Click here to switch to the map view.

The map label for this gene is ugpQ [H]

Identifier: 238025984

GI number: 238025984

Start: 326799

End: 327578

Strand: Direct

Name: ugpQ [H]

Synonym: bglu_1g03100

Alternate gene names: 238025984

Gene position: 326799-327578 (Clockwise)

Preceding gene: 238025983

Following gene: 238025986

Centisome position: 8.37

GC content: 74.49

Gene sequence:

>780_bases
ATGAGCGACACCCACGCCCCCATCGGCTGGCCCTATGCCGGCCTCGCCCGGATCGTCGCGCATCGCGGCGGCGGCCGGCT
CGCGCCCGAGAACACGCTGGCGGCGCTCGAGGAGGGCGCGCGGCGCGGGCACCGGATGGTGGAGTTCGACGCCAAGCTGT
CGGCCGACGGCGTGAGCTTCCTGCTGCACGACGACACCGTCGAGCGCACCTCGAACGGGCGCGGCGCGGCCGCGGCCATG
GCTTATCGCGAACTGGCGGCGCTCGACGCCGGCGCCTGGTTCGACGCGCGCTTCGCCGGCGAGCGGATGCCGACGCTCGA
GCAGGCCGCCGCGCGCTGCCTCGCGCTCGGGCTTGCCGCCAATGTCGAGATCAAGCCCTGCCCCGGCCGCGAGGCCGAGA
CGGGCGAGCGCGTCGCGTGCGACGCGGCCCGCCTCTGGCACGACGCGGCGGTGCCGCCGCTGCTGTCGTCGTTTTCGGTG
GCGGCGCTGGCGGCGGCGCGCGCCGCCGCGCCCGCTCTGCCGCGCGGGCTGCTGGTCGAGACGCTGCCTGCCGACTGGCG
CGCGCTCACGGCCGAACTGGGCTGCGTTTCGCTGCACGCGAGCCATCTCGCGCTAGACGCGGCGAGCGTCGCCGCAATCC
GGGCAGCCGGATTGCATGTGCTGGCCTACACCGTCAACGAGCCCGCGCGCGCGAGCGAGCTGCTCGACTGGGGCGTGGAC
CTGATCTGCACCGACCGGATCGACTCGATCGGGCCGCAGTTTGCCAAGTCCGGAGAATAA

Upstream 100 bases:

>100_bases
TTCGATCCCGTCACGGGCCGGCGCGCGAACTGAGCCGCATCGGCCGAATCATTTTCCCGCCGCGCCGGCGATGCGGCGGG
GCCATCAGGAGAACGCCGCG

Downstream 100 bases:

>100_bases
AGTCGCGGATTTGCCGCGATGATGGAAGTGAATCTGCTCCGGCCCTCAGGGGCCGGAGCATGATTGCTTTCCGTTTTCGT
AACTTCAGGAAAAAATCGCT

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSDTHAPIGWPYAGLARIVAHRGGGRLAPENTLAALEEGARRGHRMVEFDAKLSADGVSFLLHDDTVERTSNGRGAAAAM
AYRELAALDAGAWFDARFAGERMPTLEQAAARCLALGLAANVEIKPCPGREAETGERVACDAARLWHDAAVPPLLSSFSV
AALAAARAAAPALPRGLLVETLPADWRALTAELGCVSLHASHLALDAASVAAIRAAGLHVLAYTVNEPARASELLDWGVD
LICTDRIDSIGPQFAKSGE

Sequences:

>Translated_259_residues
MSDTHAPIGWPYAGLARIVAHRGGGRLAPENTLAALEEGARRGHRMVEFDAKLSADGVSFLLHDDTVERTSNGRGAAAAM
AYRELAALDAGAWFDARFAGERMPTLEQAAARCLALGLAANVEIKPCPGREAETGERVACDAARLWHDAAVPPLLSSFSV
AALAAARAAAPALPRGLLVETLPADWRALTAELGCVSLHASHLALDAASVAAIRAAGLHVLAYTVNEPARASELLDWGVD
LICTDRIDSIGPQFAKSGE
>Mature_258_residues
SDTHAPIGWPYAGLARIVAHRGGGRLAPENTLAALEEGARRGHRMVEFDAKLSADGVSFLLHDDTVERTSNGRGAAAAMA
YRELAALDAGAWFDARFAGERMPTLEQAAARCLALGLAANVEIKPCPGREAETGERVACDAARLWHDAAVPPLLSSFSVA
ALAAARAAAPALPRGLLVETLPADWRALTAELGCVSLHASHLALDAASVAAIRAAGLHVLAYTVNEPARASELLDWGVDL
ICTDRIDSIGPQFAKSGE

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=235, Percent_Identity=27.2340425531915, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI284055245, Length=88, Percent_Identity=39.7727272727273, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI284055240, Length=88, Percent_Identity=39.7727272727273, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI284055242, Length=88, Percent_Identity=39.7727272727273, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI21361649, Length=88, Percent_Identity=39.7727272727273, Blast_Score=68, Evalue=9e-12,
Organism=Escherichia coli, GI1789858, Length=247, Percent_Identity=57.085020242915, Blast_Score=284, Evalue=4e-78,
Organism=Caenorhabditis elegans, GI17561436, Length=161, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 27101; Mature: 26970

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTHAPIGWPYAGLARIVAHRGGGRLAPENTLAALEEGARRGHRMVEFDAKLSADGVSF
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCEECCCCEEE
LLHDDTVERTSNGRGAAAAMAYRELAALDAGAWFDARFAGERMPTLEQAAARCLALGLAA
EEECCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHC
NVEIKPCPGREAETGERVACDAARLWHDAAVPPLLSSFSVAALAAARAAAPALPRGLLVE
CCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEC
TLPADWRALTAELGCVSLHASHLALDAASVAAIRAAGLHVLAYTVNEPARASELLDWGVD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCC
LICTDRIDSIGPQFAKSGE
EEECCCHHHCCCHHHCCCC
>Mature Secondary Structure 
SDTHAPIGWPYAGLARIVAHRGGGRLAPENTLAALEEGARRGHRMVEFDAKLSADGVSF
CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCEECCCCEEE
LLHDDTVERTSNGRGAAAAMAYRELAALDAGAWFDARFAGERMPTLEQAAARCLALGLAA
EEECCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHC
NVEIKPCPGREAETGERVACDAARLWHDAAVPPLLSSFSVAALAAARAAAPALPRGLLVE
CCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEC
TLPADWRALTAELGCVSLHASHLALDAASVAAIRAAGLHVLAYTVNEPARASELLDWGVD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCC
LICTDRIDSIGPQFAKSGE
EEECCCHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]