| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026026
Identifier: 238026026
GI number: 238026026
Start: 367058
End: 367939
Strand: Direct
Name: 238026026
Synonym: bglu_1g03530
Alternate gene names: NA
Gene position: 367058-367939 (Clockwise)
Preceding gene: 238026025
Following gene: 238026027
Centisome position: 9.4
GC content: 48.3
Gene sequence:
>882_bases ATGTCATCGATCATTCAACTCACGCTTGACGGATCGCTTGTTCGCGATCAACACCAAGTTTCCTTGCGGGTCCTCGGTCG ATCGATGGTGTCGATCCAGGCAGCAGTCGATAGAGCCTATCTTGACGTCAAGTATGGCCACGTCTGGAAGCACGCTCGGT TGCCAATCGCCTTCTATGAAGACGCAGACTTCATCGTCGGCGACCCGGAAGAAGGAAGTTACGTCCTAAAATTCCTCTCG GACCAAGGGGAGGCAATTGTCAAGCGATTGCGTGAAGCAATTTCCGACCCTTATCGAAAGGCCGTGGAAGGTGGGGAGCA GGAGATATTTGCGATCAATCGACAGATTGAGGCGCGCAAGAATCAAGTTGAAAATAAGATCATCGTCCCTCAGAGTTTTC AGCAGTTTATCGCCCAGCCGGATCAGTTAGTAACGCGAGCATATGGTGATAAATCTATCAACAAAAATATCGACCAAATG CTTAGTCCGGTTAGAAAGGGGGATGGGGCAATTCTTAAGCTGGCGTTGAAGCCGAGCTACCGTGAACGCACTGAGACATT TGTGTTCACAAAGGCTGAGGCGCTTGCATTTAAAACGGTAATTGGACAGCGCCAGCTTGGAAATCCTGTGGTTTATCGTG GTAAGTTGCGCGCGCTAGACCGAGGCCATAACCAAAAAACCAATTTCCGTGGCAAATTCATTAATGCCGAGAATGATCGG GATATGTTCATTTTCATACAAAGCGAAGAGGATTATTCGGCATTGGTTCCATACATGGATCGCGATGATTTTACGATCGT CGCATGCCCGATTGTCGAATATGAATCGTTTGATCCTATGGCGGGCGATATCCAATTTGTGAAGATACTTGGCGATGGCT GA
Upstream 100 bases:
>100_bases GGACCAACAATGGCAGGTCAGACATTTTGACCGCCGCGCTCACTGATCCTCGGGGCTAATGTGATCGATCGCGGCGATAA CTCTATAAAACGAAGAAACA
Downstream 100 bases:
>100_bases TGGCGCGCTTGACAAAATCAAGGAGCAATGCCTTGAATTGGTGTTAAACATTATTCCAATGAGTCAGCTTGGATTTGTGT TTGTGACCGCAGTCGTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSSIIQLTLDGSLVRDQHQVSLRVLGRSMVSIQAAVDRAYLDVKYGHVWKHARLPIAFYEDADFIVGDPEEGSYVLKFLS DQGEAIVKRLREAISDPYRKAVEGGEQEIFAINRQIEARKNQVENKIIVPQSFQQFIAQPDQLVTRAYGDKSINKNIDQM LSPVRKGDGAILKLALKPSYRERTETFVFTKAEALAFKTVIGQRQLGNPVVYRGKLRALDRGHNQKTNFRGKFINAENDR DMFIFIQSEEDYSALVPYMDRDDFTIVACPIVEYESFDPMAGDIQFVKILGDG
Sequences:
>Translated_293_residues MSSIIQLTLDGSLVRDQHQVSLRVLGRSMVSIQAAVDRAYLDVKYGHVWKHARLPIAFYEDADFIVGDPEEGSYVLKFLS DQGEAIVKRLREAISDPYRKAVEGGEQEIFAINRQIEARKNQVENKIIVPQSFQQFIAQPDQLVTRAYGDKSINKNIDQM LSPVRKGDGAILKLALKPSYRERTETFVFTKAEALAFKTVIGQRQLGNPVVYRGKLRALDRGHNQKTNFRGKFINAENDR DMFIFIQSEEDYSALVPYMDRDDFTIVACPIVEYESFDPMAGDIQFVKILGDG >Mature_292_residues SSIIQLTLDGSLVRDQHQVSLRVLGRSMVSIQAAVDRAYLDVKYGHVWKHARLPIAFYEDADFIVGDPEEGSYVLKFLSD QGEAIVKRLREAISDPYRKAVEGGEQEIFAINRQIEARKNQVENKIIVPQSFQQFIAQPDQLVTRAYGDKSINKNIDQML SPVRKGDGAILKLALKPSYRERTETFVFTKAEALAFKTVIGQRQLGNPVVYRGKLRALDRGHNQKTNFRGKFINAENDRD MFIFIQSEEDYSALVPYMDRDDFTIVACPIVEYESFDPMAGDIQFVKILGDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33288; Mature: 33157
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIIQLTLDGSLVRDQHQVSLRVLGRSMVSIQAAVDRAYLDVKYGHVWKHARLPIAFYE CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEECCCCCCEEEEC DADFIVGDPEEGSYVLKFLSDQGEAIVKRLREAISDPYRKAVEGGEQEIFAINRQIEARK CCCEEEECCCCCCEEEEEHHCCCHHHHHHHHHHHCCHHHHHHCCCCCEEEEEHHHHHHHH NQVENKIIVPQSFQQFIAQPDQLVTRAYGDKSINKNIDQMLSPVRKGDGAILKLALKPSY HHCCCEEECCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCC RERTETFVFTKAEALAFKTVIGQRQLGNPVVYRGKLRALDRGHNQKTNFRGKFINAENDR HHHCCEEEEEHHHHHHHHHHHHHHHCCCCEEEECEEHHHHCCCCCCCCCCEEEECCCCCC DMFIFIQSEEDYSALVPYMDRDDFTIVACPIVEYESFDPMAGDIQFVKILGDG EEEEEEECCCCCHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCC >Mature Secondary Structure SSIIQLTLDGSLVRDQHQVSLRVLGRSMVSIQAAVDRAYLDVKYGHVWKHARLPIAFYE CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEECCCCCCEEEEC DADFIVGDPEEGSYVLKFLSDQGEAIVKRLREAISDPYRKAVEGGEQEIFAINRQIEARK CCCEEEECCCCCCEEEEEHHCCCHHHHHHHHHHHCCHHHHHHCCCCCEEEEEHHHHHHHH NQVENKIIVPQSFQQFIAQPDQLVTRAYGDKSINKNIDQMLSPVRKGDGAILKLALKPSY HHCCCEEECCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCC RERTETFVFTKAEALAFKTVIGQRQLGNPVVYRGKLRALDRGHNQKTNFRGKFINAENDR HHHCCEEEEEHHHHHHHHHHHHHHHCCCCEEEECEEHHHHCCCCCCCCCCEEEECCCCCC DMFIFIQSEEDYSALVPYMDRDDFTIVACPIVEYESFDPMAGDIQFVKILGDG EEEEEEECCCCCHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA