| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025975
Identifier: 238025975
GI number: 238025975
Start: 316449
End: 317384
Strand: Direct
Name: 238025975
Synonym: bglu_1g03010
Alternate gene names: NA
Gene position: 316449-317384 (Clockwise)
Preceding gene: 238025974
Following gene: 238025976
Centisome position: 8.1
GC content: 78.74
Gene sequence:
>936_bases ATGACGATGTTGCGCATCCCGGCCTACCACGGCGCCACGAAGCTGGTGGTGCTCGGCTGCGTGGCGGGCGCCGTCGGTGT CGTGCTGCGCGCCGCCGGCGACGAGCGCGACTTGAGCGGGCTCGGCCAGGCTCGGCGGCGGCTTGATGCGGCCATCTCGG CGCGCGGCCAGGCCGAGCGGCGCTTGCGCGCGGGGCGGCCCGGGCAGGCCGCCCCGCGAACGGCGCCGGCCCGTGCGCGG GCAGCGGCGCTGCCGCATGAAGCGCCGCTGCCCGCCCCGCGAGCGGCGGCATCGGCGGCACCGATCGCCGCTGCGGCGCG CGGGTCGCGGCCGCCGTTCGTGGCTTCCCAGCCGTCGCGGCACGACGGTCCGTTCGTTCGCGACGCGGTGTGGTTGCTTG CCATCGCCGCGCACGAGAGTGGCCTGCGGATCGGTCGCCTCGGTCCCGCGCCGGCCGAGCACGGCAAGCACGGCGCGGCC GCCGGGCGGCGTTACGACCTCGCCGGCACCGGCAGCTTCGGCGAGGTCGCGCGCTGGCTCCGTGCGCTCGCGCGCGAGCC GGCGACGTTCGCGCCGCTCAGCCTCGAAGTCACGCGGCGCGGCGGTGGTGCCGTGTTTTCGGCGCGCTTCTCGGTCCATG ACGGCGGAGGGCGGCCTGCGGCGGGCAGCGGCCTGGCGCCGGCCGCGCTGCCGGCGGCCGACGCGTTCGAGTTCGGCGGC GCCGAGGCGGTCGCCATGCCGCGTGTCGCCGGCATCCTGCGCGACGCGCGCGGCGGCCTCGCGCTGCTCGACGCCGGCGG GCGGGCGCGGTCGGCGGCGGTCGGCGAGCGGATCGGCGCCGAGCGGATCACGCGCATCGCGGCCGACGGCGTCTGGCTCG AAGCCGACGACGGCCGCGAGCAGCGCGTGGCTCTGGGCGCGGAGACGATCCGATGA
Upstream 100 bases:
>100_bases CGCACGGCGGCCAGCGGCCGCCGGCCGTGGTGAGCCGTGGCGGCGCCAGCGGCGGGGAGCGAGGCTGATGGCGGACTGCA AACGGCGCGGCGGTAGCCGC
Downstream 100 bases:
>100_bases GCCGCCTGGCCGGCCTGATGGTGCGGATGATGGCCGTGGCGGGACTCGTGGTCGCCGCCGAAGCGGCGGCGCCGGCGAGC CTGCCGCCGCTGCCGGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTMLRIPAYHGATKLVVLGCVAGAVGVVLRAAGDERDLSGLGQARRRLDAAISARGQAERRLRAGRPGQAAPRTAPARAR AAALPHEAPLPAPRAAASAAPIAAAARGSRPPFVASQPSRHDGPFVRDAVWLLAIAAHESGLRIGRLGPAPAEHGKHGAA AGRRYDLAGTGSFGEVARWLRALAREPATFAPLSLEVTRRGGGAVFSARFSVHDGGGRPAAGSGLAPAALPAADAFEFGG AEAVAMPRVAGILRDARGGLALLDAGGRARSAAVGERIGAERITRIAADGVWLEADDGREQRVALGAETIR
Sequences:
>Translated_311_residues MTMLRIPAYHGATKLVVLGCVAGAVGVVLRAAGDERDLSGLGQARRRLDAAISARGQAERRLRAGRPGQAAPRTAPARAR AAALPHEAPLPAPRAAASAAPIAAAARGSRPPFVASQPSRHDGPFVRDAVWLLAIAAHESGLRIGRLGPAPAEHGKHGAA AGRRYDLAGTGSFGEVARWLRALAREPATFAPLSLEVTRRGGGAVFSARFSVHDGGGRPAAGSGLAPAALPAADAFEFGG AEAVAMPRVAGILRDARGGLALLDAGGRARSAAVGERIGAERITRIAADGVWLEADDGREQRVALGAETIR >Mature_310_residues TMLRIPAYHGATKLVVLGCVAGAVGVVLRAAGDERDLSGLGQARRRLDAAISARGQAERRLRAGRPGQAAPRTAPARARA AALPHEAPLPAPRAAASAAPIAAAARGSRPPFVASQPSRHDGPFVRDAVWLLAIAAHESGLRIGRLGPAPAEHGKHGAAA GRRYDLAGTGSFGEVARWLRALAREPATFAPLSLEVTRRGGGAVFSARFSVHDGGGRPAAGSGLAPAALPAADAFEFGGA EAVAMPRVAGILRDARGGLALLDAGGRARSAAVGERIGAERITRIAADGVWLEADDGREQRVALGAETIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31750; Mature: 31619
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMLRIPAYHGATKLVVLGCVAGAVGVVLRAAGDERDLSGLGQARRRLDAAISARGQAER CCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH RLRAGRPGQAAPRTAPARARAAALPHEAPLPAPRAAASAAPIAAAARGSRPPFVASQPSR HHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHCCCCCCCCCCCCCC HDGPFVRDAVWLLAIAAHESGLRIGRLGPAPAEHGKHGAAAGRRYDLAGTGSFGEVARWL CCCCHHHHHHHHHHHHHCCCCCEECCCCCCCHHCCCCCCCCCCEEECCCCCCHHHHHHHH RALAREPATFAPLSLEVTRRGGGAVFSARFSVHDGGGRPAAGSGLAPAALPAADAFEFGG HHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCC AEAVAMPRVAGILRDARGGLALLDAGGRARSAAVGERIGAERITRIAADGVWLEADDGRE CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC QRVALGAETIR CEEECCHHHCC >Mature Secondary Structure TMLRIPAYHGATKLVVLGCVAGAVGVVLRAAGDERDLSGLGQARRRLDAAISARGQAER CEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH RLRAGRPGQAAPRTAPARARAAALPHEAPLPAPRAAASAAPIAAAARGSRPPFVASQPSR HHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHCCCCCCCCCCCCCC HDGPFVRDAVWLLAIAAHESGLRIGRLGPAPAEHGKHGAAAGRRYDLAGTGSFGEVARWL CCCCHHHHHHHHHHHHHCCCCCEECCCCCCCHHCCCCCCCCCCEEECCCCCCHHHHHHHH RALAREPATFAPLSLEVTRRGGGAVFSARFSVHDGGGRPAAGSGLAPAALPAADAFEFGG HHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCC AEAVAMPRVAGILRDARGGLALLDAGGRARSAAVGERIGAERITRIAADGVWLEADDGRE CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC QRVALGAETIR CEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA