| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025974
Identifier: 238025974
GI number: 238025974
Start: 315730
End: 316416
Strand: Direct
Name: 238025974
Synonym: bglu_1g03000
Alternate gene names: NA
Gene position: 315730-316416 (Clockwise)
Preceding gene: 238025973
Following gene: 238025975
Centisome position: 8.08
GC content: 79.48
Gene sequence:
>687_bases ATGAGCGCGCGACGGCGGCTCGCGGTGGTGCCGCCGCGCGCGGTGATGCGAGACCCGGCGCGGTGCCGCGCCTGGCTGGG CGGCTTCAATCTGATGCCGTACCGGCAGCGCGAGGCTCGGCTGCGGCGCCGGCGGCGCGCCGCCGAATTCGCGGGCGCGG CCTGCGTCGGTCTGGCGGCGGCGGCGCTCTCGTGCGCCGGGCAGGTACGCGAGCGCATGCGGCTCGACACGCGGCGCATG GCCATCGAGCAGCAGCTGGCGCAGTGGGCGCCGCAACTGCGTGCCGCCGATGCGGCGGCGCGCGAGTCAGCCGCGCGACG CCGGCACGAGACGGTGGCGGCCGAGCAGGCGCGGCCGCTGGCGCGGGCGGTGGCGCTGTTCGATGCGCTGCGCGCGCTCG ACTACCGCGCGGTGAGGCTGCTCGGGCTGCGGCAGGCGGACGGCGGCGCGCGGCTCGATGCGCAGGCGCGCGGTCCGCTC GCCGCGGCGCGCTGGGTCGAGCGGCTGCGCGAGACGCGGGCCGACTGGCGGGTCGAGGTGGCAGGCATCGACGCGGGCGA GCGCGAGCCGGCCACGGGCGGTTCGCGCGCGATCCGCTTCGTGGTACGGGTTCGCTGGCCGCACGGCGGCCAGCGGCCGC CGGCCGTGGTGAGCCGTGGCGGCGCCAGCGGCGGGGAGCGAGGCTGA
Upstream 100 bases:
>100_bases AATGCGCGGCGTATTGCCGGCGGCCCGGGATCGATGCGGCGGCGTGCCATTCGCCGCGCTTCGCGGTGGCGTTCGGGCTC GGCCTGCGCGGGGTGTGCGA
Downstream 100 bases:
>100_bases TGGCGGACTGCAAACGGCGCGGCGGTAGCCGCATGACGATGTTGCGCATCCCGGCCTACCACGGCGCCACGAAGCTGGTG GTGCTCGGCTGCGTGGCGGG
Product: putative PilN protein
Products: NA
Alternate protein names: Fimbrial Assembly Family Protein; Fimbrial Assembly Protein PilN
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSARRRLAVVPPRAVMRDPARCRAWLGGFNLMPYRQREARLRRRRRAAEFAGAACVGLAAAALSCAGQVRERMRLDTRRM AIEQQLAQWAPQLRAADAAARESAARRRHETVAAEQARPLARAVALFDALRALDYRAVRLLGLRQADGGARLDAQARGPL AAARWVERLRETRADWRVEVAGIDAGEREPATGGSRAIRFVVRVRWPHGGQRPPAVVSRGGASGGERG
Sequences:
>Translated_228_residues MSARRRLAVVPPRAVMRDPARCRAWLGGFNLMPYRQREARLRRRRRAAEFAGAACVGLAAAALSCAGQVRERMRLDTRRM AIEQQLAQWAPQLRAADAAARESAARRRHETVAAEQARPLARAVALFDALRALDYRAVRLLGLRQADGGARLDAQARGPL AAARWVERLRETRADWRVEVAGIDAGEREPATGGSRAIRFVVRVRWPHGGQRPPAVVSRGGASGGERG >Mature_227_residues SARRRLAVVPPRAVMRDPARCRAWLGGFNLMPYRQREARLRRRRRAAEFAGAACVGLAAAALSCAGQVRERMRLDTRRMA IEQQLAQWAPQLRAADAAARESAARRRHETVAAEQARPLARAVALFDALRALDYRAVRLLGLRQADGGARLDAQARGPLA AARWVERLRETRADWRVEVAGIDAGEREPATGGSRAIRFVVRVRWPHGGQRPPAVVSRGGASGGERG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25093; Mature: 24962
Theoretical pI: Translated: 12.31; Mature: 12.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARRRLAVVPPRAVMRDPARCRAWLGGFNLMPYRQREARLRRRRRAAEFAGAACVGLAA CCCCCCEEECCCHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AALSCAGQVRERMRLDTRRMAIEQQLAQWAPQLRAADAAARESAARRRHETVAAEQARPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAVALFDALRALDYRAVRLLGLRQADGGARLDAQARGPLAAARWVERLRETRADWRVEV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE AGIDAGEREPATGGSRAIRFVVRVRWPHGGQRPPAVVSRGGASGGERG EECCCCCCCCCCCHHHHEEEEEEEECCCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure SARRRLAVVPPRAVMRDPARCRAWLGGFNLMPYRQREARLRRRRRAAEFAGAACVGLAA CCCCCEEECCCHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AALSCAGQVRERMRLDTRRMAIEQQLAQWAPQLRAADAAARESAARRRHETVAAEQARPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAVALFDALRALDYRAVRLLGLRQADGGARLDAQARGPLAAARWVERLRETRADWRVEV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE AGIDAGEREPATGGSRAIRFVVRVRWPHGGQRPPAVVSRGGASGGERG EECCCCCCCCCCCHHHHEEEEEEEECCCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA