Click here to switch to the map view.

The map label for this gene is paaD [H]

Identifier: 238025912

GI number: 238025912

Start: 252334

End: 252927

Strand: Reverse

Name: paaD [H]

Synonym: bglu_1g02380

Alternate gene names: 238025912

Gene position: 252927-252334 (Counterclockwise)

Preceding gene: 238025913

Following gene: 238025911

Centisome position: 6.47

GC content: 73.91

Gene sequence:

>594_bases
ATGTCCGCGCCGCCCGCCTCCGTCGCCTCCGTCGCCAGCGTCGATGCCGACGCCGAGCTTGCGCGCGCGCGCGCCGCGCT
CGACACGGTGCCGGACCCCGAGATCCCGGTCGTCTCGATCGGCGAGCTCGGCATCCTGCGCGAGGTGCGGCGCGCGGCCG
ACGCGACGCTCGAGATTGTGATCACGCCGACCTACTCCGGCTGTCCGGCGATGTCGCAGATCGCCGAGGACATCGGCGCC
GCGCTCGACCGCGCCGGCGTGCCGGCCTACCGAATCGTCACGGTGCTGTCGCCGGCCTGGACCACCGACTGGATCACCGA
CGCCGCGCGTGAAAAGCTGCGCGCCTACGGCATCGCGCCGCCGGTTGGCAGCTGCGCGAGCGGCGGCGCGGCAGCTTGCG
GCGCCGCAAGCGGAGCCCGCCCCGCCGCCGCGCAGGTGATCCGCTTCGCACCGAAGCCGGGCGCCGCCCCCGCATGCCCG
CGCTGCGGTTCGCGCCATACCGAGCGGCTCGCGCAGTTCGCGTCGACCGCCTGCAAGGCGCTGTACCGCTGCCTCGACTG
TCGCGAACCCTTCGACTACTTCAAGCCCTACTGA

Upstream 100 bases:

>100_bases
ACATGGGCTTTCTGCTCGCCCAGATGCAGAGCCTCGCCCGCCAGCATCCGGGCGCCAGCTGGTAATGCCCGCGGCGTCTT
CGTTCCGGAGAGAACCCATG

Downstream 100 bases:

>100_bases
CATGGCGACTCCGCAATTCCACCCGCTGCGCATTCGCGACGTGCAACCCGAGACCGCCGACGCGGTGACGGTCGCGTTCG
AGGTTCCCGCCGAGCTGCGC

Product: phenylacetate-CoA oxygenase subunit PaaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSAPPASVASVASVDADAELARARAALDTVPDPEIPVVSIGELGILREVRRAADATLEIVITPTYSGCPAMSQIAEDIGA
ALDRAGVPAYRIVTVLSPAWTTDWITDAAREKLRAYGIAPPVGSCASGGAAACGAASGARPAAAQVIRFAPKPGAAPACP
RCGSRHTERLAQFASTACKALYRCLDCREPFDYFKPY

Sequences:

>Translated_197_residues
MSAPPASVASVASVDADAELARARAALDTVPDPEIPVVSIGELGILREVRRAADATLEIVITPTYSGCPAMSQIAEDIGA
ALDRAGVPAYRIVTVLSPAWTTDWITDAAREKLRAYGIAPPVGSCASGGAAACGAASGARPAAAQVIRFAPKPGAAPACP
RCGSRHTERLAQFASTACKALYRCLDCREPFDYFKPY
>Mature_196_residues
SAPPASVASVASVDADAELARARAALDTVPDPEIPVVSIGELGILREVRRAADATLEIVITPTYSGCPAMSQIAEDIGAA
LDRAGVPAYRIVTVLSPAWTTDWITDAAREKLRAYGIAPPVGSCASGGAAACGAASGARPAAAQVIRFAPKPGAAPACPR
CGSRHTERLAQFASTACKALYRCLDCREPFDYFKPY

Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510939, Length=177, Percent_Identity=44.0677966101695, Blast_Score=144, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744
- InterPro:   IPR011883 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 20403; Mature: 20272

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPPASVASVASVDADAELARARAALDTVPDPEIPVVSIGELGILREVRRAADATLEIV
CCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHCCEEEEE
ITPTYSGCPAMSQIAEDIGAALDRAGVPAYRIVTVLSPAWTTDWITDAAREKLRAYGIAP
EECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
PVGSCASGGAAACGAASGARPAAAQVIRFAPKPGAAPACPRCGSRHTERLAQFASTACKA
CCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LYRCLDCREPFDYFKPY
HHHHHHCCCCHHHCCCC
>Mature Secondary Structure 
SAPPASVASVASVDADAELARARAALDTVPDPEIPVVSIGELGILREVRRAADATLEIV
CCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHCCEEEEE
ITPTYSGCPAMSQIAEDIGAALDRAGVPAYRIVTVLSPAWTTDWITDAAREKLRAYGIAP
EECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
PVGSCASGGAAACGAASGARPAAAQVIRFAPKPGAAPACPRCGSRHTERLAQFASTACKA
CCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LYRCLDCREPFDYFKPY
HHHHHHCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]