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The map label for this gene is ompA [H]

Identifier: 238026069

GI number: 238026069

Start: 411501

End: 412568

Strand: Reverse

Name: ompA [H]

Synonym: bglu_1g03970

Alternate gene names: 238026069

Gene position: 412568-411501 (Counterclockwise)

Preceding gene: 238026070

Following gene: 238026059

Centisome position: 10.56

GC content: 74.25

Gene sequence:

>1068_bases
ATGACGACCTCCGTGCTCCCGCCGCGCCGCCGCCAGCTGGCCGCCGCGCTCGCCGCCGGCGCCGCGCTCTGCGCGGGCGG
CCTGGCCCTGCTCGCCGCGCCCGCCGGCGCATTCGCCGACAATGCCGGCCCCGCCACCGTGACGCGCGTCGACCCGAGCG
GGGCGGCGGTGCGCAGCACCGCGCTCCCGCCGTCGGGCGCACCGGCGCAGGGGCCGTCGGGCGGACTCAGCGCGCCGCCG
CAGGCCGAGGGCGGCACCAGCCAGAACGGCACCGTGCTGACCGGCACCAACGTCGCCGGCGGCACGGGCGCCGGCCCGGT
GACGGGCGCCGGCACCGGCGCGACCGTGTCGGTGCCGCCGCAGGCCAGCGCCACGCCGGGCCAGGTGGTGGTGGGCGGCA
AGGTGCCCGACGAGGCCACCAAGGCGGCCGTGCTGCAGAAGCTGCGCGACACCTACGGCGCCGGCAACGTGGTCGACCAG
ATCGAGGTGGGCGACGTGGCCACGCCGCCAAACTGGAGCAGCAACGTGCAGAAGCTGATCGGCCCGCAGCTCAAGCAGAT
CAGCAAGGGGCAGCTGCGCATCGACGGCACCTCGATCGACGTGAAGGGCGAGGTGCGCAACGAGGCGCTGCGCCAGCAGG
TGGCCAGCGACATGGCGAACCAGCTGAACCCGACCTATACGATCCGCAACGCGCTGCGCGTGAGCGCCTCCGAGCAGGGC
CTGCTCGACCAGACGCTCGCCAACCGCACGATCGAGTTCGAGACCGGCAGCGCCACGCTCACCCCGCAGGGCCGCGCGAT
CCTCGACCAGATGGCCGCCGCGATGAGCCGGATGGCGAACCGCTCGGTCGCGATCATCGGCCATACCGACAACTCGGGCA
ATCGTGCCTCGAACATCGCGCTGAGCCAGGCGCGCGCCGATGCCGTGAAGGGCTACCTGGTGGCCAAGGGAATCCCGTCG
CAGCAGCTGTCGACCACGGGCGTCGGCCCCGACCAGCCGATCGCCTCGAACGACACCGCCGAGGGGCGCGCGCGCAACCG
GCGCATCGAGTTCCGCGCGGGACAGTAG

Upstream 100 bases:

>100_bases
GCGACCAGCAAACTCGTCAGCTACCTCGAACAACCGCAACTGTCGCTGCGCGTGGCGATCGACACGTTCCGCGAAGCCTT
CGTCGCAGGAGCCTGACGCC

Downstream 100 bases:

>100_bases
GCGCGGCCGGCAGCCACGCGGGCAGCCGAGGACGGCGCCGCCGGGCGGCAGGCCCGCGGCGCCGTCTTCATTAGCGGCGC
CGCCCGGCGCGCCTCAAGCG

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MTTSVLPPRRRQLAAALAAGAALCAGGLALLAAPAGAFADNAGPATVTRVDPSGAAVRSTALPPSGAPAQGPSGGLSAPP
QAEGGTSQNGTVLTGTNVAGGTGAGPVTGAGTGATVSVPPQASATPGQVVVGGKVPDEATKAAVLQKLRDTYGAGNVVDQ
IEVGDVATPPNWSSNVQKLIGPQLKQISKGQLRIDGTSIDVKGEVRNEALRQQVASDMANQLNPTYTIRNALRVSASEQG
LLDQTLANRTIEFETGSATLTPQGRAILDQMAAAMSRMANRSVAIIGHTDNSGNRASNIALSQARADAVKGYLVAKGIPS
QQLSTTGVGPDQPIASNDTAEGRARNRRIEFRAGQ

Sequences:

>Translated_355_residues
MTTSVLPPRRRQLAAALAAGAALCAGGLALLAAPAGAFADNAGPATVTRVDPSGAAVRSTALPPSGAPAQGPSGGLSAPP
QAEGGTSQNGTVLTGTNVAGGTGAGPVTGAGTGATVSVPPQASATPGQVVVGGKVPDEATKAAVLQKLRDTYGAGNVVDQ
IEVGDVATPPNWSSNVQKLIGPQLKQISKGQLRIDGTSIDVKGEVRNEALRQQVASDMANQLNPTYTIRNALRVSASEQG
LLDQTLANRTIEFETGSATLTPQGRAILDQMAAAMSRMANRSVAIIGHTDNSGNRASNIALSQARADAVKGYLVAKGIPS
QQLSTTGVGPDQPIASNDTAEGRARNRRIEFRAGQ
>Mature_354_residues
TTSVLPPRRRQLAAALAAGAALCAGGLALLAAPAGAFADNAGPATVTRVDPSGAAVRSTALPPSGAPAQGPSGGLSAPPQ
AEGGTSQNGTVLTGTNVAGGTGAGPVTGAGTGATVSVPPQASATPGQVVVGGKVPDEATKAAVLQKLRDTYGAGNVVDQI
EVGDVATPPNWSSNVQKLIGPQLKQISKGQLRIDGTSIDVKGEVRNEALRQQVASDMANQLNPTYTIRNALRVSASEQGL
LDQTLANRTIEFETGSATLTPQGRAILDQMAAAMSRMANRSVAIIGHTDNSGNRASNIALSQARADAVKGYLVAKGIPSQ
QLSTTGVGPDQPIASNDTAEGRARNRRIEFRAGQ

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=129, Percent_Identity=38.7596899224806, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1787191, Length=113, Percent_Identity=36.283185840708, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788957, Length=100, Percent_Identity=38, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 35744; Mature: 35613

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS51123 OMPA_2 ; PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSVLPPRRRQLAAALAAGAALCAGGLALLAAPAGAFADNAGPATVTRVDPSGAAVRST
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEC
ALPPSGAPAQGPSGGLSAPPQAEGGTSQNGTVLTGTNVAGGTGAGPVTGAGTGATVSVPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCC
QASATPGQVVVGGKVPDEATKAAVLQKLRDTYGAGNVVDQIEVGDVATPPNWSSNVQKLI
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHH
GPQLKQISKGQLRIDGTSIDVKGEVRNEALRQQVASDMANQLNPTYTIRNALRVSASEQG
CHHHHHHCCCEEEECCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCC
LLDQTLANRTIEFETGSATLTPQGRAILDQMAAAMSRMANRSVAIIGHTDNSGNRASNIA
HHHHHHHCCEEEEECCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
LSQARADAVKGYLVAKGIPSQQLSTTGVGPDQPIASNDTAEGRARNRRIEFRAGQ
HHHHHHHHHHCEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCC
>Mature Secondary Structure 
TTSVLPPRRRQLAAALAAGAALCAGGLALLAAPAGAFADNAGPATVTRVDPSGAAVRST
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEC
ALPPSGAPAQGPSGGLSAPPQAEGGTSQNGTVLTGTNVAGGTGAGPVTGAGTGATVSVPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCC
QASATPGQVVVGGKVPDEATKAAVLQKLRDTYGAGNVVDQIEVGDVATPPNWSSNVQKLI
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHH
GPQLKQISKGQLRIDGTSIDVKGEVRNEALRQQVASDMANQLNPTYTIRNALRVSASEQG
CHHHHHHCCCEEEECCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCC
LLDQTLANRTIEFETGSATLTPQGRAILDQMAAAMSRMANRSVAIIGHTDNSGNRASNIA
HHHHHHHCCEEEEECCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
LSQARADAVKGYLVAKGIPSQQLSTTGVGPDQPIASNDTAEGRARNRRIEFRAGQ
HHHHHHHHHHCEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]