| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is paaC [H]
Identifier: 238025913
GI number: 238025913
Start: 252963
End: 253769
Strand: Reverse
Name: paaC [H]
Synonym: bglu_1g02390
Alternate gene names: 238025913
Gene position: 253769-252963 (Counterclockwise)
Preceding gene: 238025914
Following gene: 238025912
Centisome position: 6.5
GC content: 70.26
Gene sequence:
>807_bases ATGACGACGCCCCGGCCCTCCCATCTGTCCTACGTGCTGCGCCTCGCGGACAGCGCGCTGATCCTCGGCCAGCGCAACGC CGAGTGGTGCGGGCACGGCCCCATCCTCGAAGAGGACATCGCGCTGACCAACATGAGCCTCGACCTGATCGGCCAGGCTC GGCTGCTCTACGCGCACGCCGCCGACCTCGAACACGCGCTGCACGGCACCACCCGGACCGAGGACGATTACGCGTACTTC CGCAGCGAGCGCGAGTTCACGAACCTGACGCTGGTCGAGCTGCCGCATTACGGGCCGGTCAGCGGCACCGCGCACGCCAG CAAGGACTACGCCGTCACGATCGTGCGCAATTTCCTCTACGCGACGCTGATGCTGCACCTCTGGACGGCGCTCGAAGGCT CGGCCGATCCGCAACTGGCCGCGATCGCCGCGAAGTCGGTCAAGGAAACGCGCTACCACGAGCATCACGCGCGCGAATGG CTGATCCGCTTCGGCGACGGCACCGACGAATCGCACCGTCGCGCGCAGGCCGCGCTCGACTACCTGATGCCCTACACGCG CGAATGCTTCGCGGTCGACGCGGTCGAGCGCGAGGTCGCGGCGGCCGGCATCGCGCCAGCGGCCGACACGCTCGAGGCGG CCTGGCGCGCAGACCTCGATGCCGCACTGGCCGAGGCAACGCTGGCGGCGCCCGCACCGGGCGCCTACGTGCCGGCCGGC CGGCGCGGCGAGCATTCCGAGCACATGGGCTTTCTGCTCGCCCAGATGCAGAGCCTCGCCCGCCAGCATCCGGGCGCCAG CTGGTAA
Upstream 100 bases:
>100_bases AACCAGAAGGCGGAGCTGTTCGAACCGGCCGGCGACAAGATCTACCGCCATCCGACGTTCTACACGCTGCCCGACGAAGT CAACCACATGTGAGCCCGCG
Downstream 100 bases:
>100_bases TGCCCGCGGCGTCTTCGTTCCGGAGAGAACCCATGATGTCCGCGCCGCCCGCCTCCGTCGCCTCCGTCGCCAGCGTCGAT GCCGACGCCGAGCTTGCGCG
Product: phenylacetate-CoA oxygenase subunit PaaI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTTPRPSHLSYVLRLADSALILGQRNAEWCGHGPILEEDIALTNMSLDLIGQARLLYAHAADLEHALHGTTRTEDDYAYF RSEREFTNLTLVELPHYGPVSGTAHASKDYAVTIVRNFLYATLMLHLWTALEGSADPQLAAIAAKSVKETRYHEHHAREW LIRFGDGTDESHRRAQAALDYLMPYTRECFAVDAVEREVAAAGIAPAADTLEAAWRADLDAALAEATLAAPAPGAYVPAG RRGEHSEHMGFLLAQMQSLARQHPGASW
Sequences:
>Translated_268_residues MTTPRPSHLSYVLRLADSALILGQRNAEWCGHGPILEEDIALTNMSLDLIGQARLLYAHAADLEHALHGTTRTEDDYAYF RSEREFTNLTLVELPHYGPVSGTAHASKDYAVTIVRNFLYATLMLHLWTALEGSADPQLAAIAAKSVKETRYHEHHAREW LIRFGDGTDESHRRAQAALDYLMPYTRECFAVDAVEREVAAAGIAPAADTLEAAWRADLDAALAEATLAAPAPGAYVPAG RRGEHSEHMGFLLAQMQSLARQHPGASW >Mature_267_residues TTPRPSHLSYVLRLADSALILGQRNAEWCGHGPILEEDIALTNMSLDLIGQARLLYAHAADLEHALHGTTRTEDDYAYFR SEREFTNLTLVELPHYGPVSGTAHASKDYAVTIVRNFLYATLMLHLWTALEGSADPQLAAIAAKSVKETRYHEHHAREWL IRFGDGTDESHRRAQAALDYLMPYTRECFAVDAVEREVAAAGIAPAADTLEAAWRADLDAALAEATLAAPAPGAYVPAGR RGEHSEHMGFLLAQMQSLARQHPGASW
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787656, Length=259, Percent_Identity=44.7876447876448, Blast_Score=207, Evalue=5e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011882 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 29479; Mature: 29348
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPRPSHLSYVLRLADSALILGQRNAEWCGHGPILEEDIALTNMSLDLIGQARLLYAHA CCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH ADLEHALHGTTRTEDDYAYFRSEREFTNLTLVELPHYGPVSGTAHASKDYAVTIVRNFLY HHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH ATLMLHLWTALEGSADPQLAAIAAKSVKETRYHEHHAREWLIRFGDGTDESHRRAQAALD HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH YLMPYTRECFAVDAVEREVAAAGIAPAADTLEAAWRADLDAALAEATLAAPAPGAYVPAG HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RRGEHSEHMGFLLAQMQSLARQHPGASW CCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTPRPSHLSYVLRLADSALILGQRNAEWCGHGPILEEDIALTNMSLDLIGQARLLYAHA CCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH ADLEHALHGTTRTEDDYAYFRSEREFTNLTLVELPHYGPVSGTAHASKDYAVTIVRNFLY HHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH ATLMLHLWTALEGSADPQLAAIAAKSVKETRYHEHHAREWLIRFGDGTDESHRRAQAALD HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH YLMPYTRECFAVDAVEREVAAAGIAPAADTLEAAWRADLDAALAEATLAAPAPGAYVPAG HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RRGEHSEHMGFLLAQMQSLARQHPGASW CCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]