| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025986
Identifier: 238025986
GI number: 238025986
Start: 328648
End: 329376
Strand: Direct
Name: 238025986
Synonym: bglu_1g03120
Alternate gene names: NA
Gene position: 328648-329376 (Clockwise)
Preceding gene: 238025984
Following gene: 238025987
Centisome position: 8.41
GC content: 66.53
Gene sequence:
>729_bases ATGGCACGGCTAGCACGACTCTATGTTCCCGATCAGCCGCAGCACGTCATTCTGCGCGGTCTGGATCAGCAACCGGCGTT CGTCGATGACCAGGATTACGAGCTTTTCATCGATTGCCTGAAGGCGGCGGCGCGCGATCATCAACTGGCAGTGCATGCCT ACGTGCTGCTGCCCCGACAGGTTCAACTGCTCGTCACGCCAAGCGACGAGGCGAGCCTGCCGAAGGCGATGCAGGCGGTC GGCCGGCGCTACGTCGCTCACTTCAACCGGCGCTACTCGCGGCGCGGCACGCTCTGGGAAGGGCGCTACCGCGCCACCGT GATCGAGGGCGAACGCTACTTCCTGCTGGCGAGCCGGGTGGTGGAGCTGAGCCCGGTGCGTGCCCAGCTGGCCCAGACGG CCGAGGGCTATCGCTGGTCGAGCTATCGCCACCACATCGGCCTGACCGTCGACAGCCTGATTACCGATCACCCGCTCTAC TGGGCGCTCGGCAACACGCCGTTCGAACGGCAGCGCGCCTACAAGGAACTCTGCGAGCAGCCGCTCGACGAGCGCCAGAC CGAGCAGTTGCAGCAGGCCACGCTCAAGGGCTGGGTGCTCGGCGGCGAAACCTACCGCGAGTGGGCGGCGCGCACCGCCA ATCGCCGCGTTTCGCCGCTACCGCGCGGACGGCCGCGTAAGGTACGTGAAAACAACGGCCCGCACAACCCGCCCGCGCAT CAGCAATAA
Upstream 100 bases:
>100_bases CGCACATTCGTGCGAATCCTCCCTGCCGCGCGGGGCTCTGCGCGGATGCAGTCATTCGGGCCTTCGGGTATTTCCTAACG CGATCAAACGGACATTCAGC
Downstream 100 bases:
>100_bases CGGCGGCGCGCCCGGCGGCATCCTCGGATGCCGCTTTTTTTGCACCTTTTCGATACGTCCCCAATAAAAAGGCACCAAAT GGAAACATTCGTTAAATAGG
Product: putative transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative; Methionine-R-Sulfoxide Reductase; Transposase Domain-Containing Protein
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHQLAVHAYVLLPRQVQLLVTPSDEASLPKAMQAV GRRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRVVELSPVRAQLAQTAEGYRWSSYRHHIGLTVDSLITDHPLY WALGNTPFERQRAYKELCEQPLDERQTEQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENNGPHNPPAH QQ
Sequences:
>Translated_242_residues MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHQLAVHAYVLLPRQVQLLVTPSDEASLPKAMQAV GRRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRVVELSPVRAQLAQTAEGYRWSSYRHHIGLTVDSLITDHPLY WALGNTPFERQRAYKELCEQPLDERQTEQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENNGPHNPPAH QQ >Mature_241_residues ARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHQLAVHAYVLLPRQVQLLVTPSDEASLPKAMQAVG RRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRVVELSPVRAQLAQTAEGYRWSSYRHHIGLTVDSLITDHPLYW ALGNTPFERQRAYKELCEQPLDERQTEQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENNGPHNPPAHQ Q
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28042; Mature: 27911
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHQLAVHAYVLLPRQ CCCCEEECCCCCCHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCE VQLLVTPSDEASLPKAMQAVGRRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRV EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCEEEEEEHHH VELSPVRAQLAQTAEGYRWSSYRHHIGLTVDSLITDHPLYWALGNTPFERQRAYKELCEQ HHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC PLDERQTEQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENNGPHNPPAH CCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC QQ CC >Mature Secondary Structure ARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHQLAVHAYVLLPRQ CCCEEECCCCCCHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCE VQLLVTPSDEASLPKAMQAVGRRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRV EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCEEEEEEHHH VELSPVRAQLAQTAEGYRWSSYRHHIGLTVDSLITDHPLYWALGNTPFERQRAYKELCEQ HHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC PLDERQTEQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENNGPHNPPAH CCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC QQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA