Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238025876

Identifier: 238025876

GI number: 238025876

Start: 212133

End: 213587

Strand: Reverse

Name: 238025876

Synonym: bglu_1g02020

Alternate gene names: NA

Gene position: 213587-212133 (Counterclockwise)

Preceding gene: 238025877

Following gene: 238025851

Centisome position: 5.47

GC content: 74.23

Gene sequence:

>1455_bases
GTGCAGGACGATTACCCGAACTACGATGCCACTGACCTCGCCGCGCTGATCGCCACCCGGCGGGCCAGCGCGCGCGAGGT
GCTCGACGCCGCGATCGCGCGCGCCAACGCACTGAATCCGTCGATCAACGCGATCGTGCTGACCGACTACGACGCGGCCC
GCGAGCGGGCCGCCGCGCCGCCGGCCGGCCCGCTCGGCGGCGTGCCCTATCTCGTCAAGGATCTCGCGGCGGCAGCCGGG
CTGAGGATGTCGCTCGGCAGCCGCCACTACCGCTACTTCGTGCCCGACGCCGACGCGCCGTTCATCGCGCGTGCGAAGGC
GGCCGGCGCCAATGTGTTCGGCAAGACCAGCACCGCCGAATTCGGCCAGATGCCGGTGACCGAGCCCGAGCTGTTCGGGC
CGTGCCGCAACCCCTGGAATCTCGATCACACGCCGGGCGGCTCGAGCGGCGGCGCGGCGGCGGCCGTGGCGGCCGGCATC
GTGCCGCTCGCGCATGCGTCCGACGGCGGCGGCTCGATCCGCATCCCCGCCTCGTGCTGCGGCCTGTTCGGCTTCAAGCC
CGGCTACGATCCGCAACTGGCGGCGCAGCCCGTGCCGGGCGACCTGATCGTCAACCATGCGATCTCGCGCAGCGTGCGCG
ACAGCGCGCTGCTGTTCGACCTCACCACGGGGCGCGCCGGCACCTCCGAGGCCACGCTCGCGCGGCTCGACGAACCGGTG
GGGGCGCTGCGCATCGGCCTCGTCACCGATCCGCTGTTCGCGGCGGCGCTGTCGCCCGACGTGCTGGCGGCGCTCGACGA
CGCGGCTAGGCTAGCCGAATCGCTCGGCCACGTGGTGGAGCCGATGAGGCTGCCGATCGACCAGGCGCGCGCGGCCGAGA
CCTTCCTCACCTGCTGGGCCGCCATCGTCGAGCCGCTGGTCCACGACGCGCAGGCGCTCACGGGGCGCCGGCCGCGCGGC
GACGAGTTCGAGCCGGCGAGCCGCGCGATGGCGCAGGTCGGGCGGCATCTCGCGCGCGAGCGTCTGCCGCTCGCGCGCGA
CTGGCAAAAACAGCTGATCGCGCAGGTGGAGAGCGCCACCGCACGCTACGACCTGGTGCTGTGCGCGACGCTGGCGGCAC
CGCCCGTGCGGATCGGCGAGCTGCGCTCCACGCCGTTCGAGCGCGCGCAAATGCGCCTGCTCGCCGCCCTGCCGGCGCGG
CCGCTGCTGCGCATGATGCTCGCGAACACGGCCAAGCGCGCGTTCGCCTGGGCCGGCTGCACCGAGCTGTTCAACCTCAC
CGGCCAGCCGGCGATGTCGGTGCCGCTGCACTGGAACGCACGCGGCCTGCCGGTCGGCGTGCAGTTCGCCGCGCGCCGCG
GCGACGACGCGCGGCTGCTGCGATTCGCGCGCCAGCTCGAACTCGCGCGGCCGTGGTTCGCGCGGCGTCCGCCGCTGGTG
CCGGCGGCGCGCTAA

Upstream 100 bases:

>100_bases
ACCGGCCCGCGCGGGCCGGCGTCCGCACGCGCTGGCCGGCCGCCGGCGCGACGCCGGCGCCGCGCGTGGCCCGATTCCGA
CTCGAACAACGGGGGCCGCG

Downstream 100 bases:

>100_bases
AGCACCGGCGCCGCGGCTCGCGCCGACGAGCGCGGGCCGCGCCGGGCCCCGTGCCTGGGGTGGGCGCGGCCGTTGCGGCG
GCAACGGCCGTGCATGAAAA

Product: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MQDDYPNYDATDLAALIATRRASAREVLDAAIARANALNPSINAIVLTDYDAARERAAAPPAGPLGGVPYLVKDLAAAAG
LRMSLGSRHYRYFVPDADAPFIARAKAAGANVFGKTSTAEFGQMPVTEPELFGPCRNPWNLDHTPGGSSGGAAAAVAAGI
VPLAHASDGGGSIRIPASCCGLFGFKPGYDPQLAAQPVPGDLIVNHAISRSVRDSALLFDLTTGRAGTSEATLARLDEPV
GALRIGLVTDPLFAAALSPDVLAALDDAARLAESLGHVVEPMRLPIDQARAAETFLTCWAAIVEPLVHDAQALTGRRPRG
DEFEPASRAMAQVGRHLARERLPLARDWQKQLIAQVESATARYDLVLCATLAAPPVRIGELRSTPFERAQMRLLAALPAR
PLLRMMLANTAKRAFAWAGCTELFNLTGQPAMSVPLHWNARGLPVGVQFAARRGDDARLLRFARQLELARPWFARRPPLV
PAAR

Sequences:

>Translated_484_residues
MQDDYPNYDATDLAALIATRRASAREVLDAAIARANALNPSINAIVLTDYDAARERAAAPPAGPLGGVPYLVKDLAAAAG
LRMSLGSRHYRYFVPDADAPFIARAKAAGANVFGKTSTAEFGQMPVTEPELFGPCRNPWNLDHTPGGSSGGAAAAVAAGI
VPLAHASDGGGSIRIPASCCGLFGFKPGYDPQLAAQPVPGDLIVNHAISRSVRDSALLFDLTTGRAGTSEATLARLDEPV
GALRIGLVTDPLFAAALSPDVLAALDDAARLAESLGHVVEPMRLPIDQARAAETFLTCWAAIVEPLVHDAQALTGRRPRG
DEFEPASRAMAQVGRHLARERLPLARDWQKQLIAQVESATARYDLVLCATLAAPPVRIGELRSTPFERAQMRLLAALPAR
PLLRMMLANTAKRAFAWAGCTELFNLTGQPAMSVPLHWNARGLPVGVQFAARRGDDARLLRFARQLELARPWFARRPPLV
PAAR
>Mature_484_residues
MQDDYPNYDATDLAALIATRRASAREVLDAAIARANALNPSINAIVLTDYDAARERAAAPPAGPLGGVPYLVKDLAAAAG
LRMSLGSRHYRYFVPDADAPFIARAKAAGANVFGKTSTAEFGQMPVTEPELFGPCRNPWNLDHTPGGSSGGAAAAVAAGI
VPLAHASDGGGSIRIPASCCGLFGFKPGYDPQLAAQPVPGDLIVNHAISRSVRDSALLFDLTTGRAGTSEATLARLDEPV
GALRIGLVTDPLFAAALSPDVLAALDDAARLAESLGHVVEPMRLPIDQARAAETFLTCWAAIVEPLVHDAQALTGRRPRG
DEFEPASRAMAQVGRHLARERLPLARDWQKQLIAQVESATARYDLVLCATLAAPPVRIGELRSTPFERAQMRLLAALPAR
PLLRMMLANTAKRAFAWAGCTELFNLTGQPAMSVPLHWNARGLPVGVQFAARRGDDARLLRFARQLELARPWFARRPPLV
PAAR

Specific function: Unknown

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family [H]

Homologues:

Organism=Homo sapiens, GI195972892, Length=193, Percent_Identity=33.6787564766839, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI222831590, Length=470, Percent_Identity=25.531914893617, Blast_Score=92, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17537465, Length=499, Percent_Identity=24.4488977955912, Blast_Score=99, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17543272, Length=467, Percent_Identity=24.4111349036403, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17556264, Length=474, Percent_Identity=25.7383966244726, Blast_Score=92, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17556276, Length=296, Percent_Identity=27.7027027027027, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17556278, Length=296, Percent_Identity=27.7027027027027, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648435, Length=490, Percent_Identity=25.5102040816327, Blast_Score=117, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24648437, Length=490, Percent_Identity=25.5102040816327, Blast_Score=117, Evalue=3e-26,
Organism=Drosophila melanogaster, GI45550774, Length=490, Percent_Identity=25.5102040816327, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI161078093, Length=513, Percent_Identity=24.9512670565302, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24644968, Length=243, Percent_Identity=30.0411522633745, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24648113, Length=456, Percent_Identity=28.5087719298246, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21356731, Length=192, Percent_Identity=32.8125, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24648441, Length=421, Percent_Identity=24.2280285035629, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24648439, Length=421, Percent_Identity=24.2280285035629, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24652985, Length=315, Percent_Identity=28.2539682539683, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI19922090, Length=315, Percent_Identity=28.2539682539683, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24652981, Length=315, Percent_Identity=28.2539682539683, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24652983, Length=315, Percent_Identity=28.2539682539683, Blast_Score=79, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000120
- InterPro:   IPR020556 [H]

Pfam domain/function: PF01425 Amidase [H]

EC number: =3.5.1.4 [H]

Molecular weight: Translated: 51515; Mature: 51515

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS00571 AMIDASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDDYPNYDATDLAALIATRRASAREVLDAAIARANALNPSINAIVLTDYDAARERAAAP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCC
PAGPLGGVPYLVKDLAAAAGLRMSLGSRHYRYFVPDADAPFIARAKAAGANVFGKTSTAE
CCCCCCCCHHHHHHHHHHHCHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCHH
FGQMPVTEPELFGPCRNPWNLDHTPGGSSGGAAAAVAAGIVPLAHASDGGGSIRIPASCC
HCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCEEEECHHHH
GLFGFKPGYDPQLAAQPVPGDLIVNHAISRSVRDSALLFDLTTGRAGTSEATLARLDEPV
HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHCCCC
GALRIGLVTDPLFAAALSPDVLAALDDAARLAESLGHVVEPMRLPIDQARAAETFLTCWA
CCEEEHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AIVEPLVHDAQALTGRRPRGDEFEPASRAMAQVGRHLARERLPLARDWQKQLIAQVESAT
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ARYDLVLCATLAAPPVRIGELRSTPFERAQMRLLAALPARPLLRMMLANTAKRAFAWAGC
HHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TELFNLTGQPAMSVPLHWNARGLPVGVQFAARRGDDARLLRFARQLELARPWFARRPPLV
HHHHHCCCCCCEECCEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCC
PAAR
CCCC
>Mature Secondary Structure
MQDDYPNYDATDLAALIATRRASAREVLDAAIARANALNPSINAIVLTDYDAARERAAAP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCC
PAGPLGGVPYLVKDLAAAAGLRMSLGSRHYRYFVPDADAPFIARAKAAGANVFGKTSTAE
CCCCCCCCHHHHHHHHHHHCHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCHH
FGQMPVTEPELFGPCRNPWNLDHTPGGSSGGAAAAVAAGIVPLAHASDGGGSIRIPASCC
HCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCEEEECHHHH
GLFGFKPGYDPQLAAQPVPGDLIVNHAISRSVRDSALLFDLTTGRAGTSEATLARLDEPV
HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHCCCC
GALRIGLVTDPLFAAALSPDVLAALDDAARLAESLGHVVEPMRLPIDQARAAETFLTCWA
CCEEEHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AIVEPLVHDAQALTGRRPRGDEFEPASRAMAQVGRHLARERLPLARDWQKQLIAQVESAT
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ARYDLVLCATLAAPPVRIGELRSTPFERAQMRLLAALPARPLLRMMLANTAKRAFAWAGC
HHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TELFNLTGQPAMSVPLHWNARGLPVGVQFAARRGDDARLLRFARQLELARPWFARRPPLV
HHHHHCCCCCCEECCEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCC
PAAR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]