTCTCTCCCGCTTCGCGCTGCCGCTCGCGGCCTGCGCGCTTCTGGCAGGCTGCGCGGCGGCGGTGCCGCT
GCTCGGTTCGGCAGGCAGCGCCGCGCTGCAGATGGTCGGCATCGGCAAGCCCGATGTGCCCGACGCGCAGAAGCCGCCGC
GCAATCTGGCCGTGACCCTCTACGCCGCGCCGAACCTGAACGCCGCCAACGACAACCGGCCGCTCGCATTAGTAGTAAGG
CTCTACACGCTGAAGGATCCGACCTCGTTCATGCAGGCACCGTTCGACGCGTTCACCGATCCCGCCAAGGAGAAGGCCAC
GCTCGGCGCCGACCTGCTCAGCGTGCGCGAGGTGACGCTGATTCCGGGGCAGCACTACAACGCCACCGAGAAGGTCTCGC
GCGAGGCGCAGGCGTTCGGCGTCGTCGCGCTGTTTCGCTCGCCCGCGCTGCAACGCTGGAAGCTGGCATTCGATCCGGCG
AAATCGGAGAAATCCGGCATAATCATCGGCCTGCACAACTGCGCGATGACGGTGACGGGCGGTAACGTGATCGCGCCGCA
GCAGGGCATGCCGGCGCAGCAGCTCAATATGCTGTCGTCGGTCAGCTGCGGCGGCTGA

Upstream 100 bases:

>100_bases
GGGCAGCTGTTACCGGGGTGTTGGACGCGCCCGCAACATGACCACACACGCTATCCAGGCATTTCTGACAGGAACCGACT
CGCGTCGCCCTCGACCCACG

Downstream 100 bases:

>100_bases
CGGACTCGATGACGATTCAAAGTCAATTTGACCAGTTTGACATTTACGTGACCCGGCGCGCGATAAGCCGGGCTACCACA
TAATCACGTTCGGGATGTGA

Product: putative type VI secretion system protein TssJ

Products: NA

Alternate protein names: Type VI Secretion Lipoprotein; Lipoprotein

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTPFLSRFALPLAACALLAGCAAAVPLLGSAGSAALQMVGIGKPDVPDAQKPPRNLAVTLYAAPNLNAANDNRPLALVVR
LYTLKDPTSFMQAPFDAFTDPAKEKATLGADLLSVREVTLIPGQHYNATEKVSREAQAFGVVALFRSPALQRWKLAFDPA
KSEKSGIIIGLHNCAMTVTGGNVIAPQQGMPAQQLNMLSSVSCGG

Sequences:

>Translated_205_residues
MTPFLSRFALPLAACALLAGCAAAVPLLGSAGSAALQMVGIGKPDVPDAQKPPRNLAVTLYAAPNLNAANDNRPLALVVR
LYTLKDPTSFMQAPFDAFTDPAKEKATLGADLLSVREVTLIPGQHYNATEKVSREAQAFGVVALFRSPALQRWKLAFDPA
KSEKSGIIIGLHNCAMTVTGGNVIAPQQGMPAQQLNMLSSVSCGG
>Mature_204_residues
TPFLSRFALPLAACALLAGCAAAVPLLGSAGSAALQMVGIGKPDVPDAQKPPRNLAVTLYAAPNLNAANDNRPLALVVRL
YTLKDPTSFMQAPFDAFTDPAKEKATLGADLLSVREVTLIPGQHYNATEKVSREAQAFGVVALFRSPALQRWKLAFDPAK
SEKSGIIIGLHNCAMTVTGGNVIAPQQGMPAQQLNMLSSVSCGG

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21427; Mature: 21296

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFLSRFALPLAACALLAGCAAAVPLLGSAGSAALQMVGIGKPDVPDAQKPPRNLAVTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
YAAPNLNAANDNRPLALVVRLYTLKDPTSFMQAPFDAFTDPAKEKATLGADLLSVREVTL
EECCCCCCCCCCCCEEEEEEEECCCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHEEEEE
IPGQHYNATEKVSREAQAFGVVALFRSPALQRWKLAFDPAKSEKSGIIIGLHNCAMTVTG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCEEEEEECEEEEECC
GNVIAPQQGMPAQQLNMLSSVSCGG
CCEECCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
TPFLSRFALPLAACALLAGCAAAVPLLGSAGSAALQMVGIGKPDVPDAQKPPRNLAVTL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
YAAPNLNAANDNRPLALVVRLYTLKDPTSFMQAPFDAFTDPAKEKATLGADLLSVREVTL
EECCCCCCCCCCCCEEEEEEEECCCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHEEEEE
IPGQHYNATEKVSREAQAFGVVALFRSPALQRWKLAFDPAKSEKSGIIIGLHNCAMTVTG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCEEEEEECEEEEECC
GNVIAPQQGMPAQQLNMLSSVSCGG
CCEECCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA