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The map label for this gene is ompW [H]

Identifier: 238025898

GI number: 238025898

Start: 233976

End: 234812

Strand: Reverse

Name: ompW [H]

Synonym: bglu_1g02240

Alternate gene names: 238025898

Gene position: 234812-233976 (Counterclockwise)

Preceding gene: 238025899

Following gene: 238025893

Centisome position: 6.01

GC content: 66.19

Gene sequence:

>837_bases
GTGAACAAGACCCTTCTTCGCGGCGCAGCCGTGCTCGCCGCCGCGCTCGGCGCCAGCGGCGCGCAGGCGCAAAGCGCCGG
CAGCAACGTTATCGGCCTCGGCTGGTTCCATATCACGCCGATCCAGAGCAGCACGTCGCTGGTCACCAACGTGGCCCCGA
CGCCGATCAACACGCCGCTGAGCCTGCCGCCCTCGTTCGACTCGCCGGGCACCGGGTTGCGCACCAACAACTCGGACACG
CTCGGCCTGACGATCAGCCACTTCTTCACCGATAACGTCGCCGTCACCTCGGTGGCGGGCGTGCCGCCGGTGTTCCAGGT
ATCGGGGCACGGCACGATCGTGCCGCCCGGGCCGGCCGGCGCGCTCGGCACGCAGAACATCGGGCTCGACGCGGTCAACC
CGATCGTCAAGAGCGTGCGCCAGTGGAGCCCGGCCGTGATCCTGCAGTACTACTTCGCGAACGCCAATTCGAAGCTGCGG
CCGTTCGTCGGCATCGGCGTGTCGTACAACTGGTTCAGCGACCTGCAGCTCAGCAACAACTTCATCAAGCAGACGCAGGA
CAACCTCGGTTCGATCCTCGCGGCCGGCGCCGGCAAGCCCGGCACCACGCAGGTGTCGGCGAAGGCGTCGTCGTCGTGGC
AGCCGGTGTTCAACGCGGGTCTGACCTACTCGATCAACCAGCACTGGGGGCTGATTGCCTCGGTAACCTACATCCCGCTG
AAGACCACCTCGACCGTGACGATCAAGGCGGCCGACGGCACGACGCTCGCCGAATCGAAGGGCGACCTGAAGGCAAACCC
GATCATCAGCTACCTCGCGGTGTCGTACAAATTCTGA

Upstream 100 bases:

>100_bases
ATCTTCACGGGTGGCGTGTTCGGTTTCCTCGACAACAACAATGCGACGTCGCCGTATTTCACGATCGGCGCGTTCGTCCA
ATAAGTACGGGGGAGTTACC

Downstream 100 bases:

>100_bases
CGCGGGACGGCCGGGATCGCCGGATGGCGCCCGGCAAAATCATCGGAGGCAATCGGGGGACGAAAAAAAGCCCGCCTGAA
GAGGCGGGCTGAATCCATAT

Product: OmpW family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNKTLLRGAAVLAAALGASGAQAQSAGSNVIGLGWFHITPIQSSTSLVTNVAPTPINTPLSLPPSFDSPGTGLRTNNSDT
LGLTISHFFTDNVAVTSVAGVPPVFQVSGHGTIVPPGPAGALGTQNIGLDAVNPIVKSVRQWSPAVILQYYFANANSKLR
PFVGIGVSYNWFSDLQLSNNFIKQTQDNLGSILAAGAGKPGTTQVSAKASSSWQPVFNAGLTYSINQHWGLIASVTYIPL
KTTSTVTIKAADGTTLAESKGDLKANPIISYLAVSYKF

Sequences:

>Translated_278_residues
MNKTLLRGAAVLAAALGASGAQAQSAGSNVIGLGWFHITPIQSSTSLVTNVAPTPINTPLSLPPSFDSPGTGLRTNNSDT
LGLTISHFFTDNVAVTSVAGVPPVFQVSGHGTIVPPGPAGALGTQNIGLDAVNPIVKSVRQWSPAVILQYYFANANSKLR
PFVGIGVSYNWFSDLQLSNNFIKQTQDNLGSILAAGAGKPGTTQVSAKASSSWQPVFNAGLTYSINQHWGLIASVTYIPL
KTTSTVTIKAADGTTLAESKGDLKANPIISYLAVSYKF
>Mature_278_residues
MNKTLLRGAAVLAAALGASGAQAQSAGSNVIGLGWFHITPIQSSTSLVTNVAPTPINTPLSLPPSFDSPGTGLRTNNSDT
LGLTISHFFTDNVAVTSVAGVPPVFQVSGHGTIVPPGPAGALGTQNIGLDAVNPIVKSVRQWSPAVILQYYFANANSKLR
PFVGIGVSYNWFSDLQLSNNFIKQTQDNLGSILAAGAGKPGTTQVSAKASSSWQPVFNAGLTYSINQHWGLIASVTYIPL
KTTSTVTIKAADGTTLAESKGDLKANPIISYLAVSYKF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=207, Percent_Identity=26.0869565217391, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 28842; Mature: 28842

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTLLRGAAVLAAALGASGAQAQSAGSNVIGLGWFHITPIQSSTSLVTNVAPTPINTPL
CCCHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCCC
SLPPSFDSPGTGLRTNNSDTLGLTISHFFTDNVAVTSVAGVPPVFQVSGHGTIVPPGPAG
CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCEEEECCCCEEECCCCCC
ALGTQNIGLDAVNPIVKSVRQWSPAVILQYYFANANSKLRPFVGIGVSYNWFSDLQLSNN
CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEECCEECCCCCCCHHHH
FIKQTQDNLGSILAAGAGKPGTTQVSAKASSSWQPVFNAGLTYSINQHWGLIASVTYIPL
HHHHHHHHHHHEEECCCCCCCCEEEEECCCCCCCHHHHCCEEEEECCCCCEEEEEEEEEE
KTTSTVTIKAADGTTLAESKGDLKANPIISYLAVSYKF
ECCCEEEEEECCCCEEECCCCCCCCCHHEEEEEEEECC
>Mature Secondary Structure
MNKTLLRGAAVLAAALGASGAQAQSAGSNVIGLGWFHITPIQSSTSLVTNVAPTPINTPL
CCCHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCCC
SLPPSFDSPGTGLRTNNSDTLGLTISHFFTDNVAVTSVAGVPPVFQVSGHGTIVPPGPAG
CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCEEEECCCCEEECCCCCC
ALGTQNIGLDAVNPIVKSVRQWSPAVILQYYFANANSKLRPFVGIGVSYNWFSDLQLSNN
CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEECCEECCCCCCCHHHH
FIKQTQDNLGSILAAGAGKPGTTQVSAKASSSWQPVFNAGLTYSINQHWGLIASVTYIPL
HHHHHHHHHHHEEECCCCCCCCEEEEECCCCCCCHHHHCCEEEEECCCCCEEEEEEEEEE
KTTSTVTIKAADGTTLAESKGDLKANPIISYLAVSYKF
ECCCEEEEEECCCCEEECCCCCCCCCHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]