| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mosC [H]
Identifier: 238025879
GI number: 238025879
Start: 216364
End: 217569
Strand: Reverse
Name: mosC [H]
Synonym: bglu_1g02050
Alternate gene names: 238025879
Gene position: 217569-216364 (Counterclockwise)
Preceding gene: 238025883
Following gene: 238025877
Centisome position: 5.57
GC content: 73.55
Gene sequence:
>1206_bases GTGTCCGATCCGTCCTCCCGCCTTCCCCCGCAGCCCGCCGCCCACCGCGCCCTGTCCCCGGCGGCACGCCACCGCGCCCG CGCAGCCACCATGGCGCTGTTCTTCGTCGCCGGCATGATGTACGCCTCGTGGGGCGTGCACGTGCCGACCGTGCGCGACC GCTTCGCGCTGAGTCCCGCGCTGCTGTCGCTCGCGCTGCTCGCCGTGGCGATCGGCTCGATCATCGCGATGACCACCAAC GCGAAATGGATCGCGCGGGTGGGCACGCGCACCGCCTGCCTGGCCGGCGGCATCGGCATGTCGGTGTGCGGCGCGCTGAT CCTGCTCGCGCCGAGCTATCCGCTGCTGATCGTCGTGCTGATGCTGTTCGGCTTCACGATGGCCACGCTCGACGTCGCCA TGAACGCCGAGGCGAGCGCGGTGGAGATCGCGTTCGGCAAGCCGATCATCTCGATGCTGCACGGCATGTTCAGCATCGGC GGGCTGAGCGGCGCGGCGCTCGGCGGCGCGCTGCTGTCGGCGGGCATGGCGCCGCCCATGCACCTGGCGCTCGCCTCGCT GGTGTGCGCGGCGATCATCGCGGCGGCCTGCCCGGCGGTGCTGCCGCACGTGCCGCATCAGGCGGCGGAGCACGACTCGT CGCTCAACCGCTGGCGCTCGGCCGCGCTCTGGGCGCTCGGCGCGATCGCCCTCGTCTCGCTGATCGCCGAGGGCGCGATG TACGACTGGGCCACCGTCTACATGCGCGACGTGGTGGCCGCCACGCCGGCGTTCGCGAGCGCCGCCTATGCCGCGTTCTC GGGCGGCATGGCGGGCGGCCGCTTCGCGGGCGACGTCGTGCGCGCGCGCTTCGGCGCGCCGCAGCTGGTGTTCGCGAGCG CGACGTTCGCCTGCATCGGGATGATCGGCGCGCTGCTGCTGCCGTATCCGGCGCCGGCGCTGATCGGCTTCACGATGATG GGCCTGGGCCTGTCCAACATGATGCCGCTGCTGTTCGCCGCGGCCGCGCGCGTGGCCGGGATCTCGCCCGCCGAAGGGCT CGCGCACGTGGCCGGCCTCGCCTATTTCGGGCTGATGTTCGGCCCGGTCGTGATCGGCGGCGTCGCGCAGGCCGCCGGGC TGCCGGTCGGGCTGGCGATCGTCGCGCTGTGCGCGGCGATCGTCGCCGCGTTCGCGCCGCGGGTCATGCGCCGGCTGAAC GTCTGA
Upstream 100 bases:
>100_bases GCGCATCGTCCGCATGAGGCGCGCGACCGCCAACGATAACCCTCCTGGCGCGCGACCGGCGTGATTCCGAACGCCGGCGA CGCGCCTCGCCGAGCTCACC
Downstream 100 bases:
>100_bases CAGGCTGGCGCGCCGCGGGCTCCGGCAGCGGGCCTGCGCGACGCCGGCAGCGGGCATGGCCGCTCACGCCGGCATAGGCG CCCGCGCCTCGGCGTCCGGC
Product: amino acid ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSDPSSRLPPQPAAHRALSPAARHRARAATMALFFVAGMMYASWGVHVPTVRDRFALSPALLSLALLAVAIGSIIAMTTN AKWIARVGTRTACLAGGIGMSVCGALILLAPSYPLLIVVLMLFGFTMATLDVAMNAEASAVEIAFGKPIISMLHGMFSIG GLSGAALGGALLSAGMAPPMHLALASLVCAAIIAAACPAVLPHVPHQAAEHDSSLNRWRSAALWALGAIALVSLIAEGAM YDWATVYMRDVVAATPAFASAAYAAFSGGMAGGRFAGDVVRARFGAPQLVFASATFACIGMIGALLLPYPAPALIGFTMM GLGLSNMMPLLFAAAARVAGISPAEGLAHVAGLAYFGLMFGPVVIGGVAQAAGLPVGLAIVALCAAIVAAFAPRVMRRLN V
Sequences:
>Translated_401_residues MSDPSSRLPPQPAAHRALSPAARHRARAATMALFFVAGMMYASWGVHVPTVRDRFALSPALLSLALLAVAIGSIIAMTTN AKWIARVGTRTACLAGGIGMSVCGALILLAPSYPLLIVVLMLFGFTMATLDVAMNAEASAVEIAFGKPIISMLHGMFSIG GLSGAALGGALLSAGMAPPMHLALASLVCAAIIAAACPAVLPHVPHQAAEHDSSLNRWRSAALWALGAIALVSLIAEGAM YDWATVYMRDVVAATPAFASAAYAAFSGGMAGGRFAGDVVRARFGAPQLVFASATFACIGMIGALLLPYPAPALIGFTMM GLGLSNMMPLLFAAAARVAGISPAEGLAHVAGLAYFGLMFGPVVIGGVAQAAGLPVGLAIVALCAAIVAAFAPRVMRRLN V >Mature_400_residues SDPSSRLPPQPAAHRALSPAARHRARAATMALFFVAGMMYASWGVHVPTVRDRFALSPALLSLALLAVAIGSIIAMTTNA KWIARVGTRTACLAGGIGMSVCGALILLAPSYPLLIVVLMLFGFTMATLDVAMNAEASAVEIAFGKPIISMLHGMFSIGG LSGAALGGALLSAGMAPPMHLALASLVCAAIIAAACPAVLPHVPHQAAEHDSSLNRWRSAALWALGAIALVSLIAEGAMY DWATVYMRDVVAATPAFASAAYAAFSGGMAGGRFAGDVVRARFGAPQLVFASATFACIGMIGALLLPYPAPALIGFTMMG LGLSNMMPLLFAAAARVAGISPAEGLAHVAGLAYFGLMFGPVVIGGVAQAAGLPVGLAIVALCAAIVAAFAPRVMRRLNV
Specific function: May be a membrane transport protein that could either transport a precursor for rhizopine biosynthesis into bacteroids or the finished product from the bacteroids [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787068, Length=371, Percent_Identity=30.7277628032345, Blast_Score=133, Evalue=2e-32,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40733; Mature: 40602
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPSSRLPPQPAAHRALSPAARHRARAATMALFFVAGMMYASWGVHVPTVRDRFALSPA CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LLSLALLAVAIGSIIAMTTNAKWIARVGTRTACLAGGIGMSVCGALILLAPSYPLLIVVL HHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH MLFGFTMATLDVAMNAEASAVEIAFGKPIISMLHGMFSIGGLSGAALGGALLSAGMAPPM HHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHH HLALASLVCAAIIAAACPAVLPHVPHQAAEHDSSLNRWRSAALWALGAIALVSLIAEGAM HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH YDWATVYMRDVVAATPAFASAAYAAFSGGMAGGRFAGDVVRARFGAPQLVFASATFACIG HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH MIGALLLPYPAPALIGFTMMGLGLSNMMPLLFAAAARVAGISPAEGLAHVAGLAYFGLMF HHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GPVVIGGVAQAAGLPVGLAIVALCAAIVAAFAPRVMRRLNV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDPSSRLPPQPAAHRALSPAARHRARAATMALFFVAGMMYASWGVHVPTVRDRFALSPA CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LLSLALLAVAIGSIIAMTTNAKWIARVGTRTACLAGGIGMSVCGALILLAPSYPLLIVVL HHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH MLFGFTMATLDVAMNAEASAVEIAFGKPIISMLHGMFSIGGLSGAALGGALLSAGMAPPM HHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHH HLALASLVCAAIIAAACPAVLPHVPHQAAEHDSSLNRWRSAALWALGAIALVSLIAEGAM HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH YDWATVYMRDVVAATPAFASAAYAAFSGGMAGGRFAGDVVRARFGAPQLVFASATFACIG HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH MIGALLLPYPAPALIGFTMMGLGLSNMMPLLFAAAARVAGISPAEGLAHVAGLAYFGLMF HHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GPVVIGGVAQAAGLPVGLAIVALCAAIVAAFAPRVMRRLNV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8349559; 7551036 [H]