| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025999
Identifier: 238025999
GI number: 238025999
Start: 346016
End: 346285
Strand: Direct
Name: 238025999
Synonym: bglu_1g03250
Alternate gene names: NA
Gene position: 346016-346285 (Clockwise)
Preceding gene: 238025998
Following gene: 238026000
Centisome position: 8.86
GC content: 75.93
Gene sequence:
>270_bases GTGAGCCAGTTCGCCACCGGCGCCTCGCTGACCTACGCGAGCGCGAAGGCCGCGCTCGACGACGGGCTCGGCCGCATCGC CGGCGGCGCGACCGCGGTGGACTGCGCGGCGCTCGCGCAGTTCGACTCGGCCGCGCTCGCCGTGCTGCTCGCATGGCAGC GCGCCGCGCGCTCGCGCGGCGCGGCGCTCGCGATCCTGAACCTGCCGCCCACGCTCGCCAGCCTGGCGCGCGCCTACGGC ATCGACTCCCTCCTCGACGAACGACATTGA
Upstream 100 bases:
>100_bases ACCAGCAGCAGTTCAACGAGAAGATCCAGCAGAGCGGCGTGGACGGCCTGATCCAGTTCCTCACGCAGCGCAACGAGCAG CTCGCTGCCGGCAAGGCATC
Downstream 100 bases:
>100_bases CGCTCGCCGCCTGACGCCCGCTACGCCGGGCGCTGCGGACCGCCGCGGCTCTGCCGCGCCGATCCGGCTAGCCGGTTTGC CCTATAATCAACCGTTTTGC
Product: anti-anti-sigma regulatory factor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSQFATGASLTYASAKAALDDGLGRIAGGATAVDCAALAQFDSAALAVLLAWQRAARSRGAALAILNLPPTLASLARAYG IDSLLDERH
Sequences:
>Translated_89_residues MSQFATGASLTYASAKAALDDGLGRIAGGATAVDCAALAQFDSAALAVLLAWQRAARSRGAALAILNLPPTLASLARAYG IDSLLDERH >Mature_88_residues SQFATGASLTYASAKAALDDGLGRIAGGATAVDCAALAQFDSAALAVLLAWQRAARSRGAALAILNLPPTLASLARAYGI DSLLDERH
Specific function: Unknown
COG id: COG3113
COG function: function code R; Predicted NTP binding protein (contains STAS domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9015; Mature: 8884
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFATGASLTYASAKAALDDGLGRIAGGATAVDCAALAQFDSAALAVLLAWQRAARSRG CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AALAILNLPPTLASLARAYGIDSLLDERH CEEEEEECCHHHHHHHHHHCHHHHHCCCC >Mature Secondary Structure SQFATGASLTYASAKAALDDGLGRIAGGATAVDCAALAQFDSAALAVLLAWQRAARSRG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AALAILNLPPTLASLARAYGIDSLLDERH CEEEEEECCHHHHHHHHHHCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA