| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is paaE [H]
Identifier: 238025911
GI number: 238025911
Start: 251244
End: 252332
Strand: Reverse
Name: paaE [H]
Synonym: bglu_1g02370
Alternate gene names: 238025911
Gene position: 252332-251244 (Counterclockwise)
Preceding gene: 238025912
Following gene: 238025910
Centisome position: 6.46
GC content: 68.04
Gene sequence:
>1089_bases ATGGCGACTCCGCAATTCCACCCGCTGCGCATTCGCGACGTGCAACCCGAGACCGCCGACGCGGTGACGGTCGCGTTCGA GGTTCCCGCCGAGCTGCGCGAGCAGTATCGCTTCACGCAGGGTCAGTTCGTGACGCTCAGGGCGCAGATCGGCGGCGAGG AAACCCGCCGCTCGTACTCGATCTGCGTCGGCACCACCGATTACGACCGCGACGGCGAGCTGCGGATCGGCATCAAGCGC GTGCGGGGCGGGCGCTTCTCGAACTTCGCGTTCGACACGCTGAAGGCCGGCGACACGATCGACGTGATGACGCCGGACGG CCGTTTCTTCACGCACCTGAATGCCGAGCACGGCAAGCACTACGTGGCGTTCTCGGGCGGCTCGGGCATCACCCCGGTGC TCGCGATCGTGCGCACCACGCTCGAGCTCGAGCCGCGCAGCACGTTCACGCTGATCTACGGCAACCGTAGCGTCGATTCG ATCATGTTCGCCGAGCAGCTGGAGGACCTGAAGAACCGCTTCATGCAGCGCTTCTCGCTCTACCACGTGCTGTCCGACGA GTTGCAGGACGTCGATCTGTTCAACGGCGTGCTCGACCAGGCCAAATGCGCGGCCTTTCTCGACACGCTGGTGCCGGCCG CCTCGATCGACGAAGCGTTCATCTGCGGCCCAGCGCCGATGATGGACGCGGCCGAGGCAGCGCTCGGCGCGGCCGGCGTG GCGCGCGAGCGGATCCATGTCGAGCGTTTCGGCACGCCGCTGCCGCAGGCGGGCGCGCCGGTCGTGGAGATCACCGAGGC GACGCCGGCCGCCGCGCTCGAGATCATGCTCGACGGCAAGACGCGCAAGCTGCGCCTGCCCTACGAGGGCGTGAGCCTGC TCGACGTCGGCCTGCGCGCCGGCCTTGCGCTGCCTTATGCCTGCAAGGGCGGCGTCTGCTGCACCTGCCGCGCGAAGGTG GTCGAGGGCGAGGTGCGGATGGACAGGAACTACACGCTGGAGGAACAGGAGGTGCGCGACGGGTTCGTGCTGACCTGCCA GTGCCACCCGGTCAGCGAGCGCGTGGTGGTGAGCTTCGACGAGCGTTGA
Upstream 100 bases:
>100_bases CATACCGAGCGGCTCGCGCAGTTCGCGTCGACCGCCTGCAAGGCGCTGTACCGCTGCCTCGACTGTCGCGAACCCTTCGA CTACTTCAAGCCCTACTGAC
Downstream 100 bases:
>100_bases GCGACCGGGCGACGCGCCGGCCGCGGGATATCTCGTGGCCGGGCATCTCGCTTACACTAGGGGCCGCTTCTCGAGCCGGA TCCGCGAATCCGGGCGAAAG
Product: Flavodoxin reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MATPQFHPLRIRDVQPETADAVTVAFEVPAELREQYRFTQGQFVTLRAQIGGEETRRSYSICVGTTDYDRDGELRIGIKR VRGGRFSNFAFDTLKAGDTIDVMTPDGRFFTHLNAEHGKHYVAFSGGSGITPVLAIVRTTLELEPRSTFTLIYGNRSVDS IMFAEQLEDLKNRFMQRFSLYHVLSDELQDVDLFNGVLDQAKCAAFLDTLVPAASIDEAFICGPAPMMDAAEAALGAAGV ARERIHVERFGTPLPQAGAPVVEITEATPAAALEIMLDGKTRKLRLPYEGVSLLDVGLRAGLALPYACKGGVCCTCRAKV VEGEVRMDRNYTLEEQEVRDGFVLTCQCHPVSERVVVSFDER
Sequences:
>Translated_362_residues MATPQFHPLRIRDVQPETADAVTVAFEVPAELREQYRFTQGQFVTLRAQIGGEETRRSYSICVGTTDYDRDGELRIGIKR VRGGRFSNFAFDTLKAGDTIDVMTPDGRFFTHLNAEHGKHYVAFSGGSGITPVLAIVRTTLELEPRSTFTLIYGNRSVDS IMFAEQLEDLKNRFMQRFSLYHVLSDELQDVDLFNGVLDQAKCAAFLDTLVPAASIDEAFICGPAPMMDAAEAALGAAGV ARERIHVERFGTPLPQAGAPVVEITEATPAAALEIMLDGKTRKLRLPYEGVSLLDVGLRAGLALPYACKGGVCCTCRAKV VEGEVRMDRNYTLEEQEVRDGFVLTCQCHPVSERVVVSFDER >Mature_361_residues ATPQFHPLRIRDVQPETADAVTVAFEVPAELREQYRFTQGQFVTLRAQIGGEETRRSYSICVGTTDYDRDGELRIGIKRV RGGRFSNFAFDTLKAGDTIDVMTPDGRFFTHLNAEHGKHYVAFSGGSGITPVLAIVRTTLELEPRSTFTLIYGNRSVDSI MFAEQLEDLKNRFMQRFSLYHVLSDELQDVDLFNGVLDQAKCAAFLDTLVPAASIDEAFICGPAPMMDAAEAALGAAGVA RERIHVERFGTPLPQAGAPVVEITEATPAAALEIMLDGKTRKLRLPYEGVSLLDVGLRAGLALPYACKGGVCCTCRAKVV EGEVRMDRNYTLEEQEVRDGFVLTCQCHPVSERVVVSFDER
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Homo sapiens, GI49574502, Length=216, Percent_Identity=28.2407407407407, Blast_Score=72, Evalue=7e-13, Organism=Escherichia coli, GI1787658, Length=357, Percent_Identity=45.6582633053221, Blast_Score=311, Evalue=4e-86, Organism=Escherichia coli, GI1787098, Length=350, Percent_Identity=24.8571428571429, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1788104, Length=326, Percent_Identity=21.4723926380368, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788903, Length=223, Percent_Identity=27.3542600896861, Blast_Score=62, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322146, Length=209, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR011884 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39922; Mature: 39791
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPQFHPLRIRDVQPETADAVTVAFEVPAELREQYRFTQGQFVTLRAQIGGEETRRSYS CCCCCCCCEEEEECCCCCCCEEEEEEECCHHHHHHHCCCCCEEEEEEEECCCCHHCCEEE ICVGTTDYDRDGELRIGIKRVRGGRFSNFAFDTLKAGDTIDVMTPDGRFFTHLNAEHGKH EEEECCCCCCCCCEEEEEEEECCCCCCCEEEHHCCCCCEEEEECCCCCEEEEEECCCCCE YVAFSGGSGITPVLAIVRTTLELEPRSTFTLIYGNRSVDSIMFAEQLEDLKNRFMQRFSL EEEEECCCCCHHHHHHHHHHEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH YHVLSDELQDVDLFNGVLDQAKCAAFLDTLVPAASIDEAFICGPAPMMDAAEAALGAAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHH ARERIHVERFGTPLPQAGAPVVEITEATPAAALEIMLDGKTRKLRLPYEGVSLLDVGLRA HHHHEEHHHCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHC GLALPYACKGGVCCTCRAKVVEGEVRMDRNYTLEEQEVRDGFVLTCQCHPVSERVVVSFD CCCCCCCCCCCEEEEEEEEEEECEEEECCCCCCCHHHCCCCEEEEEEECCCCCEEEEEEC ER CC >Mature Secondary Structure ATPQFHPLRIRDVQPETADAVTVAFEVPAELREQYRFTQGQFVTLRAQIGGEETRRSYS CCCCCCCEEEEECCCCCCCEEEEEEECCHHHHHHHCCCCCEEEEEEEECCCCHHCCEEE ICVGTTDYDRDGELRIGIKRVRGGRFSNFAFDTLKAGDTIDVMTPDGRFFTHLNAEHGKH EEEECCCCCCCCCEEEEEEEECCCCCCCEEEHHCCCCCEEEEECCCCCEEEEEECCCCCE YVAFSGGSGITPVLAIVRTTLELEPRSTFTLIYGNRSVDSIMFAEQLEDLKNRFMQRFSL EEEEECCCCCHHHHHHHHHHEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH YHVLSDELQDVDLFNGVLDQAKCAAFLDTLVPAASIDEAFICGPAPMMDAAEAALGAAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHH ARERIHVERFGTPLPQAGAPVVEITEATPAAALEIMLDGKTRKLRLPYEGVSLLDVGLRA HHHHEEHHHCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHC GLALPYACKGGVCCTCRAKVVEGEVRMDRNYTLEEQEVRDGFVLTCQCHPVSERVVVSFD CCCCCCCCCCCEEEEEEEEEEECEEEECCCCCCCHHHCCCCEEEEEEECCCCCEEEEEEC ER CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD [C]
Metal ions: Iron-Sulfur [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]