| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025910
Identifier: 238025910
GI number: 238025910
Start: 250295
End: 251116
Strand: Reverse
Name: 238025910
Synonym: bglu_1g02360
Alternate gene names: NA
Gene position: 251116-250295 (Counterclockwise)
Preceding gene: 238025911
Following gene: 238025909
Centisome position: 6.43
GC content: 73.11
Gene sequence:
>822_bases ATGAGCACTCTTCATGTCACCGTCGGCGGTTCCGCCGCCGAATCGCTGCGCGCCGCGCTGGCCGCAGCCGGCCGCGACAA TGCCGTGGTCGAACTCCTCGACGATCTGGCCGTGGGCCCGCTGCGCGGCATCGACGACGCGCCCGAGCCGCGCGCCGCAT TTTGGGAACGGATCTTCGCCGACACGCCGCCCGACTGGGACTCACGGCTCGCCGCCGAACTCGACAAGCTCGCAAGGCTC GCCGCCGGCTCCGGCCAGGTGGTGATTTGGCATGCGCAGAGCGCGGCCGACCAGCTGATGCTGCGCCGCGTCGCCTATCA CCTGCGCCATGCGCCGCAACGTCTCAACGAGGTCCGGCTGTCGGCCGCCGACCTGGGTCCGCGCACGCATCCGCCCGGCC GCGAGGCCGCGGTCTCGGTCGACATGTTCGGCCCCGAACGGCTCCGCGCGAAGCTGCCGGAGGCGGCGCCGATCTCGGTG CTGCGCATCGGCCGGCTCGCGCTCGAATGGCAGGAGGCCAAGCAGGTCAACGCCGAGTTGCGCTATTGGATCGACAACAC CTTCAAGAGCGGGCACTACGCCGACATCGACGCGCTCGCGCTCGAACAGGCCGGCGAAGCCTGGATGCCGGCCGCGCGCG TGGTCGGCGCCATCATCGCGCTCGCCAATCGCGGCCACCTCCGCCTCGGCGACAGCATCGCGTTCTGGCGCTGCCGCGAG CTGGCCGCCGCGGGCCGGCTCGAACTGCGCGGCGGCGCGCCCGGGCCCGACAATCTGCGCGCGGCCTCGCTGCGCGCGGT ACCGGCCGCCGCGCCGCGCTGA
Upstream 100 bases:
>100_bases ATATCTCGTGGCCGGGCATCTCGCTTACACTAGGGGCCGCTTCTCGAGCCGGATCCGCGAATCCGGGCGAAAGCGGTCCT TTTTCGTTGACCTCTCGCTG
Downstream 100 bases:
>100_bases GCGCCACCGCTGCCTTCGTCCACCGCGGCAGGCCCGCCGCCCCGATCCGACTCCACCAACGCCATGGCCCGCACCCGAGC GCCCGACCACGAATCCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSTLHVTVGGSAAESLRAALAAAGRDNAVVELLDDLAVGPLRGIDDAPEPRAAFWERIFADTPPDWDSRLAAELDKLARL AAGSGQVVIWHAQSAADQLMLRRVAYHLRHAPQRLNEVRLSAADLGPRTHPPGREAAVSVDMFGPERLRAKLPEAAPISV LRIGRLALEWQEAKQVNAELRYWIDNTFKSGHYADIDALALEQAGEAWMPAARVVGAIIALANRGHLRLGDSIAFWRCRE LAAAGRLELRGGAPGPDNLRAASLRAVPAAAPR
Sequences:
>Translated_273_residues MSTLHVTVGGSAAESLRAALAAAGRDNAVVELLDDLAVGPLRGIDDAPEPRAAFWERIFADTPPDWDSRLAAELDKLARL AAGSGQVVIWHAQSAADQLMLRRVAYHLRHAPQRLNEVRLSAADLGPRTHPPGREAAVSVDMFGPERLRAKLPEAAPISV LRIGRLALEWQEAKQVNAELRYWIDNTFKSGHYADIDALALEQAGEAWMPAARVVGAIIALANRGHLRLGDSIAFWRCRE LAAAGRLELRGGAPGPDNLRAASLRAVPAAAPR >Mature_272_residues STLHVTVGGSAAESLRAALAAAGRDNAVVELLDDLAVGPLRGIDDAPEPRAAFWERIFADTPPDWDSRLAAELDKLARLA AGSGQVVIWHAQSAADQLMLRRVAYHLRHAPQRLNEVRLSAADLGPRTHPPGREAAVSVDMFGPERLRAKLPEAAPISVL RIGRLALEWQEAKQVNAELRYWIDNTFKSGHYADIDALALEQAGEAWMPAARVVGAIIALANRGHLRLGDSIAFWRCREL AAAGRLELRGGAPGPDNLRAASLRAVPAAAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29414; Mature: 29283
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLHVTVGGSAAESLRAALAAAGRDNAVVELLDDLAVGPLRGIDDAPEPRAAFWERIFA CCEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC DTPPDWDSRLAAELDKLARLAAGSGQVVIWHAQSAADQLMLRRVAYHLRHAPQRLNEVRL CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAADLGPRTHPPGREAAVSVDMFGPERLRAKLPEAAPISVLRIGRLALEWQEAKQVNAEL HHHHCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHH RYWIDNTFKSGHYADIDALALEQAGEAWMPAARVVGAIIALANRGHLRLGDSIAFWRCRE HEEEHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHH LAAAGRLELRGGAPGPDNLRAASLRAVPAAAPR HHHCCCEEECCCCCCCCCCHHHHHEECCCCCCC >Mature Secondary Structure STLHVTVGGSAAESLRAALAAAGRDNAVVELLDDLAVGPLRGIDDAPEPRAAFWERIFA CEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC DTPPDWDSRLAAELDKLARLAAGSGQVVIWHAQSAADQLMLRRVAYHLRHAPQRLNEVRL CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAADLGPRTHPPGREAAVSVDMFGPERLRAKLPEAAPISVLRIGRLALEWQEAKQVNAEL HHHHCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHH RYWIDNTFKSGHYADIDALALEQAGEAWMPAARVVGAIIALANRGHLRLGDSIAFWRCRE HEEEHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHH LAAAGRLELRGGAPGPDNLRAASLRAVPAAAPR HHHCCCEEECCCCCCCCCCHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA