| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is yrbA [C]
Identifier: 238026002
GI number: 238026002
Start: 348169
End: 348408
Strand: Direct
Name: yrbA [C]
Synonym: bglu_1g03280
Alternate gene names: 238026002
Gene position: 348169-348408 (Clockwise)
Preceding gene: 238026001
Following gene: 238026003
Centisome position: 8.91
GC content: 60.42
Gene sequence:
>240_bases ATGTTGCCGACTCCCGAACAGGTCAAGCAATACATCGCGGGCGGGCTCGCCTGCACCCATCTGGAAGTCGAGGGCGACGG CCAGCATTTCTTCGCGACCATCGTCTCGGAGCAATTTGAAGGCAAGCGTCCGATCCAGCGCCATCAGCTCGTCTATGCGG CGCTCGGCGACCGCATGAAGCAGGAAATCCACGCGCTCAGCATGAAAACGCTGACGCCCGCCGAATGGCAGAACGCATAA
Upstream 100 bases:
>100_bases TCGTCGCCGGTTTCTTCGTGCTGCTCGCGCTGGTCGCGATGCGGCTGCTGGCCACCGGCTACAAGCTGCGTCACTGAACG CACCGACTGGAGCATTTCTC
Downstream 100 bases:
>100_bases AGAACGGACATCCTTCGTGCAAGTTTCAGTCAACGAACGCGACGCGGTAAGCCACGTCGCGACGGCGAACCCGTCCGCCG GCCGGGTTTCGCAAGGACAG
Product: BolA-like protein
Products: NA
Alternate protein names: BolA-Like Protein; BolA Protein; BolA Family Transcriptional Regulator; BolA/YrbA Family Protein; BolA-Like Cell Cycle Protein; Transcriptional Regulator Transcription Regulator Protein; Bola Family Protein
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MLPTPEQVKQYIAGGLACTHLEVEGDGQHFFATIVSEQFEGKRPIQRHQLVYAALGDRMKQEIHALSMKTLTPAEWQNA
Sequences:
>Translated_79_residues MLPTPEQVKQYIAGGLACTHLEVEGDGQHFFATIVSEQFEGKRPIQRHQLVYAALGDRMKQEIHALSMKTLTPAEWQNA >Mature_79_residues MLPTPEQVKQYIAGGLACTHLEVEGDGQHFFATIVSEQFEGKRPIQRHQLVYAALGDRMKQEIHALSMKTLTPAEWQNA
Specific function: Unknown
COG id: COG5007
COG function: function code K; Predicted transcriptional regulator, BolA superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8892; Mature: 8892
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTPEQVKQYIAGGLACTHLEVEGDGQHFFATIVSEQFEGKRPIQRHQLVYAALGDRMK CCCCHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH QEIHALSMKTLTPAEWQNA HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLPTPEQVKQYIAGGLACTHLEVEGDGQHFFATIVSEQFEGKRPIQRHQLVYAALGDRMK CCCCHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH QEIHALSMKTLTPAEWQNA HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA