| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025893
Identifier: 238025893
GI number: 238025893
Start: 229592
End: 230005
Strand: Reverse
Name: 238025893
Synonym: bglu_1g02190
Alternate gene names: NA
Gene position: 230005-229592 (Counterclockwise)
Preceding gene: 238025898
Following gene: 238025892
Centisome position: 5.89
GC content: 71.5
Gene sequence:
>414_bases ATGAAGCCATTGATGAACGTACCGAAACGAATCGCGGACTGCGCGCTGCTGGCCGGCATCGCCGCCGCGCTGGCCGGCTG CGGCAGCAGCAGCGACGGCCCGCGTCCGCTCGCCCAGTCACAGGCCGCTGCGATCGGCGCGCCGCCGGGCGCGATGATCT ATGTGTCGTCGGCACTGGGCGCGCCGCAGATCGAGCAATGTCTGTCCAGCCGCCTGTCGCGCGCACGCGTCACCCGGCAG GGCACCGTCGCGACGGTACTGGTCGGCCCGTACTCCGAGGCCGACGACTGGCGCATCACGCTCGAGCGCAACGCGGCAGC CGGCACGACGATTGCGGTCTACCCGCCACGCAGCGGCGACGGCGAACCCGACGAGGCAACGCTGCGCTTCCATCTCGCGC GCTGCGCGGTCTGA
Upstream 100 bases:
>100_bases CTCGACCCGCCACGCTTGTTAGCCTGCCCCGACATCGCTGGCTGCCGGCCCGCCCGGGGGCGCAAGACAGCGATGCGTTG ACGGACCCCGTACCACGAGA
Downstream 100 bases:
>100_bases CCGTGCCACCAAGCGGGCCGCCGCGCGAGGCGTGAGGCGAGCCGCGAACCGTGCGGGCGCGACGCACAGCACTCGTCCAC CGGCGGCTGTGGACAGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKPLMNVPKRIADCALLAGIAAALAGCGSSSDGPRPLAQSQAAAIGAPPGAMIYVSSALGAPQIEQCLSSRLSRARVTRQ GTVATVLVGPYSEADDWRITLERNAAAGTTIAVYPPRSGDGEPDEATLRFHLARCAV
Sequences:
>Translated_137_residues MKPLMNVPKRIADCALLAGIAAALAGCGSSSDGPRPLAQSQAAAIGAPPGAMIYVSSALGAPQIEQCLSSRLSRARVTRQ GTVATVLVGPYSEADDWRITLERNAAAGTTIAVYPPRSGDGEPDEATLRFHLARCAV >Mature_137_residues MKPLMNVPKRIADCALLAGIAAALAGCGSSSDGPRPLAQSQAAAIGAPPGAMIYVSSALGAPQIEQCLSSRLSRARVTRQ GTVATVLVGPYSEADDWRITLERNAAAGTTIAVYPPRSGDGEPDEATLRFHLARCAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14102; Mature: 14102
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLMNVPKRIADCALLAGIAAALAGCGSSSDGPRPLAQSQAAAIGAPPGAMIYVSSALG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHCCCCCCCEEEEEECCCC APQIEQCLSSRLSRARVTRQGTVATVLVGPYSEADDWRITLERNAAAGTTIAVYPPRSGD CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCCC GEPDEATLRFHLARCAV CCCCCHHHHHHHHHHCC >Mature Secondary Structure MKPLMNVPKRIADCALLAGIAAALAGCGSSSDGPRPLAQSQAAAIGAPPGAMIYVSSALG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHCCCCCCCEEEEEECCCC APQIEQCLSSRLSRARVTRQGTVATVLVGPYSEADDWRITLERNAAAGTTIAVYPPRSGD CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCCC GEPDEATLRFHLARCAV CCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA